RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 IFT57Q9NWB7 429 aa7.66□□□□□ -1.18
LINC00173-202ENST00000477702 POLIQ9UNA4 740 aa7.66□□□□□ -1.18
LINC00173-202ENST00000477702 SUGT1Q9Y2Z0 365 aa7.66□□□□□ -1.18
LINC00173-202ENST00000477702 XIRP2A4UGR9 3374 aa7.66□□□□□ -1.18
LINC00173-202ENST00000477702 PHIPQ8WWQ0 1821 aa7.66□□□□□ -1.18
LINC00173-202ENST00000477702 C2CD2LO14523 706 aa7.65□□□□□ -1.18
LINC00173-202ENST00000477702 RAG1P15918 1043 aa7.65□□□□□ -1.18
LINC00173-202ENST00000477702 MAPK4P31152 587 aa7.65□□□□□ -1.18
LINC00173-202ENST00000477702 CYP2C19P33261 490 aa7.65□□□□□ -1.18
LINC00173-202ENST00000477702 ZEB1P37275 1124 aaPredicted RBP7.65□□□□□ -1.18
LINC00173-202ENST00000477702 GNAI1P63096 354 aa7.65□□□□□ -1.18
LINC00173-202ENST00000477702 FPGSQ05932 587 aa7.65□□□□□ -1.18
LINC00173-202ENST00000477702 DOCK1Q14185 1865 aa7.65□□□□□ -1.18
LINC00173-202ENST00000477702 FRMPD3Q5JV73 1810 aa7.65□□□□□ -1.18
LINC00173-202ENST00000477702 RAB44Q7Z6P3 723 aaPredicted RBP7.65□□□□□ -1.18
LINC00173-202ENST00000477702 PLEKHH3Q7Z736 793 aa7.65□□□□□ -1.18
LINC00173-202ENST00000477702 NPAS3Q8IXF0 933 aa7.65□□□□□ -1.18
LINC00173-202ENST00000477702 DNAAF4Q8WXU2 420 aa7.65□□□□□ -1.18
LINC00173-202ENST00000477702 SLC30A3Q99726 388 aa7.65□□□□□ -1.18
LINC00173-202ENST00000477702 PAGR1Q9BTK6 254 aa7.65□□□□□ -1.18
LINC00173-202ENST00000477702 PBX4Q9BYU1 374 aa7.65□□□□□ -1.18
LINC00173-202ENST00000477702 RBPJLQ9UBG7 517 aa7.65□□□□□ -1.18
LINC00173-202ENST00000477702 KCNMB2Q9Y691 235 aa7.65□□□□□ -1.18
LINC00173-202ENST00000477702 KBTBD13C9JR72 458 aa7.64□□□□□ -1.19
LINC00173-202ENST00000477702 PDGFAP04085 211 aa7.64□□□□□ -1.19
LINC00173-202ENST00000477702 VSIG8P0DPA2 414 aa7.64□□□□□ -1.19
LINC00173-202ENST00000477702 FGFR3P22607 806 aa7.64□□□□□ -1.19
LINC00173-202ENST00000477702 PRDX5P30044 214 aa7.64□□□□□ -1.19
LINC00173-202ENST00000477702 HERVK_113P62684 666 aa7.64□□□□□ -1.19
LINC00173-202ENST00000477702 ERVK-24P63145 666 aa7.64□□□□□ -1.19
LINC00173-202ENST00000477702 KRT76Q01546 638 aa7.64□□□□□ -1.19
LINC00173-202ENST00000477702 ATP2B2Q01814 1243 aa7.64□□□□□ -1.19
LINC00173-202ENST00000477702 MAP3K10Q02779 954 aa7.64□□□□□ -1.19
LINC00173-202ENST00000477702 PICALMQ13492 652 aa7.64□□□□□ -1.19
LINC00173-202ENST00000477702 LRRC24Q50LG9 513 aa7.64□□□□□ -1.19
LINC00173-202ENST00000477702 METTL24Q5JXM2 366 aa7.64□□□□□ -1.19
LINC00173-202ENST00000477702 WDR78Q5VTH9 848 aa7.64□□□□□ -1.19
LINC00173-202ENST00000477702 ARRDC4Q8NCT1 418 aa7.64□□□□□ -1.19
LINC00173-202ENST00000477702 EDC3Q96F86 508 aaKnown RBP7.64□□□□□ -1.19
LINC00173-202ENST00000477702 TRERF1Q96PN7 1200 aa7.64□□□□□ -1.19
LINC00173-202ENST00000477702 DDX4Q9NQI0 724 aaKnown RBP7.64□□□□□ -1.19
LINC00173-202ENST00000477702 ATXN7L1Q9ULK2 861 aaPredicted RBP7.64□□□□□ -1.19
LINC00173-202ENST00000477702 ZDBF2Q9HCK1 2354 aa7.64□□□□□ -1.19
LINC00173-202ENST00000477702 TRANK1O15050 2925 aa7.64□□□□□ -1.19
LINC00173-202ENST00000477702 DOCK2Q92608 1830 aa7.64□□□□□ -1.19
LINC00173-202ENST00000477702 UTYO14607 1347 aa7.63□□□□□ -1.19
LINC00173-202ENST00000477702 MROH5Q6ZUA9 1318 aa7.63□□□□□ -1.19
LINC00173-202ENST00000477702 SPTBN4Q9H254 2564 aa7.63□□□□□ -1.19
LINC00173-202ENST00000477702 RLFQ13129 1914 aa7.63□□□□□ -1.19
LINC00173-202ENST00000477702 F6X3S4 739 aa7.63□□□□□ -1.19
LINC00173-202ENST00000477702 SMIM22K7EJ46 135 aa7.63□□□□□ -1.19
LINC00173-202ENST00000477702 MSCO60682 206 aa7.63□□□□□ -1.19
LINC00173-202ENST00000477702 PQBP1O60828 265 aaKnown RBP7.63□□□□□ -1.19
LINC00173-202ENST00000477702 ENTPD3O75355 529 aa7.63□□□□□ -1.19
LINC00173-202ENST00000477702 CLTBP09497 229 aa7.63□□□□□ -1.19
LINC00173-202ENST00000477702 RRP1BQ14684 758 aaKnown RBP7.63□□□□□ -1.19
LINC00173-202ENST00000477702 SNX17Q15036 470 aa7.63□□□□□ -1.19
LINC00173-202ENST00000477702 ALKBH2Q6NS38 261 aa7.63□□□□□ -1.19
LINC00173-202ENST00000477702 FOXR1Q6PIV2 292 aa7.63□□□□□ -1.19
LINC00173-202ENST00000477702 WDR66Q8TBY9 1149 aa7.63□□□□□ -1.19
LINC00173-202ENST00000477702 TSR2Q969E8 191 aaKnown RBP7.63□□□□□ -1.19
LINC00173-202ENST00000477702 UIMC1Q96RL1 719 aa7.63□□□□□ -1.19
LINC00173-202ENST00000477702 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.63□□□□□ -1.19
LINC00173-202ENST00000477702 CHMP4AQ9BY43 222 aa7.63□□□□□ -1.19
LINC00173-202ENST00000477702 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.63□□□□□ -1.19
LINC00173-202ENST00000477702 MARK1Q9P0L2 795 aa7.63□□□□□ -1.19
LINC00173-202ENST00000477702 TACC3Q9Y6A5 838 aa7.63□□□□□ -1.19
LINC00173-202ENST00000477702 LOC285556D6RIA3 1793 aa7.63□□□□□ -1.19
LINC00173-202ENST00000477702 PLXNA1Q9UIW2 1896 aa7.62□□□□□ -1.19
LINC00173-202ENST00000477702 KIAA0355O15063 1070 aa7.62□□□□□ -1.19
LINC00173-202ENST00000477702 LDHBP07195 334 aaKnown RBP7.62□□□□□ -1.19
LINC00173-202ENST00000477702 MZF1P28698 734 aaPredicted RBP7.62□□□□□ -1.19
LINC00173-202ENST00000477702 NHLH1Q02575 133 aa7.62□□□□□ -1.19
LINC00173-202ENST00000477702 AAK1Q2M2I8 961 aa7.62□□□□□ -1.19
LINC00173-202ENST00000477702 KRT25Q7Z3Z0 450 aa7.62□□□□□ -1.19
LINC00173-202ENST00000477702 NPLOC4Q8TAT6 608 aa7.62□□□□□ -1.19
LINC00173-202ENST00000477702 IDI2Q9BXS1 227 aa7.62□□□□□ -1.19
LINC00173-202ENST00000477702 NKX2-4Q9H2Z4 354 aa7.62□□□□□ -1.19
LINC00173-202ENST00000477702 TMEM39AQ9NV64 488 aa7.62□□□□□ -1.19
LINC00173-202ENST00000477702 TMOD4Q9NZQ9 345 aa7.62□□□□□ -1.19
LINC00173-202ENST00000477702 ADAMTS8Q9UP79 889 aa7.62□□□□□ -1.19
LINC00173-202ENST00000477702 GRM8O00222 908 aa7.61□□□□□ -1.19
LINC00173-202ENST00000477702 PDE8BO95263 885 aa7.61□□□□□ -1.19
LINC00173-202ENST00000477702 CYBAP13498 195 aa7.61□□□□□ -1.19
LINC00173-202ENST00000477702 MAPK1P28482 360 aa7.61□□□□□ -1.19
LINC00173-202ENST00000477702 GMPRP36959 345 aa7.61□□□□□ -1.19
LINC00173-202ENST00000477702 SPEM2Q0P670 501 aa7.61□□□□□ -1.19
LINC00173-202ENST00000477702 WDR43Q15061 677 aaKnown RBP eCLIP7.61□□□□□ -1.19
LINC00173-202ENST00000477702 LRRC41Q15345 812 aa7.61□□□□□ -1.19
LINC00173-202ENST00000477702 C8orf34Q49A92 452 aa7.61□□□□□ -1.19
LINC00173-202ENST00000477702 BEND3Q5T5X7 828 aa7.61□□□□□ -1.19
LINC00173-202ENST00000477702 C16orf59Q7L2K0 433 aa7.61□□□□□ -1.19
LINC00173-202ENST00000477702 VGLL2Q8N8G2 317 aa7.61□□□□□ -1.19
LINC00173-202ENST00000477702 PIK3R5Q8WYR1 880 aa7.61□□□□□ -1.19
LINC00173-202ENST00000477702 CNTNAP3BQ96NU0 1288 aa7.61□□□□□ -1.19
LINC00173-202ENST00000477702 CNTNAP3Q9BZ76 1288 aa7.61□□□□□ -1.19
LINC00173-202ENST00000477702 GSX2Q9BZM3 304 aa7.61□□□□□ -1.19
LINC00173-202ENST00000477702 MSRAQ9UJ68 235 aa7.61□□□□□ -1.19
LINC00173-202ENST00000477702 BRPF3Q9ULD4 1205 aa7.61□□□□□ -1.19
LINC00173-202ENST00000477702 PHF24Q9UPV7 400 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms