RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 IWS1Q96ST2 819 aa16.02■□□□□ 0.16
HDAC7-222ENST00000477937 RMDN3Q96TC7 470 aa16.02■□□□□ 0.16
HDAC7-222ENST00000477937 MAP3K20Q9NYL2 800 aaKnown RBP16.02■□□□□ 0.16
HDAC7-222ENST00000477937 PNMA6FA0A0J9YX94 578 aa16.01■□□□□ 0.15
HDAC7-222ENST00000477937 SOX1O00570 391 aaPredicted RBP16.01■□□□□ 0.15
HDAC7-222ENST00000477937 TLR3O15455 904 aaKnown RBP16.01■□□□□ 0.15
HDAC7-222ENST00000477937 CYTH3O43739 400 aa16.01■□□□□ 0.15
HDAC7-222ENST00000477937 PPP1R11O60927 126 aaPredicted RBP16.01■□□□□ 0.15
HDAC7-222ENST00000477937 DDAH1O94760 285 aa16.01■□□□□ 0.15
HDAC7-222ENST00000477937 TXNP10599 105 aaKnown RBP16.01■□□□□ 0.15
HDAC7-222ENST00000477937 KIF5BP33176 963 aa16.01■□□□□ 0.15
HDAC7-222ENST00000477937 LIFRP42702 1097 aa16.01■□□□□ 0.15
HDAC7-222ENST00000477937 HSD17B4P51659 736 aa16.01■□□□□ 0.15
HDAC7-222ENST00000477937 TTLL4Q14679 1199 aa16.01■□□□□ 0.15
HDAC7-222ENST00000477937 PPP2R5BQ15173 497 aa16.01■□□□□ 0.15
HDAC7-222ENST00000477937 STXBP2Q15833 593 aa16.01■□□□□ 0.15
HDAC7-222ENST00000477937 ARHGEF16Q5VV41 709 aa16.01■□□□□ 0.15
HDAC7-222ENST00000477937 OR6J1Q8NGC5 347 aa16.01■□□□□ 0.15
HDAC7-222ENST00000477937 LRCH3Q96II8 777 aa16.01■□□□□ 0.15
HDAC7-222ENST00000477937 SEZ6LQ9BYH1 1024 aa16.01■□□□□ 0.15
HDAC7-222ENST00000477937 GPHNQ9NQX3 736 aaPredicted RBP16.01■□□□□ 0.15
HDAC7-222ENST00000477937 COL20A1Q9P218 1284 aa16.01■□□□□ 0.15
HDAC7-222ENST00000477937 SH2B2O14492 632 aaPredicted RBP16■□□□□ 0.15
HDAC7-222ENST00000477937 OPLAHO14841 1288 aa16■□□□□ 0.15
HDAC7-222ENST00000477937 CALM1P0DP23 149 aa16■□□□□ 0.15
HDAC7-222ENST00000477937 CALM2P0DP24 149 aa16■□□□□ 0.15
HDAC7-222ENST00000477937 CALM3P0DP25 149 aa16■□□□□ 0.15
HDAC7-222ENST00000477937 CPT1AP50416 773 aa16■□□□□ 0.15
HDAC7-222ENST00000477937 GHRHRQ02643 423 aa16■□□□□ 0.15
HDAC7-222ENST00000477937 ITGA7Q13683 1181 aa16■□□□□ 0.15
HDAC7-222ENST00000477937 SLC35G1Q2M3R5 365 aa16■□□□□ 0.15
HDAC7-222ENST00000477937 BRDTQ58F21 947 aaPredicted RBP16■□□□□ 0.15
HDAC7-222ENST00000477937 LZTS2Q9BRK4 669 aa16■□□□□ 0.15
HDAC7-222ENST00000477937 MYL10Q9BUA6 226 aa16■□□□□ 0.15
HDAC7-222ENST00000477937 POLR3EQ9NVU0 708 aa16■□□□□ 0.15
HDAC7-222ENST00000477937 EIF2AK2P19525 551 aaKnown RBP15.99■□□□□ 0.15
HDAC7-222ENST00000477937 ITGB8P26012 769 aa15.99■□□□□ 0.15
HDAC7-222ENST00000477937 SMARCA1P28370 1054 aa15.99■□□□□ 0.15
HDAC7-222ENST00000477937 GNAQP50148 359 aa15.99■□□□□ 0.15
HDAC7-222ENST00000477937 GPR153Q6NV75 609 aa15.99■□□□□ 0.15
HDAC7-222ENST00000477937 SEPT14Q6ZU15 432 aa15.99■□□□□ 0.15
HDAC7-222ENST00000477937 FAM126BQ8IXS8 530 aa15.99■□□□□ 0.15
HDAC7-222ENST00000477937 SLC43A3Q8NBI5 491 aa15.99■□□□□ 0.15
HDAC7-222ENST00000477937 SPZ1Q9BXG8 430 aa15.99■□□□□ 0.15
HDAC7-222ENST00000477937 PXMP2Q9NR77 195 aa15.99■□□□□ 0.15
HDAC7-222ENST00000477937 GCOM1H8Y6P7 765 aaPredicted RBP15.98■□□□□ 0.15
HDAC7-222ENST00000477937 EIF3JO75822 258 aaKnown RBP15.98■□□□□ 0.15
HDAC7-222ENST00000477937 TIMP1P01033 207 aa15.98■□□□□ 0.15
HDAC7-222ENST00000477937 NR3C2P08235 984 aa15.98■□□□□ 0.15
HDAC7-222ENST00000477937 POLR2MP0CAP2 368 aa15.98■□□□□ 0.15
HDAC7-222ENST00000477937 COL9A3Q14050 684 aaPredicted RBP15.98■□□□□ 0.15
HDAC7-222ENST00000477937 TSGA10IPQ3SY00 556 aa15.98■□□□□ 0.15
HDAC7-222ENST00000477937 PIBF1Q8WXW3 757 aa15.98■□□□□ 0.15
HDAC7-222ENST00000477937 COPS5Q92905 334 aa15.98■□□□□ 0.15
HDAC7-222ENST00000477937 RRP36Q96EU6 259 aaKnown RBP15.98■□□□□ 0.15
HDAC7-222ENST00000477937 NEK1Q96PY6 1258 aa15.98■□□□□ 0.15
HDAC7-222ENST00000477937 LRRC2Q9BYS8 371 aa15.98■□□□□ 0.15
HDAC7-222ENST00000477937 TBX21Q9UL17 535 aa15.98■□□□□ 0.15
HDAC7-222ENST00000477937 SLC12A7Q9Y666 1083 aa15.98■□□□□ 0.15
HDAC7-222ENST00000477937 KPNA6O60684 536 aa15.97■□□□□ 0.15
HDAC7-222ENST00000477937 CD4P01730 458 aa15.97■□□□□ 0.15
HDAC7-222ENST00000477937 MYL3P08590 195 aa15.97■□□□□ 0.15
HDAC7-222ENST00000477937 HOXA13P31271 388 aaPredicted RBP15.97■□□□□ 0.15
HDAC7-222ENST00000477937 PURAQ00577 322 aaKnown RBP15.97■□□□□ 0.15
HDAC7-222ENST00000477937 FPGSQ05932 587 aa15.97■□□□□ 0.15
HDAC7-222ENST00000477937 KRT32Q14532 448 aa15.97■□□□□ 0.15
HDAC7-222ENST00000477937 SHHQ15465 462 aa15.97■□□□□ 0.15
HDAC7-222ENST00000477937 CCDC62Q6P9F0 684 aa15.97■□□□□ 0.15
HDAC7-222ENST00000477937 SYNE3Q6ZMZ3 975 aa15.97■□□□□ 0.15
HDAC7-222ENST00000477937 SEC63Q9UGP8 760 aaKnown RBP15.97■□□□□ 0.15
HDAC7-222ENST00000477937 SCN10AQ9Y5Y9 1956 aa15.96■□□□□ 0.15
HDAC7-222ENST00000477937 GRIN2DO15399 1336 aa15.96■□□□□ 0.15
HDAC7-222ENST00000477937 A6NJR5 290 aa15.96■□□□□ 0.15
HDAC7-222ENST00000477937 ARIH2O95376 493 aa15.96■□□□□ 0.15
HDAC7-222ENST00000477937 MYCLP12524 364 aaPredicted RBP15.96■□□□□ 0.15
HDAC7-222ENST00000477937 PSMC6P62333 389 aa15.96■□□□□ 0.15
HDAC7-222ENST00000477937 LY6KQ17RY6 165 aa15.96■□□□□ 0.15
HDAC7-222ENST00000477937 MFSD5Q6N075 450 aa15.96■□□□□ 0.15
HDAC7-222ENST00000477937 FCHSD1Q86WN1 690 aa15.96■□□□□ 0.15
HDAC7-222ENST00000477937 FANCBQ8NB91 859 aa15.96■□□□□ 0.15
HDAC7-222ENST00000477937 PDCD2LQ9BRP1 358 aa15.96■□□□□ 0.15
HDAC7-222ENST00000477937 MTG1Q9BT17 334 aaPredicted RBP15.96■□□□□ 0.15
HDAC7-222ENST00000477937 GH1P01241 217 aa15.95■□□□□ 0.14
HDAC7-222ENST00000477937 RXRAP19793 462 aa15.95■□□□□ 0.14
HDAC7-222ENST00000477937 EXOSC10Q01780 885 aaKnown RBP15.95■□□□□ 0.14
HDAC7-222ENST00000477937 PGM5Q15124 567 aa15.95■□□□□ 0.14
HDAC7-222ENST00000477937 C9orf50Q5SZB4 431 aa15.95■□□□□ 0.14
HDAC7-222ENST00000477937 DHX32Q7L7V1 743 aaKnown RBP15.95■□□□□ 0.14
HDAC7-222ENST00000477937 SGMS1Q86VZ5 419 aa15.95■□□□□ 0.14
HDAC7-222ENST00000477937 RASEFQ8IZ41 740 aa15.95■□□□□ 0.14
HDAC7-222ENST00000477937 TMEM199Q8N511 208 aa15.95■□□□□ 0.14
HDAC7-222ENST00000477937 SRBD1Q8N5C6 995 aaKnown RBP15.95■□□□□ 0.14
HDAC7-222ENST00000477937 DDX41Q9UJV9 622 aaKnown RBP15.95■□□□□ 0.14
HDAC7-222ENST00000477937 MRVI1Q9Y6F6 885 aa15.95■□□□□ 0.14
HDAC7-222ENST00000477937 SZT2Q5T011 3432 aa15.94■□□□□ 0.14
HDAC7-222ENST00000477937 B4GALT4O60513 344 aa15.94■□□□□ 0.14
HDAC7-222ENST00000477937 PLEKHA8P1O95397 391 aa15.94■□□□□ 0.14
HDAC7-222ENST00000477937 HMGB1P09429 215 aaKnown RBP15.94■□□□□ 0.14
HDAC7-222ENST00000477937 ADCK5Q3MIX3 580 aa15.94■□□□□ 0.14
HDAC7-222ENST00000477937 KCNV1Q6PIU1 500 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms