RNA–Protein interactions for RNA: ENST00000477155.5

CCDC30-209, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 3,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-209ENST00000477155 MYL5Q02045 173 aa7.47□□□□□ -1.21
CCDC30-209ENST00000477155 AP3B2Q13367 1082 aa7.47□□□□□ -1.21
CCDC30-209ENST00000477155 SUPT20HL1Q3ZLR7 823 aa7.47□□□□□ -1.21
CCDC30-209ENST00000477155 DPY19L2Q6NUT2 758 aa7.47□□□□□ -1.21
CCDC30-209ENST00000477155 CCDC186Q7Z3E2 898 aa7.47□□□□□ -1.21
CCDC30-209ENST00000477155 ZSCAN30Q86W11 494 aa7.47□□□□□ -1.21
CCDC30-209ENST00000477155 PLA2G4DQ86XP0 818 aa7.47□□□□□ -1.21
CCDC30-209ENST00000477155 SULF1Q8IWU6 871 aa7.47□□□□□ -1.21
CCDC30-209ENST00000477155 MLKLQ8NB16 471 aa7.47□□□□□ -1.21
CCDC30-209ENST00000477155 ZNF280CQ8ND82 737 aa7.47□□□□□ -1.21
CCDC30-209ENST00000477155 SNX29Q8TEQ0 813 aa7.47□□□□□ -1.21
CCDC30-209ENST00000477155 HOOK2Q96ED9 719 aa7.47□□□□□ -1.21
CCDC30-209ENST00000477155 GSDMAQ96QA5 445 aa7.47□□□□□ -1.21
CCDC30-209ENST00000477155 BPIFA3Q9BQP9 254 aa7.47□□□□□ -1.21
CCDC30-209ENST00000477155 PYM1Q9BRP8 204 aaKnown RBP7.47□□□□□ -1.21
CCDC30-209ENST00000477155 ADARB2Q9NS39 739 aaKnown RBP7.47□□□□□ -1.21
CCDC30-209ENST00000477155 WDR46O15213 610 aaKnown RBP7.47□□□□□ -1.21
CCDC30-209ENST00000477155 GTPBP6O43824 516 aaPredicted RBP7.47□□□□□ -1.21
CCDC30-209ENST00000477155 FOSP01100 380 aaPredicted RBP7.47□□□□□ -1.21
CCDC30-209ENST00000477155 RPN1P04843 607 aaKnown RBP7.47□□□□□ -1.21
CCDC30-209ENST00000477155 BACE1P56817 501 aa7.47□□□□□ -1.21
CCDC30-209ENST00000477155 KRT79Q5XKE5 535 aa7.47□□□□□ -1.21
CCDC30-209ENST00000477155 FILIP1Q7Z7B0 1213 aa7.47□□□□□ -1.21
CCDC30-209ENST00000477155 CREBRFQ8IUR6 639 aa7.47□□□□□ -1.21
CCDC30-209ENST00000477155 LPAR1Q92633 364 aa7.47□□□□□ -1.21
CCDC30-209ENST00000477155 WNK4Q96J92 1243 aa7.47□□□□□ -1.21
CCDC30-209ENST00000477155 RAB34Q9BZG1 259 aa7.47□□□□□ -1.21
CCDC30-209ENST00000477155 MRPL11Q9Y3B7 192 aaKnown RBP7.47□□□□□ -1.21
CCDC30-209ENST00000477155 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.47□□□□□ -1.21
CCDC30-209ENST00000477155 NFIBO00712 420 aa7.46□□□□□ -1.21
CCDC30-209ENST00000477155 USP2O75604 605 aaPredicted RBP7.46□□□□□ -1.21
CCDC30-209ENST00000477155 GCFC2P16383 781 aaKnown RBP7.46□□□□□ -1.21
CCDC30-209ENST00000477155 CDK11BP21127 795 aaKnown RBP7.46□□□□□ -1.21
CCDC30-209ENST00000477155 PTGS1P23219 599 aa7.46□□□□□ -1.21
CCDC30-209ENST00000477155 FXR2P51116 673 aaKnown RBP eCLIP7.46□□□□□ -1.21
CCDC30-209ENST00000477155 GRB10Q13322 594 aa7.46□□□□□ -1.21
CCDC30-209ENST00000477155 ECM1Q16610 540 aa7.46□□□□□ -1.21
CCDC30-209ENST00000477155 TRIML1Q8N9V2 468 aa7.46□□□□□ -1.21
CCDC30-209ENST00000477155 CNKSR2Q8WXI2 1034 aa7.46□□□□□ -1.21
CCDC30-209ENST00000477155 MED15Q96RN5 788 aa7.46□□□□□ -1.21
CCDC30-209ENST00000477155 XPO4Q9C0E2 1151 aaKnown RBP7.46□□□□□ -1.21
CCDC30-209ENST00000477155 HSD3B7Q9H2F3 369 aa7.46□□□□□ -1.21
CCDC30-209ENST00000477155 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.46□□□□□ -1.21
CCDC30-209ENST00000477155 GDAQ9Y2T3 454 aa7.46□□□□□ -1.21
CCDC30-209ENST00000477155 NFE2L3Q9Y4A8 694 aa7.46□□□□□ -1.21
CCDC30-209ENST00000477155 SERPINC1P01008 464 aa7.46□□□□□ -1.22
CCDC30-209ENST00000477155 SSBP05455 408 aaKnown RBP eCLIP7.46□□□□□ -1.22
CCDC30-209ENST00000477155 ORC2Q13416 577 aaPredicted RBP7.46□□□□□ -1.22
CCDC30-209ENST00000477155 PDIA5Q14554 519 aa7.46□□□□□ -1.22
CCDC30-209ENST00000477155 MCM6Q14566 821 aa7.46□□□□□ -1.22
CCDC30-209ENST00000477155 EAPPQ56P03 285 aaPredicted RBP7.46□□□□□ -1.22
CCDC30-209ENST00000477155 MOB2Q70IA6 237 aa7.46□□□□□ -1.22
CCDC30-209ENST00000477155 DYMQ7RTS9 669 aa7.46□□□□□ -1.22
CCDC30-209ENST00000477155 KRT26Q7Z3Y9 468 aa7.46□□□□□ -1.22
CCDC30-209ENST00000477155 ATG4CQ96DT6 458 aa7.46□□□□□ -1.22
CCDC30-209ENST00000477155 SAMSN1Q9NSI8 373 aaKnown RBP7.46□□□□□ -1.22
CCDC30-209ENST00000477155 ZNF112Q9UJU3 913 aa7.46□□□□□ -1.22
CCDC30-209ENST00000477155 ZNF536O15090 1300 aa7.46□□□□□ -1.22
CCDC30-209ENST00000477155 IKBKBO14920 756 aa7.46□□□□□ -1.22
CCDC30-209ENST00000477155 PLA2G6O60733 806 aa7.46□□□□□ -1.22
CCDC30-209ENST00000477155 ICAM1P05362 532 aa7.46□□□□□ -1.22
CCDC30-209ENST00000477155 SREBF1P36956 1147 aa7.46□□□□□ -1.22
CCDC30-209ENST00000477155 CCT6AP40227 531 aaKnown RBP7.46□□□□□ -1.22
CCDC30-209ENST00000477155 FANCCQ00597 558 aa7.46□□□□□ -1.22
CCDC30-209ENST00000477155 TRAF1Q13077 416 aa7.46□□□□□ -1.22
CCDC30-209ENST00000477155 KCNK18Q7Z418 384 aa7.46□□□□□ -1.22
CCDC30-209ENST00000477155 FAM43AQ8N2R8 423 aa7.46□□□□□ -1.22
CCDC30-209ENST00000477155 PNMA5Q96PV4 448 aa7.46□□□□□ -1.22
CCDC30-209ENST00000477155 AS3MTQ9HBK9 375 aa7.46□□□□□ -1.22
CCDC30-209ENST00000477155 KBTBD4Q9NVX7 518 aa7.46□□□□□ -1.22
CCDC30-209ENST00000477155 DACH1Q9UI36 760 aa7.46□□□□□ -1.22
CCDC30-209ENST00000477155 SBF1O95248 1867 aa7.46□□□□□ -1.22
CCDC30-209ENST00000477155 GOLGA6L6A8MZA4 724 aa7.45□□□□□ -1.22
CCDC30-209ENST00000477155 USP14P54578 494 aa7.45□□□□□ -1.22
CCDC30-209ENST00000477155 ASIC1P78348 528 aa7.45□□□□□ -1.22
CCDC30-209ENST00000477155 TTLL12Q14166 644 aaPredicted RBP7.45□□□□□ -1.22
CCDC30-209ENST00000477155 CCDC144BQ3MJ40 725 aa7.45□□□□□ -1.22
CCDC30-209ENST00000477155 KMT5BQ4FZB7 885 aa7.45□□□□□ -1.22
CCDC30-209ENST00000477155 HS1BP3Q53T59 392 aa7.45□□□□□ -1.22
CCDC30-209ENST00000477155 MUM1L1Q5H9M0 696 aa7.45□□□□□ -1.22
CCDC30-209ENST00000477155 NCAPH2Q6IBW4 605 aa7.45□□□□□ -1.22
CCDC30-209ENST00000477155 SARM1Q6SZW1 724 aa7.45□□□□□ -1.22
CCDC30-209ENST00000477155 CRYGNQ8WXF5 182 aa7.45□□□□□ -1.22
CCDC30-209ENST00000477155 HPS3Q969F9 1004 aa7.45□□□□□ -1.22
CCDC30-209ENST00000477155 ZKSCAN5Q9Y2L8 839 aa7.45□□□□□ -1.22
CCDC30-209ENST00000477155 PPP1R3GB7ZBB8 358 aa7.45□□□□□ -1.22
CCDC30-209ENST00000477155 PIK3CDO00329 1044 aa7.45□□□□□ -1.22
CCDC30-209ENST00000477155 UBASH3AP57075 661 aa7.45□□□□□ -1.22
CCDC30-209ENST00000477155 ARID5BQ14865 1188 aa7.45□□□□□ -1.22
CCDC30-209ENST00000477155 NSMFQ6X4W1 530 aa7.45□□□□□ -1.22
CCDC30-209ENST00000477155 SV2BQ7L1I2 683 aa7.45□□□□□ -1.22
CCDC30-209ENST00000477155 C17orf53Q8N3J3 647 aaPredicted RBP7.45□□□□□ -1.22
CCDC30-209ENST00000477155 EEF2KMTQ96G04 330 aa7.45□□□□□ -1.22
CCDC30-209ENST00000477155 PURBQ96QR8 312 aaKnown RBP7.45□□□□□ -1.22
CCDC30-209ENST00000477155 KCNMB3Q9NPA1 279 aa7.45□□□□□ -1.22
CCDC30-209ENST00000477155 PKD2L1Q9P0L9 805 aa7.45□□□□□ -1.22
CCDC30-209ENST00000477155 PPP1R9AQ9ULJ8 1098 aa7.45□□□□□ -1.22
CCDC30-209ENST00000477155 KIAA1024Q9UPX6 916 aa7.45□□□□□ -1.22
CCDC30-209ENST00000477155 CTNND2Q9UQB3 1225 aa7.45□□□□□ -1.22
CCDC30-209ENST00000477155 CYP3A7-CYP3A51PA0A087WV96 503 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms