RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 SLC35F1Q5T1Q4 408 aa9.83□□□□□ -0.84
SMC5-203ENST00000475540 TMC6Q7Z403 805 aa9.83□□□□□ -0.84
SMC5-203ENST00000475540 ANKLE2Q86XL3 938 aa9.83□□□□□ -0.84
SMC5-203ENST00000475540 MKL1Q969V6 931 aa9.83□□□□□ -0.84
SMC5-203ENST00000475540 DNAJC2Q99543 621 aaKnown RBP9.83□□□□□ -0.84
SMC5-203ENST00000475540 SGPP1Q9BX95 441 aa9.83□□□□□ -0.84
SMC5-203ENST00000475540 ARHGEF4Q9NR80 690 aa9.83□□□□□ -0.84
SMC5-203ENST00000475540 MARCH2Q9P0N8 246 aa9.83□□□□□ -0.84
SMC5-203ENST00000475540 PFDN2Q9UHV9 154 aa9.83□□□□□ -0.84
SMC5-203ENST00000475540 ARNTLO00327 626 aa9.82□□□□□ -0.84
SMC5-203ENST00000475540 DLX3O60479 287 aa9.82□□□□□ -0.84
SMC5-203ENST00000475540 GLI4P10075 376 aa9.82□□□□□ -0.84
SMC5-203ENST00000475540 FGFR1P11362 822 aa9.82□□□□□ -0.84
SMC5-203ENST00000475540 TESK1Q15569 626 aa9.82□□□□□ -0.84
SMC5-203ENST00000475540 NSMFQ6X4W1 530 aa9.82□□□□□ -0.84
SMC5-203ENST00000475540 CCDC103Q8IW40 242 aa9.82□□□□□ -0.84
SMC5-203ENST00000475540 DPF3Q92784 378 aa9.82□□□□□ -0.84
SMC5-203ENST00000475540 DEPDC7Q96QD5 511 aa9.82□□□□□ -0.84
SMC5-203ENST00000475540 SRPK1Q96SB4 655 aaKnown RBP9.82□□□□□ -0.84
SMC5-203ENST00000475540 MBD1Q9UIS9 605 aaPredicted RBP9.82□□□□□ -0.84
SMC5-203ENST00000475540 ZC3H12DA2A288 527 aaKnown RBP9.81□□□□□ -0.84
SMC5-203ENST00000475540 KRT1P04264 644 aa9.81□□□□□ -0.84
SMC5-203ENST00000475540 PABPC1P11940 636 aaKnown RBP9.81□□□□□ -0.84
SMC5-203ENST00000475540 DENND5AQ6IQ26 1287 aa9.81□□□□□ -0.84
SMC5-203ENST00000475540 NETO2Q8NC67 525 aa9.81□□□□□ -0.84
SMC5-203ENST00000475540 RCBTB1Q8NDN9 531 aa9.81□□□□□ -0.84
SMC5-203ENST00000475540 C1orf159Q96HA4 380 aa9.81□□□□□ -0.84
SMC5-203ENST00000475540 NUDT5Q9UKK9 219 aa9.81□□□□□ -0.84
SMC5-203ENST00000475540 DBX1A6NMT0 343 aa9.8□□□□□ -0.84
SMC5-203ENST00000475540 RASA3Q14644 834 aa9.8□□□□□ -0.84
SMC5-203ENST00000475540 PLEKHN1Q494U1 663 aaPredicted RBP9.8□□□□□ -0.84
SMC5-203ENST00000475540 CEP68Q76N32 757 aa9.8□□□□□ -0.84
SMC5-203ENST00000475540 PLEKHO2Q8TD55 490 aa9.8□□□□□ -0.84
SMC5-203ENST00000475540 PEX11GQ96HA9 241 aa9.8□□□□□ -0.84
SMC5-203ENST00000475540 CHAMP1Q96JM3 812 aa9.8□□□□□ -0.84
SMC5-203ENST00000475540 IPO9Q96P70 1041 aaKnown RBP9.8□□□□□ -0.84
SMC5-203ENST00000475540 CNTD2Q9H8S5 307 aa9.8□□□□□ -0.84
SMC5-203ENST00000475540 GCM1Q9NP62 436 aa9.8□□□□□ -0.84
SMC5-203ENST00000475540 FBLN5Q9UBX5 448 aa9.8□□□□□ -0.84
SMC5-203ENST00000475540 SMG5Q9UPR3 1016 aaKnown RBP9.8□□□□□ -0.84
SMC5-203ENST00000475540 C22orf46C9J442 243 aa9.79□□□□□ -0.84
SMC5-203ENST00000475540 NTRK1P04629 796 aa9.79□□□□□ -0.84
SMC5-203ENST00000475540 BCL6P41182 706 aa9.79□□□□□ -0.84
SMC5-203ENST00000475540 WWC2Q6AWC2 1192 aa9.79□□□□□ -0.84
SMC5-203ENST00000475540 USP53Q70EK8 1073 aa9.79□□□□□ -0.84
SMC5-203ENST00000475540 TEX2Q8IWB9 1127 aa9.79□□□□□ -0.84
SMC5-203ENST00000475540 TRMT2BQ96GJ1 504 aaKnown RBP9.79□□□□□ -0.84
SMC5-203ENST00000475540 CDC6Q99741 560 aa9.79□□□□□ -0.84
SMC5-203ENST00000475540 SNTG2Q9NY99 539 aa9.79□□□□□ -0.84
SMC5-203ENST00000475540 PCDHA2Q9Y5H9 948 aa9.79□□□□□ -0.84
SMC5-203ENST00000475540 KDM2BQ8NHM5 1336 aa9.79□□□□□ -0.84
SMC5-203ENST00000475540 FAM221BA6H8Z2 402 aa9.78□□□□□ -0.84
SMC5-203ENST00000475540 PRR5P85299 388 aa9.78□□□□□ -0.84
SMC5-203ENST00000475540 LSAMPQ13449 338 aa9.78□□□□□ -0.84
SMC5-203ENST00000475540 LDHDQ86WU2 507 aa9.78□□□□□ -0.84
SMC5-203ENST00000475540 SCUBE1Q8IWY4 988 aa9.78□□□□□ -0.84
SMC5-203ENST00000475540 ZBTB38Q8NAP3 1195 aaPredicted RBP9.78□□□□□ -0.84
SMC5-203ENST00000475540 UBXN4Q92575 508 aa9.78□□□□□ -0.84
SMC5-203ENST00000475540 OSBP2Q969R2 916 aa9.78□□□□□ -0.84
SMC5-203ENST00000475540 TMEM169Q96HH4 297 aa9.78□□□□□ -0.84
SMC5-203ENST00000475540 RXFP1Q9HBX9 757 aa9.78□□□□□ -0.84
SMC5-203ENST00000475540 NPFFR2Q9Y5X5 522 aa9.78□□□□□ -0.84
SMC5-203ENST00000475540 N4BP3O15049 544 aa9.77□□□□□ -0.85
SMC5-203ENST00000475540 LCP1P13796 627 aa9.77□□□□□ -0.85
SMC5-203ENST00000475540 KCNA10Q16322 511 aa9.77□□□□□ -0.85
SMC5-203ENST00000475540 YOD1Q5VVQ6 348 aaPredicted RBP9.77□□□□□ -0.85
SMC5-203ENST00000475540 MZB1Q8WU39 189 aa9.77□□□□□ -0.85
SMC5-203ENST00000475540 DCAF4Q8WV16 495 aa9.77□□□□□ -0.85
SMC5-203ENST00000475540 TOX2Q96NM4 488 aa9.77□□□□□ -0.85
SMC5-203ENST00000475540 OSBPL2Q9H1P3 480 aa9.77□□□□□ -0.85
SMC5-203ENST00000475540 CD320Q9NPF0 282 aa9.77□□□□□ -0.85
SMC5-203ENST00000475540 GPR27Q9NS67 375 aa9.77□□□□□ -0.85
SMC5-203ENST00000475540 HCFC2Q9Y5Z7 792 aa9.77□□□□□ -0.85
SMC5-203ENST00000475540 NPIPB6E9PJ23 425 aa9.76□□□□□ -0.85
SMC5-203ENST00000475540 DIAPH1O60610 1272 aaKnown RBP9.76□□□□□ -0.85
SMC5-203ENST00000475540 ZBTB7AO95365 584 aa9.76□□□□□ -0.85
SMC5-203ENST00000475540 CDR1P51861 262 aa9.76□□□□□ -0.85
SMC5-203ENST00000475540 SLC9A5Q14940 896 aa9.76□□□□□ -0.85
SMC5-203ENST00000475540 MROH9Q5TGP6 573 aa9.76□□□□□ -0.85
SMC5-203ENST00000475540 RSPO2Q6UXX9 243 aaPredicted RBP9.76□□□□□ -0.85
SMC5-203ENST00000475540 DPH6Q7L8W6 267 aa9.76□□□□□ -0.85
SMC5-203ENST00000475540 DNAJC7Q99615 494 aa9.76□□□□□ -0.85
SMC5-203ENST00000475540 CNOT6Q9ULM6 557 aaKnown RBP9.76□□□□□ -0.85
SMC5-203ENST00000475540 H7BY64 318 aa9.75□□□□□ -0.85
SMC5-203ENST00000475540 ADCY3O60266 1144 aa9.75□□□□□ -0.85
SMC5-203ENST00000475540 FPR2P25090 351 aa9.75□□□□□ -0.85
SMC5-203ENST00000475540 EPHB3P54753 998 aa9.75□□□□□ -0.85
SMC5-203ENST00000475540 ZNF200P98182 395 aaPredicted RBP9.75□□□□□ -0.85
SMC5-203ENST00000475540 LONRF2Q1L5Z9 754 aa9.75□□□□□ -0.85
SMC5-203ENST00000475540 SIGLEC10Q96LC7 697 aa9.75□□□□□ -0.85
SMC5-203ENST00000475540 COA3Q9Y2R0 106 aaPredicted RBP9.75□□□□□ -0.85
SMC5-203ENST00000475540 IRAK3Q9Y616 596 aa9.75□□□□□ -0.85
SMC5-203ENST00000475540 X6R8D5 127 aa9.75□□□□□ -0.85
SMC5-203ENST00000475540 FAM153BP0C7A2 387 aa9.74□□□□□ -0.85
SMC5-203ENST00000475540 PFKLP17858 780 aa9.74□□□□□ -0.85
SMC5-203ENST00000475540 TARBP2Q15633 366 aaKnown RBP9.74□□□□□ -0.85
SMC5-203ENST00000475540 NFE2L2Q16236 605 aa9.74□□□□□ -0.85
SMC5-203ENST00000475540 DCP2Q8IU60 420 aaKnown RBP9.74□□□□□ -0.85
SMC5-203ENST00000475540 RIOX2Q8IUF8 465 aa9.74□□□□□ -0.85
SMC5-203ENST00000475540 TSPAN17Q96FV3 270 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms