RNA–Protein interactions for RNA: ENST00000474986.2

YIF1A-206, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 1 (best)

Gene YIF1A, Length 860 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-206ENST00000474986 PRAMEF19Q5SWL8 479 aa26.26■■□□□ 1.79
YIF1A-206ENST00000474986 TYW1BQ6NUM6 668 aa26.26■■□□□ 1.79
YIF1A-206ENST00000474986 FAM177A1Q8N128 213 aaPredicted RBP26.26■■□□□ 1.79
YIF1A-206ENST00000474986 U2AF1L4Q8WU68 220 aaKnown RBP26.26■■□□□ 1.79
YIF1A-206ENST00000474986 DEFB118Q96PH6 123 aa26.26■■□□□ 1.79
YIF1A-206ENST00000474986 KATNBL1Q9H079 304 aa26.26■■□□□ 1.79
YIF1A-206ENST00000474986 VTA1Q9NP79 307 aa26.26■■□□□ 1.79
YIF1A-206ENST00000474986 SH2B1Q9NRF2 756 aaPredicted RBP26.26■■□□□ 1.79
YIF1A-206ENST00000474986 DDX20Q9UHI6 824 aaKnown RBP26.26■■□□□ 1.79
YIF1A-206ENST00000474986 LCTP09848 1927 aa26.26■■□□□ 1.79
YIF1A-206ENST00000474986 CNGA1P29973 690 aa26.25■■□□□ 1.79
YIF1A-206ENST00000474986 ARHGEF16Q5VV41 709 aa26.25■■□□□ 1.79
YIF1A-206ENST00000474986 SMARCC2Q8TAQ2 1214 aa26.25■■□□□ 1.79
YIF1A-206ENST00000474986 CRISPLD2Q9H0B8 497 aa26.25■■□□□ 1.79
YIF1A-206ENST00000474986 RIC8AQ9NPQ8 531 aa26.25■■□□□ 1.79
YIF1A-206ENST00000474986 SH3GLB2Q9NR46 395 aa26.25■■□□□ 1.79
YIF1A-206ENST00000474986 PXMP2Q9NR77 195 aa26.25■■□□□ 1.79
YIF1A-206ENST00000474986 POTEFA5A3E0 1075 aa26.24■■□□□ 1.79
YIF1A-206ENST00000474986 AKR1A1P14550 325 aa26.24■■□□□ 1.79
YIF1A-206ENST00000474986 MCM2P49736 904 aa26.24■■□□□ 1.79
YIF1A-206ENST00000474986 PDE4DQ08499 809 aa26.24■■□□□ 1.79
YIF1A-206ENST00000474986 LHX8Q68G74 356 aa26.24■■□□□ 1.79
YIF1A-206ENST00000474986 NECAB1Q8N987 351 aa26.24■■□□□ 1.79
YIF1A-206ENST00000474986 ZHX1Q9UKY1 873 aaPredicted RBP26.24■■□□□ 1.79
YIF1A-206ENST00000474986 FAM184BQ9ULE4 1060 aa26.24■■□□□ 1.79
YIF1A-206ENST00000474986 FRMPD4Q14CM0 1322 aa26.23■■□□□ 1.79
YIF1A-206ENST00000474986 ADCY7P51828 1080 aa26.23■■□□□ 1.79
YIF1A-206ENST00000474986 SOX10P56693 466 aa26.23■■□□□ 1.79
YIF1A-206ENST00000474986 USP17L6PQ6QN14 398 aa26.23■■□□□ 1.79
YIF1A-206ENST00000474986 FCHSD1Q86WN1 690 aa26.23■■□□□ 1.79
YIF1A-206ENST00000474986 CCDC148Q8NFR7 591 aa26.23■■□□□ 1.79
YIF1A-206ENST00000474986 PDCD2LQ9BRP1 358 aa26.23■■□□□ 1.79
YIF1A-206ENST00000474986 SMCO2A6NFE2 343 aa26.22■■□□□ 1.79
YIF1A-206ENST00000474986 PPFIA3O75145 1194 aa26.22■■□□□ 1.79
YIF1A-206ENST00000474986 CTDNEP1O95476 244 aa26.22■■□□□ 1.79
YIF1A-206ENST00000474986 EIF2AK2P19525 551 aaKnown RBP26.22■■□□□ 1.79
YIF1A-206ENST00000474986 ZMYND12Q9H0C1 365 aa26.22■■□□□ 1.79
YIF1A-206ENST00000474986 OGDHLQ9ULD0 1010 aa26.22■■□□□ 1.79
YIF1A-206ENST00000474986 NR3C2P08235 984 aa26.21■■□□□ 1.79
YIF1A-206ENST00000474986 STXBP2Q15833 593 aa26.21■■□□□ 1.79
YIF1A-206ENST00000474986 FOSP01100 380 aaPredicted RBP26.2■■□□□ 1.78
YIF1A-206ENST00000474986 RARBP10826 455 aa26.2■■□□□ 1.78
YIF1A-206ENST00000474986 GNA11P29992 359 aa26.2■■□□□ 1.78
YIF1A-206ENST00000474986 CCDC144BQ3MJ40 725 aa26.2■■□□□ 1.78
YIF1A-206ENST00000474986 MCTP2Q6DN12 878 aa26.2■■□□□ 1.78
YIF1A-206ENST00000474986 TAPT1Q6NXT6 567 aa26.2■■□□□ 1.78
YIF1A-206ENST00000474986 FBXO16Q8IX29 292 aaPredicted RBP26.2■■□□□ 1.78
YIF1A-206ENST00000474986 NSUN7Q8NE18 718 aaKnown RBP26.2■■□□□ 1.78
YIF1A-206ENST00000474986 WASF1Q92558 559 aa26.2■■□□□ 1.78
YIF1A-206ENST00000474986 SHISA4Q96DD7 197 aa26.2■■□□□ 1.78
YIF1A-206ENST00000474986 LLPHQ9BRT6 129 aaKnown RBP26.2■■□□□ 1.78
YIF1A-206ENST00000474986 C6orf50Q9HD87 102 aa26.2■■□□□ 1.78
YIF1A-206ENST00000474986 DDX49Q9Y6V7 483 aaKnown RBP26.2■■□□□ 1.78
YIF1A-206ENST00000474986 RBM47A0AV96 593 aaKnown RBP26.19■■□□□ 1.78
YIF1A-206ENST00000474986 SPDYE3A6NKU9 549 aa26.19■■□□□ 1.78
YIF1A-206ENST00000474986 EIF3JO75822 258 aaKnown RBP26.19■■□□□ 1.78
YIF1A-206ENST00000474986 TFRCP02786 760 aaKnown RBP26.19■■□□□ 1.78
YIF1A-206ENST00000474986 EN2P19622 333 aaPredicted RBP26.19■■□□□ 1.78
YIF1A-206ENST00000474986 ST3GAL1Q11201 340 aa26.19■■□□□ 1.78
YIF1A-206ENST00000474986 AP3B2Q13367 1082 aa26.19■■□□□ 1.78
YIF1A-206ENST00000474986 PGM5Q15124 567 aa26.19■■□□□ 1.78
YIF1A-206ENST00000474986 IQSEC1Q6DN90 963 aa26.19■■□□□ 1.78
YIF1A-206ENST00000474986 XRRA1Q6P2D8 792 aa26.19■■□□□ 1.78
YIF1A-206ENST00000474986 VSIG10LQ86VR7 867 aa26.19■■□□□ 1.78
YIF1A-206ENST00000474986 ANKLE1Q8NAG6 615 aa26.19■■□□□ 1.78
YIF1A-206ENST00000474986 BICD2Q8TD16 824 aa26.19■■□□□ 1.78
YIF1A-206ENST00000474986 VPS54Q9P1Q0 977 aa26.19■■□□□ 1.78
YIF1A-206ENST00000474986 ORC3Q9UBD5 711 aaPredicted RBP26.19■■□□□ 1.78
YIF1A-206ENST00000474986 CCND2P30279 289 aa26.18■■□□□ 1.78
YIF1A-206ENST00000474986 CLK2P49760 499 aaKnown RBP26.18■■□□□ 1.78
YIF1A-206ENST00000474986 UBE2SQ16763 222 aa26.18■■□□□ 1.78
YIF1A-206ENST00000474986 EEPD1Q7L9B9 569 aa26.18■■□□□ 1.78
YIF1A-206ENST00000474986 EHMT1Q9H9B1 1298 aa26.18■■□□□ 1.78
YIF1A-206ENST00000474986 MCM3APO60318 1980 aa26.17■■□□□ 1.78
YIF1A-206ENST00000474986 DUSP11O75319 330 aaKnown RBP26.17■■□□□ 1.78
YIF1A-206ENST00000474986 STAM2O75886 525 aa26.17■■□□□ 1.78
YIF1A-206ENST00000474986 XBP1P17861 261 aa26.17■■□□□ 1.78
YIF1A-206ENST00000474986 CCDC83Q8IWF9 413 aa26.17■■□□□ 1.78
YIF1A-206ENST00000474986 PCDHA6Q9UN73 950 aa26.17■■□□□ 1.78
YIF1A-206ENST00000474986 PCDHA8Q9Y5H6 950 aa26.17■■□□□ 1.78
YIF1A-206ENST00000474986 BRCA2P51587 3418 aa26.17■■□□□ 1.78
YIF1A-206ENST00000474986 TNFAIP2Q03169 654 aa26.16■■□□□ 1.78
YIF1A-206ENST00000474986 GALNT17Q6IS24 598 aa26.16■■□□□ 1.78
YIF1A-206ENST00000474986 SCFD2Q8WU76 684 aa26.16■■□□□ 1.78
YIF1A-206ENST00000474986 LRRC37A2A6NM11 1700 aa26.16■■□□□ 1.78
YIF1A-206ENST00000474986 CD2BP2O95400 341 aaKnown RBP26.15■■□□□ 1.78
YIF1A-206ENST00000474986 FDPSP14324 419 aaKnown RBP26.15■■□□□ 1.78
YIF1A-206ENST00000474986 ADCYAP1R1P41586 468 aa26.15■■□□□ 1.78
YIF1A-206ENST00000474986 RGS19P49795 217 aa26.15■■□□□ 1.78
YIF1A-206ENST00000474986 NLRP5P59047 1200 aa26.15■■□□□ 1.78
YIF1A-206ENST00000474986 PCNX4Q63HM2 1172 aa26.15■■□□□ 1.78
YIF1A-206ENST00000474986 REXO1Q8N1G1 1221 aaKnown RBP26.15■■□□□ 1.78
YIF1A-206ENST00000474986 ARRDC4Q8NCT1 418 aa26.15■■□□□ 1.78
YIF1A-206ENST00000474986 IL31RAQ8NI17 732 aa26.15■■□□□ 1.78
YIF1A-206ENST00000474986 XPNPEP3Q9NQH7 507 aa26.15■■□□□ 1.78
YIF1A-206ENST00000474986 PDGFCQ9NRA1 345 aa26.15■■□□□ 1.78
YIF1A-206ENST00000474986 Q9Y3F1 56 aa26.15■■□□□ 1.78
YIF1A-206ENST00000474986 NKRFO15226 690 aaKnown RBP eCLIP26.14■■□□□ 1.78
YIF1A-206ENST00000474986 MYCLP12524 364 aaPredicted RBP26.14■■□□□ 1.78
YIF1A-206ENST00000474986 HMGN5P82970 282 aaKnown RBP26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms