RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 RNF207Q6ZRF8 634 aa11.37□□□□□ -0.59
CCM2-210ENST00000478169 MICALL1Q8N3F8 863 aa11.37□□□□□ -0.59
CCM2-210ENST00000478169 RETREG2Q8NC44 543 aa11.37□□□□□ -0.59
CCM2-210ENST00000478169 OTUD7AQ8TE49 926 aaPredicted RBP11.37□□□□□ -0.59
CCM2-210ENST00000478169 SCFD2Q8WU76 684 aa11.37□□□□□ -0.59
CCM2-210ENST00000478169 CLEC4DQ8WXI8 215 aa11.37□□□□□ -0.59
CCM2-210ENST00000478169 C1QTNF1Q9BXJ1 281 aa11.37□□□□□ -0.59
CCM2-210ENST00000478169 MAF1Q9H063 256 aa11.37□□□□□ -0.59
CCM2-210ENST00000478169 HELLSQ9NRZ9 838 aa11.37□□□□□ -0.59
CCM2-210ENST00000478169 COG5Q9UP83 839 aa11.37□□□□□ -0.59
CCM2-210ENST00000478169 MTCH2Q9Y6C9 303 aa11.37□□□□□ -0.59
CCM2-210ENST00000478169 WDR19Q8NEZ3 1342 aa11.36□□□□□ -0.59
CCM2-210ENST00000478169 CALML3P27482 149 aa11.36□□□□□ -0.59
CCM2-210ENST00000478169 RPS6P62753 249 aaKnown RBP11.36□□□□□ -0.59
CCM2-210ENST00000478169 FAM47CQ5HY64 1035 aa11.36□□□□□ -0.59
CCM2-210ENST00000478169 VPS53Q5VIR6 699 aa11.36□□□□□ -0.59
CCM2-210ENST00000478169 SLC30A10Q6XR72 485 aa11.36□□□□□ -0.59
CCM2-210ENST00000478169 TICAM2Q86XR7 235 aa11.36□□□□□ -0.59
CCM2-210ENST00000478169 RGS22Q8NE09 1264 aa11.36□□□□□ -0.59
CCM2-210ENST00000478169 EVI5LQ96CN4 794 aa11.36□□□□□ -0.59
CCM2-210ENST00000478169 TTC14Q96N46 770 aa11.36□□□□□ -0.59
CCM2-210ENST00000478169 GPCPD1Q9NPB8 672 aa11.36□□□□□ -0.59
CCM2-210ENST00000478169 TOMM22Q9NS69 142 aa11.36□□□□□ -0.59
CCM2-210ENST00000478169 PTPRSQ13332 1948 aa11.36□□□□□ -0.59
CCM2-210ENST00000478169 FRMPD2Q68DX3 1309 aaPredicted RBP11.35□□□□□ -0.59
CCM2-210ENST00000478169 SALL3Q9BXA9 1300 aa11.35□□□□□ -0.59
CCM2-210ENST00000478169 BAIAP3O94812 1187 aa11.35□□□□□ -0.59
CCM2-210ENST00000478169 FGAP02671 866 aa11.35□□□□□ -0.59
CCM2-210ENST00000478169 SNHG28P0DPA3 235 aa11.35□□□□□ -0.59
CCM2-210ENST00000478169 TXNP10599 105 aaKnown RBP11.35□□□□□ -0.59
CCM2-210ENST00000478169 PDHBP11177 359 aa11.35□□□□□ -0.59
CCM2-210ENST00000478169 PCP11498 1178 aaKnown RBP11.35□□□□□ -0.59
CCM2-210ENST00000478169 TFF2Q03403 129 aa11.35□□□□□ -0.59
CCM2-210ENST00000478169 ZNF543Q08ER8 600 aa11.35□□□□□ -0.59
CCM2-210ENST00000478169 SKIV2LQ15477 1246 aaKnown RBP11.35□□□□□ -0.59
CCM2-210ENST00000478169 HERC6Q8IVU3 1022 aa11.35□□□□□ -0.59
CCM2-210ENST00000478169 FTOQ9C0B1 505 aaKnown RBP eCLIP11.35□□□□□ -0.59
CCM2-210ENST00000478169 PCDHB15Q9Y5E8 787 aa11.35□□□□□ -0.59
CCM2-210ENST00000478169 ZMYM6O95789 1325 aa11.35□□□□□ -0.59
CCM2-210ENST00000478169 RFXAPO00287 272 aa11.34□□□□□ -0.59
CCM2-210ENST00000478169 PARNO95453 639 aaKnown RBP11.34□□□□□ -0.59
CCM2-210ENST00000478169 PLA2G5P39877 138 aa11.34□□□□□ -0.59
CCM2-210ENST00000478169 TAP1Q03518 808 aa11.34□□□□□ -0.59
CCM2-210ENST00000478169 MCMDC2Q4G0Z9 681 aa11.34□□□□□ -0.59
CCM2-210ENST00000478169 RRP12Q5JTH9 1297 aaKnown RBP11.34□□□□□ -0.59
CCM2-210ENST00000478169 SESTD1Q86VW0 696 aa11.34□□□□□ -0.59
CCM2-210ENST00000478169 CCDC155Q8N6L0 562 aa11.34□□□□□ -0.59
CCM2-210ENST00000478169 CAGE1Q8TC20 777 aa11.34□□□□□ -0.59
CCM2-210ENST00000478169 COPS5Q92905 334 aa11.34□□□□□ -0.59
CCM2-210ENST00000478169 NECAB3Q96P71 396 aaPredicted RBP11.34□□□□□ -0.59
CCM2-210ENST00000478169 CERS4Q9HA82 394 aa11.34□□□□□ -0.59
CCM2-210ENST00000478169 ZBTB47Q9UFB7 747 aaPredicted RBP11.34□□□□□ -0.59
CCM2-210ENST00000478169 RAPGEFL1Q9UHV5 662 aa11.34□□□□□ -0.59
CCM2-210ENST00000478169 NOD1Q9Y239 953 aa11.34□□□□□ -0.59
CCM2-210ENST00000478169 EPOPA6NHQ4 379 aa11.33□□□□□ -0.6
CCM2-210ENST00000478169 HSPD1P10809 573 aaKnown RBP11.33□□□□□ -0.6
CCM2-210ENST00000478169 KCNJ6P48051 423 aa11.33□□□□□ -0.6
CCM2-210ENST00000478169 KCNQ1P51787 676 aa11.33□□□□□ -0.6
CCM2-210ENST00000478169 PTGISQ16647 500 aa11.33□□□□□ -0.6
CCM2-210ENST00000478169 GPATCH4Q5T3I0 446 aaKnown RBP11.33□□□□□ -0.6
CCM2-210ENST00000478169 MFSD6Q6ZSS7 791 aa11.33□□□□□ -0.6
CCM2-210ENST00000478169 AFAP1L1Q8TED9 768 aa11.33□□□□□ -0.6
CCM2-210ENST00000478169 ARNTL2Q8WYA1 636 aa11.33□□□□□ -0.6
CCM2-210ENST00000478169 TLL1O43897 1013 aa11.32□□□□□ -0.6
CCM2-210ENST00000478169 ARIH2O95376 493 aa11.32□□□□□ -0.6
CCM2-210ENST00000478169 NT5C2P49902 561 aa11.32□□□□□ -0.6
CCM2-210ENST00000478169 RBL2Q08999 1139 aa11.32□□□□□ -0.6
CCM2-210ENST00000478169 CCDC62Q6P9F0 684 aa11.32□□□□□ -0.6
CCM2-210ENST00000478169 DGKHQ86XP1 1220 aa11.32□□□□□ -0.6
CCM2-210ENST00000478169 HLA-CQ95604 372 aa11.32□□□□□ -0.6
CCM2-210ENST00000478169 FAM122AQ96E09 287 aa11.32□□□□□ -0.6
CCM2-210ENST00000478169 RNF41Q9H4P4 317 aaPredicted RBP11.32□□□□□ -0.6
CCM2-210ENST00000478169 LMCD1Q9NZU5 365 aa11.32□□□□□ -0.6
CCM2-210ENST00000478169 ARIH1Q9Y4X5 557 aaPredicted RBP11.32□□□□□ -0.6
CCM2-210ENST00000478169 XIRP2A4UGR9 3374 aa11.32□□□□□ -0.6
CCM2-210ENST00000478169 SIP14410 1827 aa11.32□□□□□ -0.6
CCM2-210ENST00000478169 COL4A4P53420 1690 aaPredicted RBP11.31□□□□□ -0.6
CCM2-210ENST00000478169 A0A0D9SFI3 127 aa11.31□□□□□ -0.6
CCM2-210ENST00000478169 LPXNO60711 386 aa11.31□□□□□ -0.6
CCM2-210ENST00000478169 ARHGEF15O94989 841 aa11.31□□□□□ -0.6
CCM2-210ENST00000478169 GH1P01241 217 aa11.31□□□□□ -0.6
CCM2-210ENST00000478169 MMP3P08254 477 aa11.31□□□□□ -0.6
CCM2-210ENST00000478169 SELPP16109 830 aa11.31□□□□□ -0.6
CCM2-210ENST00000478169 CASTP20810 708 aaKnown RBP11.31□□□□□ -0.6
CCM2-210ENST00000478169 PDE1AP54750 535 aa11.31□□□□□ -0.6
CCM2-210ENST00000478169 GRB10Q13322 594 aa11.31□□□□□ -0.6
CCM2-210ENST00000478169 USH1GQ495M9 461 aa11.31□□□□□ -0.6
CCM2-210ENST00000478169 CCDC178Q5BJE1 867 aa11.31□□□□□ -0.6
CCM2-210ENST00000478169 ANKRD45Q5TZF3 282 aa11.31□□□□□ -0.6
CCM2-210ENST00000478169 KRT40Q6A162 431 aa11.31□□□□□ -0.6
CCM2-210ENST00000478169 NSUN6Q8TEA1 469 aaKnown RBP11.31□□□□□ -0.6
CCM2-210ENST00000478169 PPP1R13LQ8WUF5 828 aa11.31□□□□□ -0.6
CCM2-210ENST00000478169 AFG1LQ8WV93 481 aa11.31□□□□□ -0.6
CCM2-210ENST00000478169 ESR2Q92731 530 aa11.31□□□□□ -0.6
CCM2-210ENST00000478169 FAM227BQ96M60 508 aa11.31□□□□□ -0.6
CCM2-210ENST00000478169 CTAGE1Q96RT6 745 aa11.31□□□□□ -0.6
CCM2-210ENST00000478169 IWS1Q96ST2 819 aa11.31□□□□□ -0.6
CCM2-210ENST00000478169 MICAL3Q7RTP6 2002 aa11.31□□□□□ -0.6
CCM2-210ENST00000478169 ABCB11O95342 1321 aa11.31□□□□□ -0.6
CCM2-210ENST00000478169 ABHD14A-ACY1A0A1B0GW23 586 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms