RNA–Protein interactions for RNA: ENST00000476658.5

DFFA-203, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 3

Gene DFFA, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-203ENST00000476658 NID2Q14112 1375 aa17.34■□□□□ 0.37
DFFA-203ENST00000476658 LRRC41Q15345 812 aa17.34■□□□□ 0.37
DFFA-203ENST00000476658 RNF180Q86T96 592 aa17.34■□□□□ 0.37
DFFA-203ENST00000476658 DPF3Q92784 378 aa17.34■□□□□ 0.37
DFFA-203ENST00000476658 GPKOWQ92917 476 aaPredicted RBP eCLIP17.34■□□□□ 0.37
DFFA-203ENST00000476658 CUL5Q93034 780 aa17.34■□□□□ 0.37
DFFA-203ENST00000476658 PXMP2Q9NR77 195 aa17.34■□□□□ 0.37
DFFA-203ENST00000476658 SYNRGQ9UMZ2 1314 aa17.33■□□□□ 0.36
DFFA-203ENST00000476658 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.33■□□□□ 0.36
DFFA-203ENST00000476658 TAPT1Q6NXT6 567 aa17.33■□□□□ 0.36
DFFA-203ENST00000476658 SMARCC2Q8TAQ2 1214 aa17.33■□□□□ 0.36
DFFA-203ENST00000476658 IWS1Q96ST2 819 aa17.33■□□□□ 0.36
DFFA-203ENST00000476658 SPC25Q9HBM1 224 aa17.33■□□□□ 0.36
DFFA-203ENST00000476658 NCOA5Q9HCD5 579 aaKnown RBP17.33■□□□□ 0.36
DFFA-203ENST00000476658 C6orf222P0C671 652 aaPredicted RBP17.32■□□□□ 0.36
DFFA-203ENST00000476658 NAPAP54920 295 aa17.32■□□□□ 0.36
DFFA-203ENST00000476658 STK3Q13188 491 aa17.32■□□□□ 0.36
DFFA-203ENST00000476658 STXBP2Q15833 593 aa17.32■□□□□ 0.36
DFFA-203ENST00000476658 WWC2Q6AWC2 1192 aa17.32■□□□□ 0.36
DFFA-203ENST00000476658 IQSEC1Q6DN90 963 aa17.32■□□□□ 0.36
DFFA-203ENST00000476658 ZNF274Q96GC6 653 aaPredicted RBP17.32■□□□□ 0.36
DFFA-203ENST00000476658 SENP6Q9GZR1 1112 aaPredicted RBP17.32■□□□□ 0.36
DFFA-203ENST00000476658 PSTPIP2Q9H939 334 aa17.32■□□□□ 0.36
DFFA-203ENST00000476658 ADAMTS4O75173 837 aa17.31■□□□□ 0.36
DFFA-203ENST00000476658 NR3C2P08235 984 aa17.31■□□□□ 0.36
DFFA-203ENST00000476658 COL6A1P12109 1028 aa17.31■□□□□ 0.36
DFFA-203ENST00000476658 MYCLP12524 364 aaPredicted RBP17.31■□□□□ 0.36
DFFA-203ENST00000476658 SMPD1P17405 629 aa17.31■□□□□ 0.36
DFFA-203ENST00000476658 AKAP17AQ02040 695 aaKnown RBP17.31■□□□□ 0.36
DFFA-203ENST00000476658 USP17L6PQ6QN14 398 aa17.31■□□□□ 0.36
DFFA-203ENST00000476658 PHKBQ93100 1093 aa17.31■□□□□ 0.36
DFFA-203ENST00000476658 IL17RAQ96F46 866 aa17.31■□□□□ 0.36
DFFA-203ENST00000476658 WDR11Q9BZH6 1224 aa17.31■□□□□ 0.36
DFFA-203ENST00000476658 MYH7BA7E2Y1 1941 aa17.31■□□□□ 0.36
DFFA-203ENST00000476658 CEP290O15078 2479 aa17.3■□□□□ 0.36
DFFA-203ENST00000476658 hCG_1984214I3L0E3 225 aa17.3■□□□□ 0.36
DFFA-203ENST00000476658 CPLX1O14810 134 aa17.3■□□□□ 0.36
DFFA-203ENST00000476658 PPFIA3O75145 1194 aa17.3■□□□□ 0.36
DFFA-203ENST00000476658 NEK4P51957 841 aa17.3■□□□□ 0.36
DFFA-203ENST00000476658 AK2P54819 239 aa17.3■□□□□ 0.36
DFFA-203ENST00000476658 GJA9P57773 515 aa17.3■□□□□ 0.36
DFFA-203ENST00000476658 ANKRD1Q15327 319 aa17.3■□□□□ 0.36
DFFA-203ENST00000476658 TMEM63BQ5T3F8 832 aa17.3■□□□□ 0.36
DFFA-203ENST00000476658 SEPT14Q6ZU15 432 aa17.3■□□□□ 0.36
DFFA-203ENST00000476658 TLK2Q86UE8 772 aa17.3■□□□□ 0.36
DFFA-203ENST00000476658 ZNF713Q8N859 430 aaPredicted RBP17.3■□□□□ 0.36
DFFA-203ENST00000476658 SCFD2Q8WU76 684 aa17.3■□□□□ 0.36
DFFA-203ENST00000476658 FERMT2Q96AC1 680 aa17.3■□□□□ 0.36
DFFA-203ENST00000476658 PDCD2LQ9BRP1 358 aa17.3■□□□□ 0.36
DFFA-203ENST00000476658 SLC26A6Q9BXS9 759 aa17.3■□□□□ 0.36
DFFA-203ENST00000476658 AP5M1Q9H0R1 490 aa17.3■□□□□ 0.36
DFFA-203ENST00000476658 ALDH8A1Q9H2A2 487 aaPredicted RBP17.3■□□□□ 0.36
DFFA-203ENST00000476658 RBM27Q9P2N5 1060 aaKnown RBP17.3■□□□□ 0.36
DFFA-203ENST00000476658 GNEQ9Y223 722 aaKnown RBP17.3■□□□□ 0.36
DFFA-203ENST00000476658 RBM47A0AV96 593 aaKnown RBP17.29■□□□□ 0.36
DFFA-203ENST00000476658 MYADML2A6NDP7 307 aa17.29■□□□□ 0.36
DFFA-203ENST00000476658 STXBP3O00186 592 aa17.29■□□□□ 0.36
DFFA-203ENST00000476658 PIK3CDO00329 1044 aa17.29■□□□□ 0.36
DFFA-203ENST00000476658 MEIS2O14770 477 aa17.29■□□□□ 0.36
DFFA-203ENST00000476658 DYNC1LI2O43237 492 aaPredicted RBP17.29■□□□□ 0.36
DFFA-203ENST00000476658 PRPF3O43395 683 aaKnown RBP17.29■□□□□ 0.36
DFFA-203ENST00000476658 EVI5O60447 810 aa17.29■□□□□ 0.36
DFFA-203ENST00000476658 SCG2P13521 617 aa17.29■□□□□ 0.36
DFFA-203ENST00000476658 IFNAR1P17181 557 aa17.29■□□□□ 0.36
DFFA-203ENST00000476658 PTGS1P23219 599 aa17.29■□□□□ 0.36
DFFA-203ENST00000476658 ATN1P54259 1190 aaPredicted RBP17.29■□□□□ 0.36
DFFA-203ENST00000476658 IRX5P78411 483 aaPredicted RBP17.29■□□□□ 0.36
DFFA-203ENST00000476658 PGM5Q15124 567 aa17.29■□□□□ 0.36
DFFA-203ENST00000476658 NTRK3Q16288 839 aa17.29■□□□□ 0.36
DFFA-203ENST00000476658 UBE2SQ16763 222 aa17.29■□□□□ 0.36
DFFA-203ENST00000476658 PFKFB3Q16875 520 aaPredicted RBP17.29■□□□□ 0.36
DFFA-203ENST00000476658 DUSP28Q4G0W2 176 aa17.29■□□□□ 0.36
DFFA-203ENST00000476658 GNASQ5JWF2 1037 aa17.29■□□□□ 0.36
DFFA-203ENST00000476658 PPP1R18Q6NYC8 613 aa17.29■□□□□ 0.36
DFFA-203ENST00000476658 C22orf23Q9BZE7 217 aa17.29■□□□□ 0.36
DFFA-203ENST00000476658 UPF3AQ9H1J1 476 aaKnown RBP17.29■□□□□ 0.36
DFFA-203ENST00000476658 BARHL2Q9NY43 387 aa17.29■□□□□ 0.36
DFFA-203ENST00000476658 EIF3JO75822 258 aaKnown RBP17.28■□□□□ 0.36
DFFA-203ENST00000476658 TXNP10599 105 aaKnown RBP17.28■□□□□ 0.36
DFFA-203ENST00000476658 CCND2P30279 289 aa17.28■□□□□ 0.36
DFFA-203ENST00000476658 BEX3Q00994 111 aa17.28■□□□□ 0.36
DFFA-203ENST00000476658 TTLL4Q14679 1199 aa17.28■□□□□ 0.36
DFFA-203ENST00000476658 KCNA10Q16322 511 aa17.28■□□□□ 0.36
DFFA-203ENST00000476658 TYW1BQ6NUM6 668 aa17.28■□□□□ 0.36
DFFA-203ENST00000476658 CPLX2Q6PUV4 134 aaKnown RBP17.28■□□□□ 0.36
DFFA-203ENST00000476658 PCSK9Q8NBP7 692 aaKnown RBP17.28■□□□□ 0.36
DFFA-203ENST00000476658 KLHDC9Q8NEP7 349 aa17.28■□□□□ 0.36
DFFA-203ENST00000476658 IL31RAQ8NI17 732 aa17.28■□□□□ 0.36
DFFA-203ENST00000476658 TSEN34Q9BSV6 310 aaKnown RBP17.28■□□□□ 0.36
DFFA-203ENST00000476658 RNF26Q9BY78 433 aaPredicted RBP17.28■□□□□ 0.36
DFFA-203ENST00000476658 SLKQ9H2G2 1235 aaPredicted RBP17.28■□□□□ 0.36
DFFA-203ENST00000476658 UPF2Q9HAU5 1272 aaKnown RBP17.28■□□□□ 0.36
DFFA-203ENST00000476658 TPCN1Q9ULQ1 816 aa17.28■□□□□ 0.36
DFFA-203ENST00000476658 PHF24Q9UPV7 400 aa17.28■□□□□ 0.36
DFFA-203ENST00000476658 SMCO2A6NFE2 343 aa17.27■□□□□ 0.36
DFFA-203ENST00000476658 SPDYE3A6NKU9 549 aa17.27■□□□□ 0.36
DFFA-203ENST00000476658 CST5P28325 142 aaPredicted RBP17.27■□□□□ 0.36
DFFA-203ENST00000476658 ADCY7P51828 1080 aa17.27■□□□□ 0.36
DFFA-203ENST00000476658 ACLYP53396 1101 aa17.27■□□□□ 0.36
DFFA-203ENST00000476658 SSRP1Q08945 709 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms