RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 ANTXR2P58335 489 aa18.82■□□□□ 0.6
COL1A1-205ENST00000476387 NECTIN1Q15223 517 aa18.82■□□□□ 0.6
COL1A1-205ENST00000476387 STAG2Q8N3U4 1231 aa18.82■□□□□ 0.6
COL1A1-205ENST00000476387 SCFD2Q8WU76 684 aa18.82■□□□□ 0.6
COL1A1-205ENST00000476387 FAM161BQ96MY7 647 aa18.82■□□□□ 0.6
COL1A1-205ENST00000476387 MTA3Q9BTC8 594 aa18.82■□□□□ 0.6
COL1A1-205ENST00000476387 SEMA6BQ9H3T3 888 aa18.82■□□□□ 0.6
COL1A1-205ENST00000476387 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.81■□□□□ 0.6
COL1A1-205ENST00000476387 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.81■□□□□ 0.6
COL1A1-205ENST00000476387 GRM4Q14833 912 aa18.81■□□□□ 0.6
COL1A1-205ENST00000476387 PPP2R5BQ15173 497 aa18.81■□□□□ 0.6
COL1A1-205ENST00000476387 QRICH1Q2TAL8 776 aa18.81■□□□□ 0.6
COL1A1-205ENST00000476387 BRDTQ58F21 947 aaPredicted RBP18.81■□□□□ 0.6
COL1A1-205ENST00000476387 MCF2L2Q86YR7 1114 aa18.81■□□□□ 0.6
COL1A1-205ENST00000476387 TMEM87BQ96K49 555 aa18.81■□□□□ 0.6
COL1A1-205ENST00000476387 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.81■□□□□ 0.6
COL1A1-205ENST00000476387 VAT1LQ9HCJ6 419 aa18.81■□□□□ 0.6
COL1A1-205ENST00000476387 MAD2L2Q9UI95 211 aa18.81■□□□□ 0.6
COL1A1-205ENST00000476387 CSF2RAP15509 400 aa18.8■□□□□ 0.6
COL1A1-205ENST00000476387 PURAQ00577 322 aaKnown RBP18.8■□□□□ 0.6
COL1A1-205ENST00000476387 TMEM240Q5SV17 173 aa18.8■□□□□ 0.6
COL1A1-205ENST00000476387 PSRC1Q6PGN9 363 aaPredicted RBP18.8■□□□□ 0.6
COL1A1-205ENST00000476387 NFXL1Q6ZNB6 911 aa18.8■□□□□ 0.6
COL1A1-205ENST00000476387 C16orf59Q7L2K0 433 aa18.8■□□□□ 0.6
COL1A1-205ENST00000476387 FBXO11Q86XK2 927 aa18.8■□□□□ 0.6
COL1A1-205ENST00000476387 OR6J1Q8NGC5 347 aa18.8■□□□□ 0.6
COL1A1-205ENST00000476387 IGDCC4Q8TDY8 1250 aa18.8■□□□□ 0.6
COL1A1-205ENST00000476387 NSUN6Q8TEA1 469 aaKnown RBP18.8■□□□□ 0.6
COL1A1-205ENST00000476387 PPP1R12CQ9BZL4 782 aa18.8■□□□□ 0.6
COL1A1-205ENST00000476387 HIPK3Q9H422 1215 aa18.8■□□□□ 0.6
COL1A1-205ENST00000476387 JMJD4Q9H9V9 463 aa18.8■□□□□ 0.6
COL1A1-205ENST00000476387 LY9Q9HBG7 655 aa18.8■□□□□ 0.6
COL1A1-205ENST00000476387 SENP2Q9HC62 589 aa18.8■□□□□ 0.6
COL1A1-205ENST00000476387 MRPL11Q9Y3B7 192 aaKnown RBP18.8■□□□□ 0.6
COL1A1-205ENST00000476387 CUL9Q8IWT3 2517 aa18.8■□□□□ 0.6
COL1A1-205ENST00000476387 PALM3A6NDB9 673 aaPredicted RBP18.79■□□□□ 0.6
COL1A1-205ENST00000476387 KPNA6O60684 536 aa18.79■□□□□ 0.6
COL1A1-205ENST00000476387 CYP2C18P33260 490 aa18.79■□□□□ 0.6
COL1A1-205ENST00000476387 PSMC6P62333 389 aa18.79■□□□□ 0.6
COL1A1-205ENST00000476387 TTLL4Q14679 1199 aa18.79■□□□□ 0.6
COL1A1-205ENST00000476387 RASIP1Q5U651 963 aa18.79■□□□□ 0.6
COL1A1-205ENST00000476387 ZNF654Q8IZM8 581 aa18.79■□□□□ 0.6
COL1A1-205ENST00000476387 SYTL5Q8TDW5 730 aaPredicted RBP18.79■□□□□ 0.6
COL1A1-205ENST00000476387 IWS1Q96ST2 819 aa18.79■□□□□ 0.6
COL1A1-205ENST00000476387 CDX2Q99626 313 aaPredicted RBP18.79■□□□□ 0.6
COL1A1-205ENST00000476387 MTG1Q9BT17 334 aaPredicted RBP18.79■□□□□ 0.6
COL1A1-205ENST00000476387 ALDH8A1Q9H2A2 487 aaPredicted RBP18.79■□□□□ 0.6
COL1A1-205ENST00000476387 TTYH1Q9H313 450 aaPredicted RBP18.79■□□□□ 0.6
COL1A1-205ENST00000476387 GPHNQ9NQX3 736 aaPredicted RBP18.79■□□□□ 0.6
COL1A1-205ENST00000476387 CCDC69A6NI79 296 aa18.78■□□□□ 0.6
COL1A1-205ENST00000476387 A6NJR5 290 aa18.78■□□□□ 0.6
COL1A1-205ENST00000476387 B4GALT4O60513 344 aa18.78■□□□□ 0.6
COL1A1-205ENST00000476387 DDAH1O94760 285 aa18.78■□□□□ 0.6
COL1A1-205ENST00000476387 SUPT20HL2P0C7V6 817 aa18.78■□□□□ 0.6
COL1A1-205ENST00000476387 TROAPQ12815 778 aa18.78■□□□□ 0.6
COL1A1-205ENST00000476387 HOMER1Q86YM7 354 aa18.78■□□□□ 0.6
COL1A1-205ENST00000476387 TMTC2Q8N394 836 aa18.78■□□□□ 0.6
COL1A1-205ENST00000476387 CTCFLQ8NI51 663 aaPredicted RBP18.78■□□□□ 0.6
COL1A1-205ENST00000476387 NOC4LQ9BVI4 516 aaKnown RBP18.78■□□□□ 0.6
COL1A1-205ENST00000476387 AMNQ9BXJ7 453 aa18.78■□□□□ 0.6
COL1A1-205ENST00000476387 TRPV6Q9H1D0 765 aa18.78■□□□□ 0.6
COL1A1-205ENST00000476387 IL23AQ9NPF7 189 aa18.78■□□□□ 0.6
COL1A1-205ENST00000476387 SH2B2O14492 632 aaPredicted RBP18.77■□□□□ 0.6
COL1A1-205ENST00000476387 ZBTB5O15062 677 aa18.77■□□□□ 0.6
COL1A1-205ENST00000476387 MYL3P08590 195 aa18.77■□□□□ 0.6
COL1A1-205ENST00000476387 TXNP10599 105 aaKnown RBP18.77■□□□□ 0.6
COL1A1-205ENST00000476387 KIF5BP33176 963 aa18.77■□□□□ 0.6
COL1A1-205ENST00000476387 GHRHRQ02643 423 aa18.77■□□□□ 0.6
COL1A1-205ENST00000476387 TRAF1Q13077 416 aa18.77■□□□□ 0.6
COL1A1-205ENST00000476387 KRT32Q14532 448 aa18.77■□□□□ 0.6
COL1A1-205ENST00000476387 ZNF365Q70YC5 407 aa18.77■□□□□ 0.6
COL1A1-205ENST00000476387 TBC1D5Q92609 795 aa18.77■□□□□ 0.6
COL1A1-205ENST00000476387 MTMR8Q96EF0 704 aa18.77■□□□□ 0.6
COL1A1-205ENST00000476387 TAAR1Q96RJ0 339 aa18.77■□□□□ 0.6
COL1A1-205ENST00000476387 RMDN3Q96TC7 470 aa18.77■□□□□ 0.6
COL1A1-205ENST00000476387 SCN10AQ9Y5Y9 1956 aa18.77■□□□□ 0.59
COL1A1-205ENST00000476387 REC8O95072 547 aa18.76■□□□□ 0.59
COL1A1-205ENST00000476387 DNAJB2P25686 324 aa18.76■□□□□ 0.59
COL1A1-205ENST00000476387 NFRKBQ6P4R8 1299 aa18.76■□□□□ 0.59
COL1A1-205ENST00000476387 CCDC62Q6P9F0 684 aa18.76■□□□□ 0.59
COL1A1-205ENST00000476387 SAMD3Q8N6K7 520 aa18.76■□□□□ 0.59
COL1A1-205ENST00000476387 HERVK_113Q902F9 699 aa18.76■□□□□ 0.59
COL1A1-205ENST00000476387 NEK1Q96PY6 1258 aa18.76■□□□□ 0.59
COL1A1-205ENST00000476387 MAP3K14Q99558 947 aa18.76■□□□□ 0.59
COL1A1-205ENST00000476387 MYL10Q9BUA6 226 aa18.76■□□□□ 0.59
COL1A1-205ENST00000476387 MTIF3Q9H2K0 278 aaKnown RBP18.76■□□□□ 0.59
COL1A1-205ENST00000476387 MAP3K20Q9NYL2 800 aaKnown RBP18.76■□□□□ 0.59
COL1A1-205ENST00000476387 COL20A1Q9P218 1284 aa18.76■□□□□ 0.59
COL1A1-205ENST00000476387 KIAA1217Q5T5P2 1943 aa18.76■□□□□ 0.59
COL1A1-205ENST00000476387 ARIH2O95376 493 aa18.75■□□□□ 0.59
COL1A1-205ENST00000476387 CALM1P0DP23 149 aa18.75■□□□□ 0.59
COL1A1-205ENST00000476387 CALM2P0DP24 149 aa18.75■□□□□ 0.59
COL1A1-205ENST00000476387 CALM3P0DP25 149 aa18.75■□□□□ 0.59
COL1A1-205ENST00000476387 ACRP10323 421 aa18.75■□□□□ 0.59
COL1A1-205ENST00000476387 LIFRP42702 1097 aa18.75■□□□□ 0.59
COL1A1-205ENST00000476387 HSD17B4P51659 736 aa18.75■□□□□ 0.59
COL1A1-205ENST00000476387 STXBP2Q15833 593 aa18.75■□□□□ 0.59
COL1A1-205ENST00000476387 COPS5Q92905 334 aa18.75■□□□□ 0.59
COL1A1-205ENST00000476387 LRRC2Q9BYS8 371 aa18.75■□□□□ 0.59
COL1A1-205ENST00000476387 RIOX1Q9H6W3 641 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms