RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 BLIDQ8IZY5 108 aa22.86■■□□□ 1.25
ACTB-210ENST00000477812 BICD2Q8TD16 824 aa22.86■■□□□ 1.25
ACTB-210ENST00000477812 RASGRP4Q8TDF6 673 aa22.86■■□□□ 1.25
ACTB-210ENST00000477812 MORC4Q8TE76 937 aa22.86■■□□□ 1.25
ACTB-210ENST00000477812 TRIB2Q92519 343 aa22.86■■□□□ 1.25
ACTB-210ENST00000477812 RMDN3Q96TC7 470 aa22.86■■□□□ 1.25
ACTB-210ENST00000477812 PXMP2Q9NR77 195 aa22.86■■□□□ 1.25
ACTB-210ENST00000477812 SLC5A4Q9NY91 659 aa22.86■■□□□ 1.25
ACTB-210ENST00000477812 BIN2Q9UBW5 565 aaPredicted RBP22.86■■□□□ 1.25
ACTB-210ENST00000477812 PTPN22Q9Y2R2 807 aa22.86■■□□□ 1.25
ACTB-210ENST00000477812 PTCH2Q9Y6C5 1203 aa22.86■■□□□ 1.25
ACTB-210ENST00000477812 LOC102724159A0A0B4J2E5 919 aa22.85■■□□□ 1.25
ACTB-210ENST00000477812 ANP32AP39687 249 aaKnown RBP22.85■■□□□ 1.25
ACTB-210ENST00000477812 TRIM29Q14134 588 aa22.85■■□□□ 1.25
ACTB-210ENST00000477812 PWP2Q15269 919 aaKnown RBP22.85■■□□□ 1.25
ACTB-210ENST00000477812 ADD3Q9UEY8 706 aaKnown RBP22.85■■□□□ 1.25
ACTB-210ENST00000477812 PCDHA6Q9UN73 950 aa22.85■■□□□ 1.25
ACTB-210ENST00000477812 PCDHA8Q9Y5H6 950 aa22.85■■□□□ 1.25
ACTB-210ENST00000477812 DDX49Q9Y6V7 483 aaKnown RBP22.85■■□□□ 1.25
ACTB-210ENST00000477812 FOSP01100 380 aaPredicted RBP22.84■■□□□ 1.25
ACTB-210ENST00000477812 JAKMIP3Q5VZ66 844 aa22.84■■□□□ 1.25
ACTB-210ENST00000477812 DIS3L2Q8IYB7 885 aaKnown RBP22.84■■□□□ 1.25
ACTB-210ENST00000477812 MSL3Q8N5Y2 521 aaKnown RBP22.84■■□□□ 1.25
ACTB-210ENST00000477812 IL31RAQ8NI17 732 aa22.84■■□□□ 1.25
ACTB-210ENST00000477812 NSUN6Q8TEA1 469 aaKnown RBP22.84■■□□□ 1.25
ACTB-210ENST00000477812 CRYGNQ8WXF5 182 aa22.84■■□□□ 1.25
ACTB-210ENST00000477812 PDCD2LQ9BRP1 358 aa22.84■■□□□ 1.25
ACTB-210ENST00000477812 ADCY3O60266 1144 aa22.83■■□□□ 1.25
ACTB-210ENST00000477812 HSP90AA1P07900 732 aaKnown RBP22.83■■□□□ 1.25
ACTB-210ENST00000477812 KRT2P35908 639 aa22.83■■□□□ 1.25
ACTB-210ENST00000477812 MCTP2Q6DN12 878 aa22.83■■□□□ 1.25
ACTB-210ENST00000477812 RAET1EQ8TD07 263 aa22.83■■□□□ 1.25
ACTB-210ENST00000477812 PXYLP1Q8TE99 480 aa22.83■■□□□ 1.25
ACTB-210ENST00000477812 PGBD1Q96JS3 809 aa22.83■■□□□ 1.25
ACTB-210ENST00000477812 TINF2Q9BSI4 451 aa22.83■■□□□ 1.25
ACTB-210ENST00000477812 ANO3Q9BYT9 981 aa22.83■■□□□ 1.25
ACTB-210ENST00000477812 SYNGAP1Q96PV0 1343 aa22.82■■□□□ 1.24
ACTB-210ENST00000477812 MCM3APO60318 1980 aa22.82■■□□□ 1.24
ACTB-210ENST00000477812 SPDYE3A6NKU9 549 aa22.82■■□□□ 1.24
ACTB-210ENST00000477812 BTBD18B2RXH4 712 aa22.82■■□□□ 1.24
ACTB-210ENST00000477812 ELNP15502 786 aa22.82■■□□□ 1.24
ACTB-210ENST00000477812 EIF2AK2P19525 551 aaKnown RBP22.82■■□□□ 1.24
ACTB-210ENST00000477812 PDCP20941 246 aa22.82■■□□□ 1.24
ACTB-210ENST00000477812 SYT1P21579 422 aa22.82■■□□□ 1.24
ACTB-210ENST00000477812 SREBF1P36956 1147 aa22.82■■□□□ 1.24
ACTB-210ENST00000477812 NR5A1Q13285 461 aa22.82■■□□□ 1.24
ACTB-210ENST00000477812 LARP1BQ659C4 914 aaKnown RBP22.82■■□□□ 1.24
ACTB-210ENST00000477812 TRMT44Q8IYL2 757 aaKnown RBP22.82■■□□□ 1.24
ACTB-210ENST00000477812 SPRYD3Q8NCJ5 442 aa22.82■■□□□ 1.24
ACTB-210ENST00000477812 IWS1Q96ST2 819 aa22.82■■□□□ 1.24
ACTB-210ENST00000477812 CENPFP49454 3210 aa22.81■■□□□ 1.24
ACTB-210ENST00000477812 ASB14A6NK59 587 aa22.81■■□□□ 1.24
ACTB-210ENST00000477812 SNAI1O95863 264 aaPredicted RBP22.81■■□□□ 1.24
ACTB-210ENST00000477812 PGM5Q15124 567 aa22.81■■□□□ 1.24
ACTB-210ENST00000477812 PKN2Q16513 984 aaKnown RBP22.81■■□□□ 1.24
ACTB-210ENST00000477812 EARS2Q5JPH6 523 aaKnown RBP22.81■■□□□ 1.24
ACTB-210ENST00000477812 ARHGEF16Q5VV41 709 aa22.81■■□□□ 1.24
ACTB-210ENST00000477812 ARMCX2Q7L311 632 aa22.81■■□□□ 1.24
ACTB-210ENST00000477812 SLAIN1Q8ND83 568 aa22.81■■□□□ 1.24
ACTB-210ENST00000477812 KATNBL1Q9H079 304 aa22.81■■□□□ 1.24
ACTB-210ENST00000477812 KIF28PB7ZC32 967 aa22.8■■□□□ 1.24
ACTB-210ENST00000477812 EDIL3O43854 480 aa22.8■■□□□ 1.24
ACTB-210ENST00000477812 NR3C2P08235 984 aa22.8■■□□□ 1.24
ACTB-210ENST00000477812 CYP2C19P33261 490 aa22.8■■□□□ 1.24
ACTB-210ENST00000477812 FBXO46Q6PJ61 603 aaPredicted RBP22.8■■□□□ 1.24
ACTB-210ENST00000477812 VSIG10LQ86VR7 867 aa22.8■■□□□ 1.24
ACTB-210ENST00000477812 FOXP1Q9H334 677 aaPredicted RBP22.8■■□□□ 1.24
ACTB-210ENST00000477812 BRMS1Q9HCU9 246 aa22.8■■□□□ 1.24
ACTB-210ENST00000477812 FAM205CA6NFA0 338 aa22.79■■□□□ 1.24
ACTB-210ENST00000477812 HMGCRP04035 888 aa22.79■■□□□ 1.24
ACTB-210ENST00000477812 U2AF2P26368 475 aaKnown RBP eCLIP22.79■■□□□ 1.243e-17■□□□□ 9.4
ACTB-210ENST00000477812 GRK4P32298 578 aa22.79■■□□□ 1.24
ACTB-210ENST00000477812 UBXN2AP68543 259 aa22.79■■□□□ 1.24
ACTB-210ENST00000477812 MRPS9P82933 396 aaKnown RBP22.79■■□□□ 1.24
ACTB-210ENST00000477812 TRIM32Q13049 653 aa22.79■■□□□ 1.24
ACTB-210ENST00000477812 SAFBQ15424 915 aaKnown RBP eCLIP22.79■■□□□ 1.24
ACTB-210ENST00000477812 MAP3K21Q5TCX8 1036 aa22.79■■□□□ 1.24
ACTB-210ENST00000477812 PCNX4Q63HM2 1172 aa22.79■■□□□ 1.24
ACTB-210ENST00000477812 KRT25Q7Z3Z0 450 aa22.79■■□□□ 1.24
ACTB-210ENST00000477812 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.79■■□□□ 1.24
ACTB-210ENST00000477812 MTMR6Q9Y217 621 aa22.79■■□□□ 1.24
ACTB-210ENST00000477812 H3BQV1 296 aa22.78■■□□□ 1.24
ACTB-210ENST00000477812 ARHGAP4P98171 946 aa22.78■■□□□ 1.24
ACTB-210ENST00000477812 IFFO2Q5TF58 517 aa22.78■■□□□ 1.24
ACTB-210ENST00000477812 MYH7BA7E2Y1 1941 aa22.78■■□□□ 1.24
ACTB-210ENST00000477812 CYP3A4P08684 503 aa22.77■■□□□ 1.24
ACTB-210ENST00000477812 DDIT3P35638 169 aa22.77■■□□□ 1.24
ACTB-210ENST00000477812 PDE4DQ08499 809 aa22.77■■□□□ 1.24
ACTB-210ENST00000477812 NONOQ15233 471 aaKnown RBP eCLIP22.77■■□□□ 1.243e-11■■■■■ 39.9
ACTB-210ENST00000477812 XRRA1Q6P2D8 792 aa22.77■■□□□ 1.24
ACTB-210ENST00000477812 PIK3AP1Q6ZUJ8 805 aa22.77■■□□□ 1.24
ACTB-210ENST00000477812 EHMT1Q9H9B1 1298 aa22.77■■□□□ 1.24
ACTB-210ENST00000477812 STX6O43752 255 aa22.76■■□□□ 1.23
ACTB-210ENST00000477812 RGS20O76081 388 aa22.76■■□□□ 1.23
ACTB-210ENST00000477812 INHAP05111 366 aa22.76■■□□□ 1.23
ACTB-210ENST00000477812 CYBAP13498 195 aa22.76■■□□□ 1.23
ACTB-210ENST00000477812 CCND2P30279 289 aa22.76■■□□□ 1.23
ACTB-210ENST00000477812 MFSD14CQ5VZR4 134 aa22.76■■□□□ 1.23
ACTB-210ENST00000477812 NOSTRINQ8IVI9 506 aa22.76■■□□□ 1.23
ACTB-210ENST00000477812 TRPV1Q8NER1 839 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms