RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 CCL23P55773 120 aa15.22■□□□□ 0.03
ABCF3-212ENST00000478288 NUCB1Q02818 461 aa15.22■□□□□ 0.03
ABCF3-212ENST00000478288 PTPN11Q06124 597 aaPredicted RBP15.22■□□□□ 0.03
ABCF3-212ENST00000478288 CHD1LQ86WJ1 897 aa15.22■□□□□ 0.03
ABCF3-212ENST00000478288 PLEKHM2Q8IWE5 1019 aa15.22■□□□□ 0.03
ABCF3-212ENST00000478288 VWCEQ96DN2 955 aa15.22■□□□□ 0.03
ABCF3-212ENST00000478288 GPHNQ9NQX3 736 aaPredicted RBP15.22■□□□□ 0.03
ABCF3-212ENST00000478288 TRMT13Q9NUP7 481 aaKnown RBP15.22■□□□□ 0.03
ABCF3-212ENST00000478288 PRRC2BQ5JSZ5 2229 aaKnown RBP15.21■□□□□ 0.03
ABCF3-212ENST00000478288 ABCB11O95342 1321 aa15.21■□□□□ 0.03
ABCF3-212ENST00000478288 TTLL4Q14679 1199 aa15.21■□□□□ 0.03
ABCF3-212ENST00000478288 ASPRV1Q53RT3 343 aa15.21■□□□□ 0.03
ABCF3-212ENST00000478288 OTOP2Q7RTS6 562 aa15.21■□□□□ 0.03
ABCF3-212ENST00000478288 USP38Q8NB14 1042 aa15.21■□□□□ 0.03
ABCF3-212ENST00000478288 PNMA1Q8ND90 353 aa15.21■□□□□ 0.03
ABCF3-212ENST00000478288 DSCC1Q9BVC3 393 aa15.21■□□□□ 0.03
ABCF3-212ENST00000478288 MYL3P08590 195 aa15.2■□□□□ 0.02
ABCF3-212ENST00000478288 CDC37Q16543 378 aaPredicted RBP15.2■□□□□ 0.02
ABCF3-212ENST00000478288 TJAP1Q5JTD0 557 aa15.2■□□□□ 0.02
ABCF3-212ENST00000478288 SLC28A3Q9HAS3 691 aa15.2■□□□□ 0.02
ABCF3-212ENST00000478288 DIAPH3Q9NSV4 1193 aa15.2■□□□□ 0.02
ABCF3-212ENST00000478288 PCDHA11Q9Y5I1 949 aa15.2■□□□□ 0.02
ABCF3-212ENST00000478288 SLC4A7Q9Y6M7 1214 aa15.2■□□□□ 0.02
ABCF3-212ENST00000478288 BRWD1Q9NSI6 2320 aa15.2■□□□□ 0.02
ABCF3-212ENST00000478288 KDM4AO75164 1064 aa15.19■□□□□ 0.02
ABCF3-212ENST00000478288 TXNP10599 105 aaKnown RBP15.19■□□□□ 0.02
ABCF3-212ENST00000478288 NBPF20Q3BBV1 942 aa15.19■□□□□ 0.02
ABCF3-212ENST00000478288 USH1GQ495M9 461 aa15.19■□□□□ 0.02
ABCF3-212ENST00000478288 CCDC62Q6P9F0 684 aa15.19■□□□□ 0.02
ABCF3-212ENST00000478288 CWC27Q6UX04 472 aaKnown RBP15.19■□□□□ 0.02
ABCF3-212ENST00000478288 SESTD1Q86VW0 696 aa15.19■□□□□ 0.02
ABCF3-212ENST00000478288 MCF2L2Q86YR7 1114 aa15.19■□□□□ 0.02
ABCF3-212ENST00000478288 ATXN2LQ8WWM7 1075 aaKnown RBP15.19■□□□□ 0.02
ABCF3-212ENST00000478288 IWS1Q96ST2 819 aa15.19■□□□□ 0.02
ABCF3-212ENST00000478288 ZSCAN10Q96SZ4 725 aaPredicted RBP15.19■□□□□ 0.02
ABCF3-212ENST00000478288 PRDM12Q9H4Q4 367 aa15.19■□□□□ 0.02
ABCF3-212ENST00000478288 KAT14Q9H8E8 782 aa15.19■□□□□ 0.02
ABCF3-212ENST00000478288 CTNNA3Q9UI47 895 aa15.19■□□□□ 0.02
ABCF3-212ENST00000478288 YBX2Q9Y2T7 364 aaKnown RBP15.19■□□□□ 0.02
ABCF3-212ENST00000478288 MYH7BA7E2Y1 1941 aa15.18■□□□□ 0.02
ABCF3-212ENST00000478288 GOLGA8HP0CJ92 632 aa15.18■□□□□ 0.02
ABCF3-212ENST00000478288 CYP2C9P11712 490 aa15.18■□□□□ 0.02
ABCF3-212ENST00000478288 ACTN1P12814 892 aa15.18■□□□□ 0.02
ABCF3-212ENST00000478288 ATP2A2P16615 1042 aaKnown RBP15.18■□□□□ 0.02
ABCF3-212ENST00000478288 GHRHRQ02643 423 aa15.18■□□□□ 0.02
ABCF3-212ENST00000478288 IMMTQ16891 758 aaKnown RBP15.18■□□□□ 0.02
ABCF3-212ENST00000478288 ADGRF4Q8IZF3 695 aa15.18■□□□□ 0.02
ABCF3-212ENST00000478288 ENAHQ8N8S7 591 aaPredicted RBP15.18■□□□□ 0.02
ABCF3-212ENST00000478288 SYTL5Q8TDW5 730 aaPredicted RBP15.18■□□□□ 0.02
ABCF3-212ENST00000478288 NSUN6Q8TEA1 469 aaKnown RBP15.18■□□□□ 0.02
ABCF3-212ENST00000478288 SCLYQ96I15 445 aa15.18■□□□□ 0.02
ABCF3-212ENST00000478288 ZKSCAN3Q9BRR0 538 aa15.18■□□□□ 0.02
ABCF3-212ENST00000478288 KRT23Q9C075 422 aa15.18■□□□□ 0.02
ABCF3-212ENST00000478288 UBA5Q9GZZ9 404 aa15.18■□□□□ 0.02
ABCF3-212ENST00000478288 NKX2-4Q9H2Z4 354 aa15.18■□□□□ 0.02
ABCF3-212ENST00000478288 CNNM2Q9H8M5 875 aa15.18■□□□□ 0.02
ABCF3-212ENST00000478288 BAZ2BQ9UIF8 2168 aaKnown RBP15.17■□□□□ 0.02
ABCF3-212ENST00000478288 ARIH2O95376 493 aa15.17■□□□□ 0.02
ABCF3-212ENST00000478288 BFSP2Q13515 415 aa15.17■□□□□ 0.02
ABCF3-212ENST00000478288 ADGRE1Q14246 886 aa15.17■□□□□ 0.02
ABCF3-212ENST00000478288 PPP2R2DQ66LE6 453 aa15.17■□□□□ 0.02
ABCF3-212ENST00000478288 B4GALNT3Q6L9W6 998 aa15.17■□□□□ 0.02
ABCF3-212ENST00000478288 PHOSPHO2Q8TCD6 241 aa15.17■□□□□ 0.02
ABCF3-212ENST00000478288 EMID1Q96A84 441 aaPredicted RBP15.17■□□□□ 0.02
ABCF3-212ENST00000478288 SLC9A7Q96T83 725 aa15.17■□□□□ 0.02
ABCF3-212ENST00000478288 ZSWIM5Q9P217 1185 aa15.17■□□□□ 0.02
ABCF3-212ENST00000478288 MRPL11Q9Y3B7 192 aaKnown RBP15.17■□□□□ 0.02
ABCF3-212ENST00000478288 B4E1Z4 1266 aa15.16■□□□□ 0.02
ABCF3-212ENST00000478288 GH1P01241 217 aa15.16■□□□□ 0.02
ABCF3-212ENST00000478288 IGHDP01880 384 aa15.16■□□□□ 0.02
ABCF3-212ENST00000478288 MMP3P08254 477 aa15.16■□□□□ 0.02
ABCF3-212ENST00000478288 PARP1P09874 1014 aaKnown RBP15.16■□□□□ 0.02
ABCF3-212ENST00000478288 IQCF3P0C7M6 154 aa15.16■□□□□ 0.02
ABCF3-212ENST00000478288 RBL2Q08999 1139 aa15.16■□□□□ 0.02
ABCF3-212ENST00000478288 STXBP2Q15833 593 aa15.16■□□□□ 0.02
ABCF3-212ENST00000478288 QRICH1Q2TAL8 776 aa15.16■□□□□ 0.02
ABCF3-212ENST00000478288 FAM47CQ5HY64 1035 aa15.16■□□□□ 0.02
ABCF3-212ENST00000478288 CAGE1Q8TC20 777 aa15.16■□□□□ 0.02
ABCF3-212ENST00000478288 COPS5Q92905 334 aa15.16■□□□□ 0.02
ABCF3-212ENST00000478288 RMDN3Q96TC7 470 aa15.16■□□□□ 0.02
ABCF3-212ENST00000478288 CPVLQ9H3G5 476 aa15.16■□□□□ 0.02
ABCF3-212ENST00000478288 MAP3K20Q9NYL2 800 aaKnown RBP15.16■□□□□ 0.02
ABCF3-212ENST00000478288 COL20A1Q9P218 1284 aa15.16■□□□□ 0.02
ABCF3-212ENST00000478288 THEGQ9P2T0 379 aa15.16■□□□□ 0.02
ABCF3-212ENST00000478288 ZBBXA8MT70 800 aa15.15■□□□□ 0.02
ABCF3-212ENST00000478288 BAIAP3O94812 1187 aa15.15■□□□□ 0.02
ABCF3-212ENST00000478288 PARNO95453 639 aaKnown RBP15.15■□□□□ 0.02
ABCF3-212ENST00000478288 ARHGAP1Q07960 439 aa15.15■□□□□ 0.02
ABCF3-212ENST00000478288 FBXO11Q86XK2 927 aa15.15■□□□□ 0.02
ABCF3-212ENST00000478288 SAMD3Q8N6K7 520 aa15.15■□□□□ 0.02
ABCF3-212ENST00000478288 CCDC155Q8N6L0 562 aa15.15■□□□□ 0.02
ABCF3-212ENST00000478288 RETREG2Q8NC44 543 aa15.15■□□□□ 0.02
ABCF3-212ENST00000478288 UBAC1Q9BSL1 405 aa15.15■□□□□ 0.02
ABCF3-212ENST00000478288 JMJD4Q9H9V9 463 aa15.15■□□□□ 0.02
ABCF3-212ENST00000478288 PRDM6Q9NQX0 595 aa15.15■□□□□ 0.02
ABCF3-212ENST00000478288 PTPRSQ13332 1948 aa15.15■□□□□ 0.02
ABCF3-212ENST00000478288 EIF3JO75822 258 aaKnown RBP15.14■□□□□ 0.01
ABCF3-212ENST00000478288 POU3F3P20264 500 aaPredicted RBP15.14■□□□□ 0.01
ABCF3-212ENST00000478288 HSD17B4P51659 736 aa15.14■□□□□ 0.01
ABCF3-212ENST00000478288 RABGGTBP53611 331 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms