RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 PLS1Q14651 629 aa10.92□□□□□ -0.66
DDX39B-217ENST00000474961 SAFBQ15424 915 aaKnown RBP eCLIP10.92□□□□□ -0.66
DDX39B-217ENST00000474961 NPY5RQ15761 445 aa10.92□□□□□ -0.66
DDX39B-217ENST00000474961 SNRNP48Q6IEG0 339 aaKnown RBP10.92□□□□□ -0.66
DDX39B-217ENST00000474961 GALNT17Q6IS24 598 aa10.92□□□□□ -0.66
DDX39B-217ENST00000474961 FERMT3Q86UX7 667 aa10.92□□□□□ -0.66
DDX39B-217ENST00000474961 DIS3L2Q8IYB7 885 aaKnown RBP10.92□□□□□ -0.66
DDX39B-217ENST00000474961 GTF3C2Q8WUA4 911 aaPredicted RBP10.92□□□□□ -0.66
DDX39B-217ENST00000474961 TATDN2Q93075 761 aa10.92□□□□□ -0.66
DDX39B-217ENST00000474961 PARK7Q99497 189 aaKnown RBP10.92□□□□□ -0.66
DDX39B-217ENST00000474961 PAGR1Q9BTK6 254 aa10.92□□□□□ -0.66
DDX39B-217ENST00000474961 C6orf50Q9HD87 102 aa10.92□□□□□ -0.66
DDX39B-217ENST00000474961 ZCCHC17Q9NP64 241 aaKnown RBP10.92□□□□□ -0.66
DDX39B-217ENST00000474961 RBPJLQ9UBG7 517 aa10.92□□□□□ -0.66
DDX39B-217ENST00000474961 ZNF214Q9UL59 606 aaPredicted RBP10.92□□□□□ -0.66
DDX39B-217ENST00000474961 MRPL11Q9Y3B7 192 aaKnown RBP10.92□□□□□ -0.66
DDX39B-217ENST00000474961 RABGAP1Q9Y3P9 1069 aa10.92□□□□□ -0.66
DDX39B-217ENST00000474961 BTBD18B2RXH4 712 aa10.91□□□□□ -0.66
DDX39B-217ENST00000474961 KIF28PB7ZC32 967 aa10.91□□□□□ -0.66
DDX39B-217ENST00000474961 F13A1P00488 732 aa10.91□□□□□ -0.66
DDX39B-217ENST00000474961 GNA11P29992 359 aa10.91□□□□□ -0.66
DDX39B-217ENST00000474961 STAT3P40763 770 aa10.91□□□□□ -0.66
DDX39B-217ENST00000474961 ADCY7P51828 1080 aa10.91□□□□□ -0.66
DDX39B-217ENST00000474961 RESTQ13127 1097 aa10.91□□□□□ -0.66
DDX39B-217ENST00000474961 BLIDQ8IZY5 108 aa10.91□□□□□ -0.66
DDX39B-217ENST00000474961 DAGLBQ8NCG7 672 aa10.91□□□□□ -0.66
DDX39B-217ENST00000474961 SMCR8Q8TEV9 937 aaPredicted RBP10.91□□□□□ -0.66
DDX39B-217ENST00000474961 CUL5Q93034 780 aa10.91□□□□□ -0.66
DDX39B-217ENST00000474961 TRERF1Q96PN7 1200 aa10.91□□□□□ -0.66
DDX39B-217ENST00000474961 TEX13BQ9BXU2 312 aa10.91□□□□□ -0.66
DDX39B-217ENST00000474961 FOXP1Q9H334 677 aaPredicted RBP10.91□□□□□ -0.66
DDX39B-217ENST00000474961 PSTPIP2Q9H939 334 aa10.91□□□□□ -0.66
DDX39B-217ENST00000474961 BRMS1Q9HCU9 246 aa10.91□□□□□ -0.66
DDX39B-217ENST00000474961 RIC8AQ9NPQ8 531 aa10.91□□□□□ -0.66
DDX39B-217ENST00000474961 PCDHA4Q9UN74 947 aa10.91□□□□□ -0.66
DDX39B-217ENST00000474961 RIPK3Q9Y572 518 aa10.91□□□□□ -0.66
DDX39B-217ENST00000474961 MYH7BA7E2Y1 1941 aa10.91□□□□□ -0.66
DDX39B-217ENST00000474961 M0R2N6 131 aa10.9□□□□□ -0.66
DDX39B-217ENST00000474961 OPLAHO14841 1288 aa10.9□□□□□ -0.66
DDX39B-217ENST00000474961 U2AF2P26368 475 aaKnown RBP eCLIP10.9□□□□□ -0.666e-25■■■■□ 24.4
DDX39B-217ENST00000474961 GCLCP48506 637 aaPredicted RBP10.9□□□□□ -0.66
DDX39B-217ENST00000474961 VEGFBP49765 207 aa10.9□□□□□ -0.66
DDX39B-217ENST00000474961 MRPL12P52815 198 aaKnown RBP10.9□□□□□ -0.66
DDX39B-217ENST00000474961 NR5A1Q13285 461 aa10.9□□□□□ -0.66
DDX39B-217ENST00000474961 GNL2Q13823 731 aaKnown RBP10.9□□□□□ -0.66
DDX39B-217ENST00000474961 TAF1CQ15572 869 aaPredicted RBP10.9□□□□□ -0.66
DDX39B-217ENST00000474961 Q3C1V9 767 aa10.9□□□□□ -0.66
DDX39B-217ENST00000474961 TKFCQ3LXA3 575 aa10.9□□□□□ -0.66
DDX39B-217ENST00000474961 MUM1L1Q5H9M0 696 aa10.9□□□□□ -0.66
DDX39B-217ENST00000474961 RIOX2Q8IUF8 465 aa10.9□□□□□ -0.66
DDX39B-217ENST00000474961 BICD2Q8TD16 824 aa10.9□□□□□ -0.66
DDX39B-217ENST00000474961 CLEC4DQ8WXI8 215 aa10.9□□□□□ -0.66
DDX39B-217ENST00000474961 TBC1D5Q92609 795 aa10.9□□□□□ -0.66
DDX39B-217ENST00000474961 SPATC1LQ9H0A9 340 aa10.9□□□□□ -0.66
DDX39B-217ENST00000474961 GLT8D2Q9H1C3 349 aa10.9□□□□□ -0.66
DDX39B-217ENST00000474961 ZSCAN16Q9H4T2 348 aaPredicted RBP10.9□□□□□ -0.66
DDX39B-217ENST00000474961 TXNRD2Q9NNW7 524 aa10.9□□□□□ -0.66
DDX39B-217ENST00000474961 HOMER2Q9NSB8 354 aa10.9□□□□□ -0.66
DDX39B-217ENST00000474961 RNF146Q9NTX7 359 aa10.9□□□□□ -0.66
DDX39B-217ENST00000474961 ADGRA2Q96PE1 1338 aa10.89□□□□□ -0.67
DDX39B-217ENST00000474961 NFIBO00712 420 aa10.89□□□□□ -0.67
DDX39B-217ENST00000474961 MEIS2O14770 477 aa10.89□□□□□ -0.67
DDX39B-217ENST00000474961 ERVK-9P63128 1117 aa10.89□□□□□ -0.67
DDX39B-217ENST00000474961 ERVK-24P63145 666 aa10.89□□□□□ -0.67
DDX39B-217ENST00000474961 UBE2SQ16763 222 aa10.89□□□□□ -0.67
DDX39B-217ENST00000474961 JAKMIP3Q5VZ66 844 aa10.89□□□□□ -0.67
DDX39B-217ENST00000474961 USP17L6PQ6QN14 398 aa10.89□□□□□ -0.67
DDX39B-217ENST00000474961 NUDT18Q6ZVK8 323 aa10.89□□□□□ -0.67
DDX39B-217ENST00000474961 ANKRD13CQ8N6S4 541 aa10.89□□□□□ -0.67
DDX39B-217ENST00000474961 TTC13Q8NBP0 860 aa10.89□□□□□ -0.67
DDX39B-217ENST00000474961 RASGRP4Q8TDF6 673 aa10.89□□□□□ -0.67
DDX39B-217ENST00000474961 TNFRSF25Q93038 417 aa10.89□□□□□ -0.67
DDX39B-217ENST00000474961 MOV10L1Q9BXT6 1211 aaKnown RBP10.89□□□□□ -0.67
DDX39B-217ENST00000474961 TMEM260Q9NX78 707 aa10.89□□□□□ -0.67
DDX39B-217ENST00000474961 BIN2Q9UBW5 565 aaPredicted RBP10.89□□□□□ -0.67
DDX39B-217ENST00000474961 SEPT9Q9UHD8 586 aaPredicted RBP10.89□□□□□ -0.67
DDX39B-217ENST00000474961 PCDHA6Q9UN73 950 aa10.89□□□□□ -0.67
DDX39B-217ENST00000474961 PCDHA8Q9Y5H6 950 aa10.89□□□□□ -0.67
DDX39B-217ENST00000474961 PLXNB2O15031 1838 aa10.88□□□□□ -0.67
DDX39B-217ENST00000474961 LCTP09848 1927 aa10.88□□□□□ -0.67
DDX39B-217ENST00000474961 GCOM1H8Y6P7 765 aaPredicted RBP10.88□□□□□ -0.67
DDX39B-217ENST00000474961 MGAMO43451 1857 aa10.88□□□□□ -0.67
DDX39B-217ENST00000474961 SLC25A27O95847 323 aa10.88□□□□□ -0.67
DDX39B-217ENST00000474961 CFBP00751 764 aa10.88□□□□□ -0.67
DDX39B-217ENST00000474961 POLR2MP0CAP2 368 aa10.88□□□□□ -0.67
DDX39B-217ENST00000474961 HOXA13P31271 388 aaPredicted RBP10.88□□□□□ -0.67
DDX39B-217ENST00000474961 MAP2K2P36507 400 aa10.88□□□□□ -0.67
DDX39B-217ENST00000474961 CLK2P49760 499 aaKnown RBP10.88□□□□□ -0.67
DDX39B-217ENST00000474961 FOXD4L6Q3SYB3 417 aaPredicted RBP10.88□□□□□ -0.67
DDX39B-217ENST00000474961 NOM1Q5C9Z4 860 aaKnown RBP10.88□□□□□ -0.67
DDX39B-217ENST00000474961 EARS2Q5JPH6 523 aaKnown RBP10.88□□□□□ -0.67
DDX39B-217ENST00000474961 FAM173BQ6P4H8 233 aa10.88□□□□□ -0.67
DDX39B-217ENST00000474961 FOXD4L3Q6VB84 417 aaPredicted RBP10.88□□□□□ -0.67
DDX39B-217ENST00000474961 BRAPQ7Z569 592 aa10.88□□□□□ -0.67
DDX39B-217ENST00000474961 NCAPG2Q86XI2 1143 aa10.88□□□□□ -0.67
DDX39B-217ENST00000474961 MCF2L2Q86YR7 1114 aa10.88□□□□□ -0.67
DDX39B-217ENST00000474961 NOSTRINQ8IVI9 506 aa10.88□□□□□ -0.67
DDX39B-217ENST00000474961 DOCK3Q8IZD9 2030 aa10.88□□□□□ -0.67
DDX39B-217ENST00000474961 REXO1Q8N1G1 1221 aaKnown RBP10.88□□□□□ -0.67
DDX39B-217ENST00000474961 CHST13Q8NET6 341 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms