RNA–Protein interactions for RNA: ENST00000474945.1

SPCS1-204, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 2

Gene SPCS1, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-204ENST00000474945 TRAF1Q13077 416 aa15.8■□□□□ 0.12
SPCS1-204ENST00000474945 NECTIN1Q15223 517 aa15.8■□□□□ 0.12
SPCS1-204ENST00000474945 ARHGEF16Q5VV41 709 aa15.8■□□□□ 0.12
SPCS1-204ENST00000474945 RAB11FIP4Q86YS3 637 aa15.8■□□□□ 0.12
SPCS1-204ENST00000474945 NSUN6Q8TEA1 469 aaKnown RBP15.8■□□□□ 0.12
SPCS1-204ENST00000474945 SCFD2Q8WU76 684 aa15.8■□□□□ 0.12
SPCS1-204ENST00000474945 BADQ92934 168 aa15.8■□□□□ 0.12
SPCS1-204ENST00000474945 TRIM43Q96BQ3 446 aaPredicted RBP15.8■□□□□ 0.12
SPCS1-204ENST00000474945 TAAR1Q96RJ0 339 aa15.8■□□□□ 0.12
SPCS1-204ENST00000474945 MTA3Q9BTC8 594 aa15.8■□□□□ 0.12
SPCS1-204ENST00000474945 MAF1Q9H063 256 aa15.8■□□□□ 0.12
SPCS1-204ENST00000474945 RIOX1Q9H6W3 641 aa15.8■□□□□ 0.12
SPCS1-204ENST00000474945 TMEM39AQ9NV64 488 aa15.8■□□□□ 0.12
SPCS1-204ENST00000474945 OPLAHO14841 1288 aa15.79■□□□□ 0.12
SPCS1-204ENST00000474945 CYTH3O43739 400 aa15.79■□□□□ 0.12
SPCS1-204ENST00000474945 RAG1P15918 1043 aa15.79■□□□□ 0.12
SPCS1-204ENST00000474945 RXRAP19793 462 aa15.79■□□□□ 0.12
SPCS1-204ENST00000474945 HOXA13P31271 388 aaPredicted RBP15.79■□□□□ 0.12
SPCS1-204ENST00000474945 CPT1AP50416 773 aa15.79■□□□□ 0.12
SPCS1-204ENST00000474945 COL9A3Q14050 684 aaPredicted RBP15.79■□□□□ 0.12
SPCS1-204ENST00000474945 ANKRD33Q7Z3H0 272 aa15.79■□□□□ 0.12
SPCS1-204ENST00000474945 LRCH3Q96II8 777 aa15.79■□□□□ 0.12
SPCS1-204ENST00000474945 SEC63Q9UGP8 760 aaKnown RBP15.79■□□□□ 0.12
SPCS1-204ENST00000474945 Q9Y3F1 56 aa15.79■□□□□ 0.12
SPCS1-204ENST00000474945 SLC12A7Q9Y666 1083 aa15.79■□□□□ 0.12
SPCS1-204ENST00000474945 SZT2Q5T011 3432 aa15.78■□□□□ 0.12
SPCS1-204ENST00000474945 PNMA6FA0A0J9YX94 578 aa15.78■□□□□ 0.12
SPCS1-204ENST00000474945 RBM47A0AV96 593 aaKnown RBP15.78■□□□□ 0.12
SPCS1-204ENST00000474945 ARVCFO00192 962 aa15.78■□□□□ 0.12
SPCS1-204ENST00000474945 KIAA0355O15063 1070 aa15.78■□□□□ 0.12
SPCS1-204ENST00000474945 TLR3O15455 904 aaKnown RBP15.78■□□□□ 0.12
SPCS1-204ENST00000474945 CABYRO75952 493 aa15.78■□□□□ 0.12
SPCS1-204ENST00000474945 PLEKHA8P1O95397 391 aa15.78■□□□□ 0.12
SPCS1-204ENST00000474945 MYL3P08590 195 aa15.78■□□□□ 0.12
SPCS1-204ENST00000474945 TXNP10599 105 aaKnown RBP15.78■□□□□ 0.12
SPCS1-204ENST00000474945 HSD17B4P51659 736 aa15.78■□□□□ 0.12
SPCS1-204ENST00000474945 FAAP100Q0VG06 881 aa15.78■□□□□ 0.12
SPCS1-204ENST00000474945 TTLL4Q14679 1199 aa15.78■□□□□ 0.12
SPCS1-204ENST00000474945 SEPT14Q6ZU15 432 aa15.78■□□□□ 0.12
SPCS1-204ENST00000474945 MICU3Q86XE3 530 aa15.78■□□□□ 0.12
SPCS1-204ENST00000474945 RRP36Q96EU6 259 aaKnown RBP15.78■□□□□ 0.12
SPCS1-204ENST00000474945 TOX2Q96NM4 488 aa15.78■□□□□ 0.12
SPCS1-204ENST00000474945 PXMP2Q9NR77 195 aa15.78■□□□□ 0.12
SPCS1-204ENST00000474945 GCOM1H8Y6P7 765 aaPredicted RBP15.77■□□□□ 0.12
SPCS1-204ENST00000474945 NKRFO15226 690 aaKnown RBP eCLIP15.77■□□□□ 0.12
SPCS1-204ENST00000474945 POLR2MP0CAP2 368 aa15.77■□□□□ 0.12
SPCS1-204ENST00000474945 CALM1P0DP23 149 aa15.77■□□□□ 0.12
SPCS1-204ENST00000474945 CALM2P0DP24 149 aa15.77■□□□□ 0.12
SPCS1-204ENST00000474945 CALM3P0DP25 149 aa15.77■□□□□ 0.12
SPCS1-204ENST00000474945 LIFRP42702 1097 aa15.77■□□□□ 0.12
SPCS1-204ENST00000474945 PSMC6P62333 389 aa15.77■□□□□ 0.12
SPCS1-204ENST00000474945 STXBP2Q15833 593 aa15.77■□□□□ 0.12
SPCS1-204ENST00000474945 BRDTQ58F21 947 aaPredicted RBP15.77■□□□□ 0.12
SPCS1-204ENST00000474945 TMTC2Q8N394 836 aa15.77■□□□□ 0.12
SPCS1-204ENST00000474945 COPS5Q92905 334 aa15.77■□□□□ 0.12
SPCS1-204ENST00000474945 NEK1Q96PY6 1258 aa15.77■□□□□ 0.12
SPCS1-204ENST00000474945 IWS1Q96ST2 819 aa15.77■□□□□ 0.12
SPCS1-204ENST00000474945 MAP3K14Q99558 947 aa15.77■□□□□ 0.12
SPCS1-204ENST00000474945 LZTS2Q9BRK4 669 aa15.77■□□□□ 0.12
SPCS1-204ENST00000474945 SPZ1Q9BXG8 430 aa15.77■□□□□ 0.12
SPCS1-204ENST00000474945 ARIH2O95376 493 aa15.76■□□□□ 0.11
SPCS1-204ENST00000474945 ITGB8P26012 769 aa15.76■□□□□ 0.11
SPCS1-204ENST00000474945 GNAQP50148 359 aa15.76■□□□□ 0.11
SPCS1-204ENST00000474945 GHRHRQ02643 423 aa15.76■□□□□ 0.11
SPCS1-204ENST00000474945 FPGSQ05932 587 aa15.76■□□□□ 0.11
SPCS1-204ENST00000474945 ITGA7Q13683 1181 aa15.76■□□□□ 0.11
SPCS1-204ENST00000474945 KRT32Q14532 448 aa15.76■□□□□ 0.11
SPCS1-204ENST00000474945 LRIT3Q3SXY7 679 aa15.76■□□□□ 0.11
SPCS1-204ENST00000474945 FAM126BQ8IXS8 530 aa15.76■□□□□ 0.11
SPCS1-204ENST00000474945 TCEANC2Q96MN5 208 aa15.76■□□□□ 0.11
SPCS1-204ENST00000474945 POLR3EQ9NVU0 708 aa15.76■□□□□ 0.11
SPCS1-204ENST00000474945 TBX21Q9UL17 535 aa15.76■□□□□ 0.11
SPCS1-204ENST00000474945 NR3C2P08235 984 aa15.75■□□□□ 0.11
SPCS1-204ENST00000474945 MYCLP12524 364 aaPredicted RBP15.75■□□□□ 0.11
SPCS1-204ENST00000474945 CDK7P50613 346 aa15.75■□□□□ 0.11
SPCS1-204ENST00000474945 PURAQ00577 322 aaKnown RBP15.75■□□□□ 0.11
SPCS1-204ENST00000474945 SYNE3Q6ZMZ3 975 aa15.75■□□□□ 0.11
SPCS1-204ENST00000474945 FCHSD1Q86WN1 690 aa15.75■□□□□ 0.11
SPCS1-204ENST00000474945 RASEFQ8IZ41 740 aa15.75■□□□□ 0.11
SPCS1-204ENST00000474945 CMTR1Q8N1G2 835 aaKnown RBP15.75■□□□□ 0.11
SPCS1-204ENST00000474945 PPP1R12CQ9BZL4 782 aa15.75■□□□□ 0.11
SPCS1-204ENST00000474945 MRVI1Q9Y6F6 885 aa15.75■□□□□ 0.11
SPCS1-204ENST00000474945 GH1P01241 217 aa15.74■□□□□ 0.11
SPCS1-204ENST00000474945 FGD1P98174 961 aa15.74■□□□□ 0.11
SPCS1-204ENST00000474945 LY6KQ17RY6 165 aa15.74■□□□□ 0.11
SPCS1-204ENST00000474945 ADCK5Q3MIX3 580 aa15.74■□□□□ 0.11
SPCS1-204ENST00000474945 FAM47CQ5HY64 1035 aa15.74■□□□□ 0.11
SPCS1-204ENST00000474945 C9orf50Q5SZB4 431 aa15.74■□□□□ 0.11
SPCS1-204ENST00000474945 SGMS1Q86VZ5 419 aa15.74■□□□□ 0.11
SPCS1-204ENST00000474945 IL31RAQ8NI17 732 aa15.74■□□□□ 0.11
SPCS1-204ENST00000474945 PDCD2LQ9BRP1 358 aa15.74■□□□□ 0.11
SPCS1-204ENST00000474945 MTG1Q9BT17 334 aaPredicted RBP15.74■□□□□ 0.11
SPCS1-204ENST00000474945 MAP3K20Q9NYL2 800 aaKnown RBP15.74■□□□□ 0.11
SPCS1-204ENST00000474945 BAZ2BQ9UIF8 2168 aaKnown RBP15.73■□□□□ 0.11
SPCS1-204ENST00000474945 EIF3JO75822 258 aaKnown RBP15.73■□□□□ 0.11
SPCS1-204ENST00000474945 REC8O95072 547 aa15.73■□□□□ 0.11
SPCS1-204ENST00000474945 CCND2P30279 289 aa15.73■□□□□ 0.11
SPCS1-204ENST00000474945 CHMP4BP1P59074 171 aa15.73■□□□□ 0.11
SPCS1-204ENST00000474945 PGM5Q15124 567 aa15.73■□□□□ 0.11
SPCS1-204ENST00000474945 APOA5Q6Q788 366 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms