RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 GNASQ5JWF2 1037 aa15.51■□□□□ 0.07
ACTN4-205ENST00000477174 C1orf53Q5VUE5 145 aa15.51■□□□□ 0.07
ACTN4-205ENST00000477174 CCSAPQ6IQ19 270 aaPredicted RBP15.51■□□□□ 0.07
ACTN4-205ENST00000477174 SLC39A5Q6ZMH5 540 aa15.51■□□□□ 0.07
ACTN4-205ENST00000477174 SCFD2Q8WU76 684 aa15.51■□□□□ 0.07
ACTN4-205ENST00000477174 WDR11Q9BZH6 1224 aa15.51■□□□□ 0.07
ACTN4-205ENST00000477174 AP5M1Q9H0R1 490 aa15.51■□□□□ 0.07
ACTN4-205ENST00000477174 PXMP2Q9NR77 195 aa15.51■□□□□ 0.07
ACTN4-205ENST00000477174 FAM217BQ9NTX9 383 aaPredicted RBP15.51■□□□□ 0.07
ACTN4-205ENST00000477174 CEP290O15078 2479 aa15.5■□□□□ 0.07
ACTN4-205ENST00000477174 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.5■□□□□ 0.07
ACTN4-205ENST00000477174 GOLGA8AA7E2F4 631 aa15.5■□□□□ 0.07
ACTN4-205ENST00000477174 GOLGA8BA8MQT2 603 aa15.5■□□□□ 0.07
ACTN4-205ENST00000477174 PIK3CDO00329 1044 aa15.5■□□□□ 0.07
ACTN4-205ENST00000477174 DYNC1LI2O43237 492 aaPredicted RBP15.5■□□□□ 0.07
ACTN4-205ENST00000477174 NR3C2P08235 984 aa15.5■□□□□ 0.07
ACTN4-205ENST00000477174 C6orf222P0C671 652 aaPredicted RBP15.5■□□□□ 0.07
ACTN4-205ENST00000477174 HOXA13P31271 388 aaPredicted RBP15.5■□□□□ 0.07
ACTN4-205ENST00000477174 METAP2P50579 478 aaKnown RBP eCLIP15.5■□□□□ 0.079e-10■■□□□ 11.8
ACTN4-205ENST00000477174 ACLYP53396 1101 aa15.5■□□□□ 0.07
ACTN4-205ENST00000477174 APOBRQ0VD83 1088 aa15.5■□□□□ 0.07
ACTN4-205ENST00000477174 FUT2Q10981 343 aa15.5■□□□□ 0.07
ACTN4-205ENST00000477174 KCNA10Q16322 511 aa15.5■□□□□ 0.07
ACTN4-205ENST00000477174 LRRC26Q2I0M4 334 aa15.5■□□□□ 0.07
ACTN4-205ENST00000477174 TEX2Q8IWB9 1127 aa15.5■□□□□ 0.07
ACTN4-205ENST00000477174 NAP1L2Q9ULW6 460 aaPredicted RBP15.5■□□□□ 0.07
ACTN4-205ENST00000477174 V9GY48 417 aaPredicted RBP15.5■□□□□ 0.07
ACTN4-205ENST00000477174 NKRFO15226 690 aaKnown RBP eCLIP15.49■□□□□ 0.07
ACTN4-205ENST00000477174 EIF2AK2P19525 551 aaKnown RBP15.49■□□□□ 0.07
ACTN4-205ENST00000477174 CDC27P30260 824 aa15.49■□□□□ 0.07
ACTN4-205ENST00000477174 ADD1P35611 737 aaKnown RBP15.49■□□□□ 0.07
ACTN4-205ENST00000477174 TLK2Q86UE8 772 aa15.49■□□□□ 0.07
ACTN4-205ENST00000477174 VSIG10LQ86VR7 867 aa15.49■□□□□ 0.07
ACTN4-205ENST00000477174 CUL5Q93034 780 aa15.49■□□□□ 0.07
ACTN4-205ENST00000477174 FERMT2Q96AC1 680 aa15.49■□□□□ 0.07
ACTN4-205ENST00000477174 PSTPIP2Q9H939 334 aa15.49■□□□□ 0.07
ACTN4-205ENST00000477174 hCG_1642624A0A1W2PR95 340 aa15.48■□□□□ 0.07
ACTN4-205ENST00000477174 CTAGE5O15320 804 aa15.48■□□□□ 0.07
ACTN4-205ENST00000477174 ZEB2O60315 1214 aa15.48■□□□□ 0.07
ACTN4-205ENST00000477174 PDIA3P30101 505 aaKnown RBP15.48■□□□□ 0.07
ACTN4-205ENST00000477174 ATN1P54259 1190 aaPredicted RBP15.48■□□□□ 0.07
ACTN4-205ENST00000477174 TTLL4Q14679 1199 aa15.48■□□□□ 0.07
ACTN4-205ENST00000477174 SNX17Q15036 470 aa15.48■□□□□ 0.07
ACTN4-205ENST00000477174 FSCN1Q16658 493 aaKnown RBP15.48■□□□□ 0.07
ACTN4-205ENST00000477174 FCHSD1Q86WN1 690 aa15.48■□□□□ 0.07
ACTN4-205ENST00000477174 C7orf61Q8IZ16 206 aa15.48■□□□□ 0.07
ACTN4-205ENST00000477174 IL17RAQ96F46 866 aa15.48■□□□□ 0.07
ACTN4-205ENST00000477174 GLT1D1Q96MS3 346 aa15.48■□□□□ 0.07
ACTN4-205ENST00000477174 PDCD2LQ9BRP1 358 aa15.48■□□□□ 0.07
ACTN4-205ENST00000477174 ELP1O95163 1332 aa15.47■□□□□ 0.07
ACTN4-205ENST00000477174 A0A1W2PQ45 241 aaPredicted RBP15.47■□□□□ 0.07
ACTN4-205ENST00000477174 A0A1W2PQY0 241 aa15.47■□□□□ 0.07
ACTN4-205ENST00000477174 MYADML2A6NDP7 307 aa15.47■□□□□ 0.07
ACTN4-205ENST00000477174 hCG_1984214I3L0E3 225 aa15.47■□□□□ 0.07
ACTN4-205ENST00000477174 MEIS2O14770 477 aa15.47■□□□□ 0.07
ACTN4-205ENST00000477174 CABYRO75952 493 aa15.47■□□□□ 0.07
ACTN4-205ENST00000477174 ASGR1P07306 291 aa15.47■□□□□ 0.07
ACTN4-205ENST00000477174 TXNP10599 105 aaKnown RBP15.47■□□□□ 0.07
ACTN4-205ENST00000477174 TOB2Q14106 344 aaPredicted RBP15.47■□□□□ 0.07
ACTN4-205ENST00000477174 PGM5Q15124 567 aa15.47■□□□□ 0.07
ACTN4-205ENST00000477174 TMEM63BQ5T3F8 832 aa15.47■□□□□ 0.07
ACTN4-205ENST00000477174 CCDC62Q6P9F0 684 aa15.47■□□□□ 0.07
ACTN4-205ENST00000477174 HEATR3Q7Z4Q2 680 aa15.47■□□□□ 0.07
ACTN4-205ENST00000477174 ZNF713Q8N859 430 aaPredicted RBP15.47■□□□□ 0.07
ACTN4-205ENST00000477174 SMARCC2Q8TAQ2 1214 aa15.47■□□□□ 0.07
ACTN4-205ENST00000477174 ZNF274Q96GC6 653 aaPredicted RBP15.47■□□□□ 0.07
ACTN4-205ENST00000477174 UPF3BQ9BZI7 483 aaKnown RBP15.47■□□□□ 0.07
ACTN4-205ENST00000477174 ALDH8A1Q9H2A2 487 aaPredicted RBP15.47■□□□□ 0.07
ACTN4-205ENST00000477174 PDRG1Q9NUG6 133 aa15.47■□□□□ 0.07
ACTN4-205ENST00000477174 RBM27Q9P2N5 1060 aaKnown RBP15.47■□□□□ 0.07
ACTN4-205ENST00000477174 CNTNAP5Q8WYK1 1306 aa15.46■□□□□ 0.07
ACTN4-205ENST00000477174 MCM3APO60318 1980 aa15.46■□□□□ 0.07
ACTN4-205ENST00000477174 RTP1P59025 263 aa15.46■□□□□ 0.07
ACTN4-205ENST00000477174 IRX5P78411 483 aaPredicted RBP15.46■□□□□ 0.07
ACTN4-205ENST00000477174 BEX3Q00994 111 aa15.46■□□□□ 0.07
ACTN4-205ENST00000477174 BRDTQ58F21 947 aaPredicted RBP15.46■□□□□ 0.07
ACTN4-205ENST00000477174 XRRA1Q6P2D8 792 aa15.46■□□□□ 0.07
ACTN4-205ENST00000477174 KCNV1Q6PIU1 500 aa15.46■□□□□ 0.07
ACTN4-205ENST00000477174 USP17L6PQ6QN14 398 aa15.46■□□□□ 0.07
ACTN4-205ENST00000477174 SEPT14Q6ZU15 432 aa15.46■□□□□ 0.07
ACTN4-205ENST00000477174 STARD7Q9NQZ5 370 aa15.46■□□□□ 0.07
ACTN4-205ENST00000477174 NID2Q14112 1375 aa15.46■□□□□ 0.07
ACTN4-205ENST00000477174 PRPF3O43395 683 aaKnown RBP15.45■□□□□ 0.06
ACTN4-205ENST00000477174 STAM2O75886 525 aa15.45■□□□□ 0.06
ACTN4-205ENST00000477174 SEC24BO95487 1268 aa15.45■□□□□ 0.06
ACTN4-205ENST00000477174 TGFB3P10600 412 aa15.45■□□□□ 0.06
ACTN4-205ENST00000477174 MYCLP12524 364 aaPredicted RBP15.45■□□□□ 0.06
ACTN4-205ENST00000477174 CCND2P30279 289 aa15.45■□□□□ 0.06
ACTN4-205ENST00000477174 CPT1AP50416 773 aa15.45■□□□□ 0.06
ACTN4-205ENST00000477174 WWC2Q6AWC2 1192 aa15.45■□□□□ 0.06
ACTN4-205ENST00000477174 PPP1R18Q6NYC8 613 aa15.45■□□□□ 0.06
ACTN4-205ENST00000477174 VTI1AQ96AJ9 217 aa15.45■□□□□ 0.06
ACTN4-205ENST00000477174 TOX2Q96NM4 488 aa15.45■□□□□ 0.06
ACTN4-205ENST00000477174 SEZ6LQ9BYH1 1024 aa15.45■□□□□ 0.06
ACTN4-205ENST00000477174 GLT8D2Q9H1C3 349 aa15.45■□□□□ 0.06
ACTN4-205ENST00000477174 BARHL2Q9NY43 387 aa15.45■□□□□ 0.06
ACTN4-205ENST00000477174 ATP11BQ9Y2G3 1177 aa15.45■□□□□ 0.06
ACTN4-205ENST00000477174 FRMPD4Q14CM0 1322 aa15.44■□□□□ 0.06
ACTN4-205ENST00000477174 A6NJR5 290 aa15.44■□□□□ 0.06
ACTN4-205ENST00000477174 KPNA6O60684 536 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms