RNA–Protein interactions for RNA: ENST00000475035.5

SNRPE-205, Transcript of small nuclear ribonucleoprotein polypeptide E, humanhuman

TSL 1 (best)

Gene SNRPE, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPE-205ENST00000475035 NKRFO15226 690 aaKnown RBP eCLIP10.06□□□□□ -0.8
SNRPE-205ENST00000475035 CTAGE5O15320 804 aa10.06□□□□□ -0.8
SNRPE-205ENST00000475035 TLR3O15455 904 aaKnown RBP10.06□□□□□ -0.8
SNRPE-205ENST00000475035 EDNRBP24530 442 aa10.06□□□□□ -0.8
SNRPE-205ENST00000475035 CPT1AP50416 773 aa10.06□□□□□ -0.8
SNRPE-205ENST00000475035 NKX3-2P78367 333 aa10.06□□□□□ -0.8
SNRPE-205ENST00000475035 IRX5P78411 483 aaPredicted RBP10.06□□□□□ -0.8
SNRPE-205ENST00000475035 TRAF1Q13077 416 aa10.06□□□□□ -0.8
SNRPE-205ENST00000475035 GRM4Q14833 912 aa10.06□□□□□ -0.8
SNRPE-205ENST00000475035 BMP2KLQ5H9B9 411 aa10.06□□□□□ -0.8
SNRPE-205ENST00000475035 TMEM67Q5HYA8 995 aa10.06□□□□□ -0.8
SNRPE-205ENST00000475035 CXCL17Q6UXB2 119 aa10.06□□□□□ -0.8
SNRPE-205ENST00000475035 STAG2Q8N3U4 1231 aa10.06□□□□□ -0.8
SNRPE-205ENST00000475035 NSUN6Q8TEA1 469 aaKnown RBP10.06□□□□□ -0.8
SNRPE-205ENST00000475035 SCFD2Q8WU76 684 aa10.06□□□□□ -0.8
SNRPE-205ENST00000475035 ESYT1Q9BSJ8 1104 aa10.06□□□□□ -0.8
SNRPE-205ENST00000475035 AMNQ9BXJ7 453 aa10.06□□□□□ -0.8
SNRPE-205ENST00000475035 SEZ6LQ9BYH1 1024 aa10.06□□□□□ -0.8
SNRPE-205ENST00000475035 ANO2Q9NQ90 1003 aa10.06□□□□□ -0.8
SNRPE-205ENST00000475035 MAD2L2Q9UI95 211 aa10.06□□□□□ -0.8
SNRPE-205ENST00000475035 PYGBP11216 843 aa10.05□□□□□ -0.8
SNRPE-205ENST00000475035 FPGSQ05932 587 aa10.05□□□□□ -0.8
SNRPE-205ENST00000475035 FAAP100Q0VG06 881 aa10.05□□□□□ -0.8
SNRPE-205ENST00000475035 TTLL4Q14679 1199 aa10.05□□□□□ -0.8
SNRPE-205ENST00000475035 STOX1Q6ZVD7 989 aa10.05□□□□□ -0.8
SNRPE-205ENST00000475035 CHST3Q7LGC8 479 aa10.05□□□□□ -0.8
SNRPE-205ENST00000475035 HOMER1Q86YM7 354 aa10.05□□□□□ -0.8
SNRPE-205ENST00000475035 MB21D2Q8IYB1 491 aaPredicted RBP10.05□□□□□ -0.8
SNRPE-205ENST00000475035 OR6J1Q8NGC5 347 aa10.05□□□□□ -0.8
SNRPE-205ENST00000475035 SYTL5Q8TDW5 730 aaPredicted RBP10.05□□□□□ -0.8
SNRPE-205ENST00000475035 RMDN3Q96TC7 470 aa10.05□□□□□ -0.8
SNRPE-205ENST00000475035 LSG1Q9H089 658 aaKnown RBP10.05□□□□□ -0.8
SNRPE-205ENST00000475035 POLR3EQ9NVU0 708 aa10.05□□□□□ -0.8
SNRPE-205ENST00000475035 PCDHA1Q9Y5I3 950 aa10.05□□□□□ -0.8
SNRPE-205ENST00000475035 TAF6LQ9Y6J9 622 aa10.05□□□□□ -0.8
SNRPE-205ENST00000475035 SCN10AQ9Y5Y9 1956 aa10.05□□□□□ -0.8
SNRPE-205ENST00000475035 RBM47A0AV96 593 aaKnown RBP10.04□□□□□ -0.8
SNRPE-205ENST00000475035 PALM3A6NDB9 673 aaPredicted RBP10.04□□□□□ -0.8
SNRPE-205ENST00000475035 MAP3K13O43283 966 aa10.04□□□□□ -0.8
SNRPE-205ENST00000475035 PRC1O43663 620 aa10.04□□□□□ -0.8
SNRPE-205ENST00000475035 DDAH1O94760 285 aa10.04□□□□□ -0.8
SNRPE-205ENST00000475035 CFBP00751 764 aa10.04□□□□□ -0.8
SNRPE-205ENST00000475035 TIMP1P01033 207 aa10.04□□□□□ -0.8
SNRPE-205ENST00000475035 TXNP10599 105 aaKnown RBP10.04□□□□□ -0.8
SNRPE-205ENST00000475035 PTGS1P23219 599 aa10.04□□□□□ -0.8
SNRPE-205ENST00000475035 KIF5BP33176 963 aa10.04□□□□□ -0.8
SNRPE-205ENST00000475035 MCM5P33992 734 aa10.04□□□□□ -0.8
SNRPE-205ENST00000475035 CDK7P50613 346 aa10.04□□□□□ -0.8
SNRPE-205ENST00000475035 ITGA7Q13683 1181 aa10.04□□□□□ -0.8
SNRPE-205ENST00000475035 RNF20Q5VTR2 975 aa10.04□□□□□ -0.8
SNRPE-205ENST00000475035 ARHGEF16Q5VV41 709 aa10.04□□□□□ -0.8
SNRPE-205ENST00000475035 NFXL1Q6ZNB6 911 aa10.04□□□□□ -0.8
SNRPE-205ENST00000475035 DEFB123Q8N688 67 aa10.04□□□□□ -0.8
SNRPE-205ENST00000475035 CTCFLQ8NI51 663 aaPredicted RBP10.04□□□□□ -0.8
SNRPE-205ENST00000475035 MTMR8Q96EF0 704 aa10.04□□□□□ -0.8
SNRPE-205ENST00000475035 MS4A3Q96HJ5 214 aa10.04□□□□□ -0.8
SNRPE-205ENST00000475035 IWS1Q96ST2 819 aa10.04□□□□□ -0.8
SNRPE-205ENST00000475035 SENP2Q9HC62 589 aa10.04□□□□□ -0.8
SNRPE-205ENST00000475035 GPHNQ9NQX3 736 aaPredicted RBP10.04□□□□□ -0.8
SNRPE-205ENST00000475035 TBX21Q9UL17 535 aa10.04□□□□□ -0.8
SNRPE-205ENST00000475035 PCDHB13Q9Y5F0 798 aa10.04□□□□□ -0.8
SNRPE-205ENST00000475035 CCDC69A6NI79 296 aa10.03□□□□□ -0.8
SNRPE-205ENST00000475035 SLC27A2O14975 620 aa10.03□□□□□ -0.8
SNRPE-205ENST00000475035 CDC45O75419 566 aa10.03□□□□□ -0.8
SNRPE-205ENST00000475035 MYL3P08590 195 aa10.03□□□□□ -0.8
SNRPE-205ENST00000475035 EIF2AK2P19525 551 aaKnown RBP10.03□□□□□ -0.8
SNRPE-205ENST00000475035 ITGB8P26012 769 aa10.03□□□□□ -0.8
SNRPE-205ENST00000475035 HSD17B4P51659 736 aa10.03□□□□□ -0.8
SNRPE-205ENST00000475035 ANTXR2P58335 489 aa10.03□□□□□ -0.8
SNRPE-205ENST00000475035 TROAPQ12815 778 aa10.03□□□□□ -0.8
SNRPE-205ENST00000475035 PPIGQ13427 754 aaKnown RBP eCLIP10.03□□□□□ -0.8
SNRPE-205ENST00000475035 MYO9BQ13459 2157 aa10.03□□□□□ -0.8
SNRPE-205ENST00000475035 SHHQ15465 462 aa10.03□□□□□ -0.8
SNRPE-205ENST00000475035 STXBP2Q15833 593 aa10.03□□□□□ -0.8
SNRPE-205ENST00000475035 C9orf50Q5SZB4 431 aa10.03□□□□□ -0.8
SNRPE-205ENST00000475035 CREB3L3Q68CJ9 461 aa10.03□□□□□ -0.8
SNRPE-205ENST00000475035 FAM126BQ8IXS8 530 aa10.03□□□□□ -0.8
SNRPE-205ENST00000475035 ZNF654Q8IZM8 581 aa10.03□□□□□ -0.8
SNRPE-205ENST00000475035 TMEM199Q8N511 208 aa10.03□□□□□ -0.8
SNRPE-205ENST00000475035 SAMD3Q8N6K7 520 aa10.03□□□□□ -0.8
SNRPE-205ENST00000475035 IGDCC4Q8TDY8 1250 aa10.03□□□□□ -0.8
SNRPE-205ENST00000475035 TBC1D5Q92609 795 aa10.03□□□□□ -0.8
SNRPE-205ENST00000475035 CCDC136Q96JN2 1154 aa10.03□□□□□ -0.8
SNRPE-205ENST00000475035 RNPC3Q96LT9 517 aaKnown RBP10.03□□□□□ -0.8
SNRPE-205ENST00000475035 TAAR1Q96RJ0 339 aa10.03□□□□□ -0.8
SNRPE-205ENST00000475035 PIGSQ96S52 555 aa10.03□□□□□ -0.8
SNRPE-205ENST00000475035 MTA3Q9BTC8 594 aa10.03□□□□□ -0.8
SNRPE-205ENST00000475035 RIOX1Q9H6W3 641 aa10.03□□□□□ -0.8
SNRPE-205ENST00000475035 LY9Q9HBG7 655 aa10.03□□□□□ -0.8
SNRPE-205ENST00000475035 PXMP2Q9NR77 195 aa10.03□□□□□ -0.8
SNRPE-205ENST00000475035 MAP3K20Q9NYL2 800 aaKnown RBP10.03□□□□□ -0.8
SNRPE-205ENST00000475035 COL20A1Q9P218 1284 aa10.03□□□□□ -0.8
SNRPE-205ENST00000475035 MYH7BA7E2Y1 1941 aa10.03□□□□□ -0.8
SNRPE-205ENST00000475035 PNMA6FA0A0J9YX94 578 aa10.02□□□□□ -0.81
SNRPE-205ENST00000475035 GCOM1H8Y6P7 765 aaPredicted RBP10.02□□□□□ -0.81
SNRPE-205ENST00000475035 SH2B2O14492 632 aaPredicted RBP10.02□□□□□ -0.81
SNRPE-205ENST00000475035 GALR2O43603 387 aaPredicted RBP10.02□□□□□ -0.81
SNRPE-205ENST00000475035 KPNA6O60684 536 aa10.02□□□□□ -0.81
SNRPE-205ENST00000475035 PPP1R11O60927 126 aaPredicted RBP10.02□□□□□ -0.81
SNRPE-205ENST00000475035 NEFLP07196 543 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms