RNA–Protein interactions for RNA: ENST00000474996.6

COL2A1-205, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 3

Gene COL2A1, Length 760 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-205ENST00000474996 MYH6P13533 1939 aa16.83■□□□□ 0.28
COL2A1-205ENST00000474996 NBPF20Q3BBV1 942 aa16.83■□□□□ 0.28
COL2A1-205ENST00000474996 TJAP1Q5JTD0 557 aa16.83■□□□□ 0.28
COL2A1-205ENST00000474996 CWC27Q6UX04 472 aaKnown RBP16.83■□□□□ 0.28
COL2A1-205ENST00000474996 PLEKHM2Q8IWE5 1019 aa16.83■□□□□ 0.28
COL2A1-205ENST00000474996 PNMA1Q8ND90 353 aa16.83■□□□□ 0.28
COL2A1-205ENST00000474996 A6NJR5 290 aa16.82■□□□□ 0.28
COL2A1-205ENST00000474996 B4DLN1 442 aa16.82■□□□□ 0.28
COL2A1-205ENST00000474996 KDM4AO75164 1064 aa16.82■□□□□ 0.28
COL2A1-205ENST00000474996 ARIH2O95376 493 aa16.82■□□□□ 0.28
COL2A1-205ENST00000474996 MYOGP15173 224 aa16.82■□□□□ 0.28
COL2A1-205ENST00000474996 IGFBP4P22692 258 aa16.82■□□□□ 0.28
COL2A1-205ENST00000474996 MRPL12P52815 198 aaKnown RBP16.82■□□□□ 0.28
COL2A1-205ENST00000474996 TTLL4Q14679 1199 aa16.82■□□□□ 0.28
COL2A1-205ENST00000474996 CCDC85BQ15834 202 aaPredicted RBP16.82■□□□□ 0.28
COL2A1-205ENST00000474996 CDC37Q16543 378 aaPredicted RBP16.82■□□□□ 0.28
COL2A1-205ENST00000474996 DEFB128Q7Z7B8 93 aa16.82■□□□□ 0.28
COL2A1-205ENST00000474996 CHD1LQ86WJ1 897 aa16.82■□□□□ 0.28
COL2A1-205ENST00000474996 IQCA1Q86XH1 822 aa16.82■□□□□ 0.28
COL2A1-205ENST00000474996 TBC1D5Q92609 795 aa16.82■□□□□ 0.28
COL2A1-205ENST00000474996 RWDD1Q9H446 243 aaPredicted RBP16.82■□□□□ 0.28
COL2A1-205ENST00000474996 B4E1Z4 1266 aa16.81■□□□□ 0.28
COL2A1-205ENST00000474996 KPNA6O60684 536 aa16.81■□□□□ 0.28
COL2A1-205ENST00000474996 IGHDP01880 384 aa16.81■□□□□ 0.28
COL2A1-205ENST00000474996 PFKMP08237 780 aa16.81■□□□□ 0.28
COL2A1-205ENST00000474996 ATP2A2P16615 1042 aaKnown RBP16.81■□□□□ 0.28
COL2A1-205ENST00000474996 CCDC178Q5BJE1 867 aa16.81■□□□□ 0.28
COL2A1-205ENST00000474996 PPP2R2DQ66LE6 453 aa16.81■□□□□ 0.28
COL2A1-205ENST00000474996 NFRKBQ6P4R8 1299 aa16.81■□□□□ 0.28
COL2A1-205ENST00000474996 ADGRF4Q8IZF3 695 aa16.81■□□□□ 0.28
COL2A1-205ENST00000474996 RGS22Q8NE09 1264 aa16.81■□□□□ 0.28
COL2A1-205ENST00000474996 OSBPL3Q9H4L5 887 aa16.81■□□□□ 0.28
COL2A1-205ENST00000474996 KAT14Q9H8E8 782 aa16.81■□□□□ 0.28
COL2A1-205ENST00000474996 DIAPH3Q9NSV4 1193 aa16.81■□□□□ 0.28
COL2A1-205ENST00000474996 PCDHA11Q9Y5I1 949 aa16.81■□□□□ 0.28
COL2A1-205ENST00000474996 TANC1Q9C0D5 1861 aa16.81■□□□□ 0.28
COL2A1-205ENST00000474996 KIAA1217Q5T5P2 1943 aa16.8■□□□□ 0.28
COL2A1-205ENST00000474996 ABCB11O95342 1321 aa16.8■□□□□ 0.28
COL2A1-205ENST00000474996 CHMP4BP1P59074 171 aa16.8■□□□□ 0.28
COL2A1-205ENST00000474996 NUCB1Q02818 461 aa16.8■□□□□ 0.28
COL2A1-205ENST00000474996 AAMPQ13685 434 aa16.8■□□□□ 0.28
COL2A1-205ENST00000474996 SYTL5Q8TDW5 730 aaPredicted RBP16.8■□□□□ 0.28
COL2A1-205ENST00000474996 ANKS1AQ92625 1134 aa16.8■□□□□ 0.28
COL2A1-205ENST00000474996 TAAR1Q96RJ0 339 aa16.8■□□□□ 0.28
COL2A1-205ENST00000474996 ZSCAN10Q96SZ4 725 aaPredicted RBP16.8■□□□□ 0.28
COL2A1-205ENST00000474996 COL20A1Q9P218 1284 aa16.8■□□□□ 0.28
COL2A1-205ENST00000474996 THEGQ9P2T0 379 aa16.8■□□□□ 0.28
COL2A1-205ENST00000474996 TRIP12Q14669 1992 aaPredicted RBP16.8■□□□□ 0.28
COL2A1-205ENST00000474996 NT5C2P49902 561 aa16.79■□□□□ 0.28
COL2A1-205ENST00000474996 QRICH1Q2TAL8 776 aa16.79■□□□□ 0.28
COL2A1-205ENST00000474996 ASPRV1Q53RT3 343 aa16.79■□□□□ 0.28
COL2A1-205ENST00000474996 CCDC62Q6P9F0 684 aa16.79■□□□□ 0.28
COL2A1-205ENST00000474996 SEPT14Q6ZU15 432 aa16.79■□□□□ 0.28
COL2A1-205ENST00000474996 ENAHQ8N8S7 591 aaPredicted RBP16.79■□□□□ 0.28
COL2A1-205ENST00000474996 AFG1LQ8WV93 481 aa16.79■□□□□ 0.28
COL2A1-205ENST00000474996 ATXN2LQ8WWM7 1075 aaKnown RBP16.79■□□□□ 0.28
COL2A1-205ENST00000474996 ZSWIM5Q9P217 1185 aa16.79■□□□□ 0.28
COL2A1-205ENST00000474996 TET1Q8NFU7 2136 aa16.79■□□□□ 0.28
COL2A1-205ENST00000474996 PITPNM1O00562 1244 aa16.78■□□□□ 0.28
COL2A1-205ENST00000474996 DHX16O60231 1041 aaKnown RBP16.78■□□□□ 0.28
COL2A1-205ENST00000474996 IQCF3P0C7M6 154 aa16.78■□□□□ 0.28
COL2A1-205ENST00000474996 ACTN1P12814 892 aa16.78■□□□□ 0.28
COL2A1-205ENST00000474996 RFC2P35250 354 aa16.78■□□□□ 0.28
COL2A1-205ENST00000474996 PTPN11Q06124 597 aaPredicted RBP16.78■□□□□ 0.28
COL2A1-205ENST00000474996 IMMTQ16891 758 aaKnown RBP16.78■□□□□ 0.28
COL2A1-205ENST00000474996 LY6KQ17RY6 165 aa16.78■□□□□ 0.28
COL2A1-205ENST00000474996 RETREG2Q8NC44 543 aa16.78■□□□□ 0.28
COL2A1-205ENST00000474996 NSUN6Q8TEA1 469 aaKnown RBP16.78■□□□□ 0.28
COL2A1-205ENST00000474996 DSCC1Q9BVC3 393 aa16.78■□□□□ 0.28
COL2A1-205ENST00000474996 MAF1Q9H063 256 aa16.78■□□□□ 0.28
COL2A1-205ENST00000474996 VAT1LQ9HCJ6 419 aa16.78■□□□□ 0.28
COL2A1-205ENST00000474996 NOD1Q9Y239 953 aa16.78■□□□□ 0.28
COL2A1-205ENST00000474996 HIP1O00291 1037 aa16.77■□□□□ 0.28
COL2A1-205ENST00000474996 GH1P01241 217 aa16.77■□□□□ 0.28
COL2A1-205ENST00000474996 MMP3P08254 477 aa16.77■□□□□ 0.28
COL2A1-205ENST00000474996 PARP1P09874 1014 aaKnown RBP16.77■□□□□ 0.28
COL2A1-205ENST00000474996 ARHGAP1Q07960 439 aa16.77■□□□□ 0.28
COL2A1-205ENST00000474996 BFSP2Q13515 415 aa16.77■□□□□ 0.28
COL2A1-205ENST00000474996 TMEM67Q5HYA8 995 aa16.77■□□□□ 0.28
COL2A1-205ENST00000474996 CHST3Q7LGC8 479 aa16.77■□□□□ 0.28
COL2A1-205ENST00000474996 FBXO11Q86XK2 927 aa16.77■□□□□ 0.28
COL2A1-205ENST00000474996 MCF2L2Q86YR7 1114 aa16.77■□□□□ 0.28
COL2A1-205ENST00000474996 ASB2Q96Q27 587 aa16.77■□□□□ 0.28
COL2A1-205ENST00000474996 RMDN3Q96TC7 470 aa16.77■□□□□ 0.28
COL2A1-205ENST00000474996 FTOQ9C0B1 505 aaKnown RBP eCLIP16.77■□□□□ 0.28
COL2A1-205ENST00000474996 JMJD4Q9H9V9 463 aa16.77■□□□□ 0.28
COL2A1-205ENST00000474996 MUC3AQ02505 3323 aa16.77■□□□□ 0.27
COL2A1-205ENST00000474996 REV3LO60673 3130 aa16.76■□□□□ 0.27
COL2A1-205ENST00000474996 CA3P07451 260 aa16.76■□□□□ 0.27
COL2A1-205ENST00000474996 STXBP2Q15833 593 aa16.76■□□□□ 0.27
COL2A1-205ENST00000474996 PTGISQ16647 500 aa16.76■□□□□ 0.27
COL2A1-205ENST00000474996 ARHGEF16Q5VV41 709 aa16.76■□□□□ 0.27
COL2A1-205ENST00000474996 MICALL1Q8N3F8 863 aa16.76■□□□□ 0.27
COL2A1-205ENST00000474996 IWS1Q96ST2 819 aa16.76■□□□□ 0.27
COL2A1-205ENST00000474996 UBAC1Q9BSL1 405 aa16.76■□□□□ 0.27
COL2A1-205ENST00000474996 CTNNA3Q9UI47 895 aa16.76■□□□□ 0.27
COL2A1-205ENST00000474996 MRPL11Q9Y3B7 192 aaKnown RBP16.76■□□□□ 0.27
COL2A1-205ENST00000474996 MYH7BA7E2Y1 1941 aa16.76■□□□□ 0.27
COL2A1-205ENST00000474996 TNFRSF10AO00220 468 aa16.75■□□□□ 0.27
COL2A1-205ENST00000474996 EIF2AK2P19525 551 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms