RNA–Protein interactions for RNA: ENST00000478197.1

C2orf88-207, Transcript of chromosome 2 open reading frame 88, humanhuman

TSL 4

Gene C2orf88, Length 567 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-207ENST00000478197 MSL3Q8N5Y2 521 aaKnown RBP17.15■□□□□ 0.34
C2orf88-207ENST00000478197 NECAB1Q8N987 351 aa17.15■□□□□ 0.34
C2orf88-207ENST00000478197 CCDC148Q8NFR7 591 aa17.15■□□□□ 0.34
C2orf88-207ENST00000478197 PIGSQ96S52 555 aa17.15■□□□□ 0.34
C2orf88-207ENST00000478197 LBHD1Q9BQE6 289 aaPredicted RBP17.15■□□□□ 0.34
C2orf88-207ENST00000478197 SLC26A6Q9BXS9 759 aa17.15■□□□□ 0.34
C2orf88-207ENST00000478197 RAVER2Q9HCJ3 691 aaKnown RBP17.15■□□□□ 0.34
C2orf88-207ENST00000478197 VAT1LQ9HCJ6 419 aa17.15■□□□□ 0.34
C2orf88-207ENST00000478197 XPNPEP3Q9NQH7 507 aa17.15■□□□□ 0.34
C2orf88-207ENST00000478197 SZT2Q5T011 3432 aa17.15■□□□□ 0.34
C2orf88-207ENST00000478197 PTPDC1A2A3K4 754 aa17.14■□□□□ 0.33
C2orf88-207ENST00000478197 AKR1A1P14550 325 aa17.14■□□□□ 0.33
C2orf88-207ENST00000478197 RTP1P59025 263 aa17.14■□□□□ 0.33
C2orf88-207ENST00000478197 MDM2Q00987 491 aaPredicted RBP17.14■□□□□ 0.33
C2orf88-207ENST00000478197 LRRC41Q15345 812 aa17.14■□□□□ 0.33
C2orf88-207ENST00000478197 SLC39A5Q6ZMH5 540 aa17.14■□□□□ 0.33
C2orf88-207ENST00000478197 RAB11FIP4Q86YS3 637 aa17.14■□□□□ 0.33
C2orf88-207ENST00000478197 ANKRD35Q8N283 1001 aa17.14■□□□□ 0.33
C2orf88-207ENST00000478197 LRCH3Q96II8 777 aa17.14■□□□□ 0.33
C2orf88-207ENST00000478197 BARHL2Q9NY43 387 aa17.14■□□□□ 0.33
C2orf88-207ENST00000478197 ORC3Q9UBD5 711 aaPredicted RBP17.14■□□□□ 0.33
C2orf88-207ENST00000478197 DAXXQ9UER7 740 aaPredicted RBP17.14■□□□□ 0.33
C2orf88-207ENST00000478197 CCPG1Q9ULG6 757 aa17.14■□□□□ 0.33
C2orf88-207ENST00000478197 SMC3Q9UQE7 1217 aa17.14■□□□□ 0.33
C2orf88-207ENST00000478197 ATP11BQ9Y2G3 1177 aa17.14■□□□□ 0.33
C2orf88-207ENST00000478197 PCDHA1Q9Y5I3 950 aa17.14■□□□□ 0.33
C2orf88-207ENST00000478197 MYH6P13533 1939 aa17.13■□□□□ 0.33
C2orf88-207ENST00000478197 ESYT2A0FGR8 921 aa17.13■□□□□ 0.33
C2orf88-207ENST00000478197 CTDNEP1O95476 244 aa17.13■□□□□ 0.33
C2orf88-207ENST00000478197 CALML3P27482 149 aa17.13■□□□□ 0.33
C2orf88-207ENST00000478197 ADCYAP1R1P41586 468 aa17.13■□□□□ 0.33
C2orf88-207ENST00000478197 LRIT3Q3SXY7 679 aa17.13■□□□□ 0.33
C2orf88-207ENST00000478197 RNF180Q86T96 592 aa17.13■□□□□ 0.33
C2orf88-207ENST00000478197 HOMER1Q86YM7 354 aa17.13■□□□□ 0.33
C2orf88-207ENST00000478197 CCDC82Q8N4S0 544 aa17.13■□□□□ 0.33
C2orf88-207ENST00000478197 FAM184AQ8NB25 1140 aa17.13■□□□□ 0.33
C2orf88-207ENST00000478197 BICD2Q8TD16 824 aa17.13■□□□□ 0.33
C2orf88-207ENST00000478197 ZNF536O15090 1300 aa17.13■□□□□ 0.33
C2orf88-207ENST00000478197 SYNGAP1Q96PV0 1343 aa17.13■□□□□ 0.33
C2orf88-207ENST00000478197 DNAJC25-GNG10A0A024R161 153 aa17.12■□□□□ 0.33
C2orf88-207ENST00000478197 ZNF865P0CJ78 1059 aaPredicted RBP17.12■□□□□ 0.33
C2orf88-207ENST00000478197 TAL1P17542 331 aaPredicted RBP17.12■□□□□ 0.33
C2orf88-207ENST00000478197 GNA11P29992 359 aa17.12■□□□□ 0.33
C2orf88-207ENST00000478197 GHRHRQ02643 423 aa17.12■□□□□ 0.33
C2orf88-207ENST00000478197 TRIM29Q14134 588 aa17.12■□□□□ 0.33
C2orf88-207ENST00000478197 SLC35G1Q2M3R5 365 aa17.12■□□□□ 0.33
C2orf88-207ENST00000478197 MAMDC4Q6UXC1 1216 aa17.12■□□□□ 0.33
C2orf88-207ENST00000478197 ZNF467Q7Z7K2 595 aaPredicted RBP17.12■□□□□ 0.33
C2orf88-207ENST00000478197 PHKBQ93100 1093 aa17.12■□□□□ 0.33
C2orf88-207ENST00000478197 FERMT2Q96AC1 680 aa17.12■□□□□ 0.33
C2orf88-207ENST00000478197 ACAD9Q9H845 621 aa17.12■□□□□ 0.33
C2orf88-207ENST00000478197 DNAH12Q6ZR08 3092 aa17.12■□□□□ 0.33
C2orf88-207ENST00000478197 MRPL12P52815 198 aaKnown RBP17.11■□□□□ 0.33
C2orf88-207ENST00000478197 PKN1Q16512 942 aa17.11■□□□□ 0.33
C2orf88-207ENST00000478197 GPR153Q6NV75 609 aa17.11■□□□□ 0.33
C2orf88-207ENST00000478197 CMTR1Q8N1G2 835 aaKnown RBP17.11■□□□□ 0.33
C2orf88-207ENST00000478197 CPVLQ9H3G5 476 aa17.11■□□□□ 0.33
C2orf88-207ENST00000478197 TSHZ2Q9NRE2 1034 aa17.11■□□□□ 0.33
C2orf88-207ENST00000478197 HOMER2Q9NSB8 354 aa17.11■□□□□ 0.33
C2orf88-207ENST00000478197 PHF24Q9UPV7 400 aa17.11■□□□□ 0.33
C2orf88-207ENST00000478197 LOC102724159A0A0B4J2E5 919 aa17.1■□□□□ 0.33
C2orf88-207ENST00000478197 PGK1P00558 417 aa17.1■□□□□ 0.33
C2orf88-207ENST00000478197 ST3GAL1Q11201 340 aa17.1■□□□□ 0.33
C2orf88-207ENST00000478197 SNX17Q15036 470 aa17.1■□□□□ 0.33
C2orf88-207ENST00000478197 PWP2Q15269 919 aaKnown RBP17.1■□□□□ 0.33
C2orf88-207ENST00000478197 TRIM60Q495X7 471 aa17.1■□□□□ 0.33
C2orf88-207ENST00000478197 CCDC174Q6PII3 467 aa17.1■□□□□ 0.33
C2orf88-207ENST00000478197 HEATR3Q7Z4Q2 680 aa17.1■□□□□ 0.33
C2orf88-207ENST00000478197 TRERF1Q96PN7 1200 aa17.1■□□□□ 0.33
C2orf88-207ENST00000478197 ZMYND12Q9H0C1 365 aa17.1■□□□□ 0.33
C2orf88-207ENST00000478197 BRMS1Q9HCU9 246 aa17.1■□□□□ 0.33
C2orf88-207ENST00000478197 C6orf50Q9HD87 102 aa17.1■□□□□ 0.33
C2orf88-207ENST00000478197 PRDM5Q9NQX1 630 aaPredicted RBP17.1■□□□□ 0.33
C2orf88-207ENST00000478197 ZHX1Q9UKY1 873 aaPredicted RBP17.1■□□□□ 0.33
C2orf88-207ENST00000478197 FAM184BQ9ULE4 1060 aa17.1■□□□□ 0.33
C2orf88-207ENST00000478197 RBM19Q9Y4C8 960 aaKnown RBP17.1■□□□□ 0.33
C2orf88-207ENST00000478197 PIK3CDO00329 1044 aa17.09■□□□□ 0.33
C2orf88-207ENST00000478197 SNAI1O95863 264 aaPredicted RBP17.09■□□□□ 0.33
C2orf88-207ENST00000478197 ALAS1P13196 640 aa17.09■□□□□ 0.33
C2orf88-207ENST00000478197 NAPAP54920 295 aa17.09■□□□□ 0.33
C2orf88-207ENST00000478197 C1orf53Q5VUE5 145 aa17.09■□□□□ 0.33
C2orf88-207ENST00000478197 CUL5Q93034 780 aa17.09■□□□□ 0.33
C2orf88-207ENST00000478197 AGBL1Q96MI9 1066 aa17.09■□□□□ 0.33
C2orf88-207ENST00000478197 ALG1Q9BT22 464 aa17.09■□□□□ 0.33
C2orf88-207ENST00000478197 ABHD16BQ9H3Z7 469 aa17.09■□□□□ 0.33
C2orf88-207ENST00000478197 RNF146Q9NTX7 359 aa17.09■□□□□ 0.33
C2orf88-207ENST00000478197 LRRC37A2A6NM11 1700 aa17.08■□□□□ 0.32
C2orf88-207ENST00000478197 SYNRGQ9UMZ2 1314 aa17.08■□□□□ 0.32
C2orf88-207ENST00000478197 STXBP3O00186 592 aa17.08■□□□□ 0.32
C2orf88-207ENST00000478197 FOSP01100 380 aaPredicted RBP17.08■□□□□ 0.32
C2orf88-207ENST00000478197 FDPSP14324 419 aaKnown RBP17.08■□□□□ 0.32
C2orf88-207ENST00000478197 GJB2P29033 226 aa17.08■□□□□ 0.32
C2orf88-207ENST00000478197 SAFBQ15424 915 aaKnown RBP eCLIP17.08■□□□□ 0.32
C2orf88-207ENST00000478197 WWC2Q6AWC2 1192 aa17.08■□□□□ 0.32
C2orf88-207ENST00000478197 DAGLBQ8NCG7 672 aa17.08■□□□□ 0.32
C2orf88-207ENST00000478197 LENG1Q96BZ8 264 aaPredicted RBP17.08■□□□□ 0.32
C2orf88-207ENST00000478197 PSTPIP2Q9H939 334 aa17.08■□□□□ 0.32
C2orf88-207ENST00000478197 RIC8AQ9NPQ8 531 aa17.08■□□□□ 0.32
C2orf88-207ENST00000478197 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.08■□□□□ 0.32
C2orf88-207ENST00000478197 LAMA3Q16787 3333 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms