RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 DNAJC25-GNG10A0A024R161 153 aa11.46□□□□□ -0.57
COL8A1-206ENST00000474648 POTEFA5A3E0 1075 aa11.46□□□□□ -0.57
COL8A1-206ENST00000474648 FAM205CA6NFA0 338 aa11.46□□□□□ -0.57
COL8A1-206ENST00000474648 STRNO43815 780 aa11.46□□□□□ -0.57
COL8A1-206ENST00000474648 PTPREP23469 700 aa11.46□□□□□ -0.57
COL8A1-206ENST00000474648 MAPK4P31152 587 aa11.46□□□□□ -0.57
COL8A1-206ENST00000474648 MAP2K1Q02750 393 aaPredicted RBP11.46□□□□□ -0.57
COL8A1-206ENST00000474648 LHX8Q68G74 356 aa11.46□□□□□ -0.57
COL8A1-206ENST00000474648 MCTP1Q6DN14 999 aa11.46□□□□□ -0.57
COL8A1-206ENST00000474648 SLC30A10Q6XR72 485 aa11.46□□□□□ -0.57
COL8A1-206ENST00000474648 GPR142Q7Z601 462 aa11.46□□□□□ -0.57
COL8A1-206ENST00000474648 PLEKHH3Q7Z736 793 aa11.46□□□□□ -0.57
COL8A1-206ENST00000474648 NOSTRINQ8IVI9 506 aa11.46□□□□□ -0.57
COL8A1-206ENST00000474648 REXO1Q8N1G1 1221 aaKnown RBP11.46□□□□□ -0.57
COL8A1-206ENST00000474648 PGBD1Q96JS3 809 aa11.46□□□□□ -0.57
COL8A1-206ENST00000474648 TAAR1Q96RJ0 339 aa11.46□□□□□ -0.57
COL8A1-206ENST00000474648 MMP19Q99542 508 aa11.46□□□□□ -0.57
COL8A1-206ENST00000474648 SMCHD1A6NHR9 2005 aa11.46□□□□□ -0.57
COL8A1-206ENST00000474648 THSD7BQ9C0I4 1608 aa11.46□□□□□ -0.58
COL8A1-206ENST00000474648 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.45□□□□□ -0.58
COL8A1-206ENST00000474648 SOWAHBA6NEL2 793 aa11.45□□□□□ -0.58
COL8A1-206ENST00000474648 POTEB2H3BUK9 544 aa11.45□□□□□ -0.58
COL8A1-206ENST00000474648 GPR25O00155 361 aa11.45□□□□□ -0.58
COL8A1-206ENST00000474648 COBLO75128 1261 aa11.45□□□□□ -0.58
COL8A1-206ENST00000474648 F13A1P00488 732 aa11.45□□□□□ -0.58
COL8A1-206ENST00000474648 FOSP01100 380 aaPredicted RBP11.45□□□□□ -0.58
COL8A1-206ENST00000474648 FCER1AP12319 257 aa11.45□□□□□ -0.58
COL8A1-206ENST00000474648 CNTN2Q02246 1040 aa11.45□□□□□ -0.58
COL8A1-206ENST00000474648 SP3Q02447 781 aa11.45□□□□□ -0.58
COL8A1-206ENST00000474648 AP3B2Q13367 1082 aa11.45□□□□□ -0.58
COL8A1-206ENST00000474648 MORN1Q5T089 497 aa11.45□□□□□ -0.58
COL8A1-206ENST00000474648 FCHSD1Q86WN1 690 aa11.45□□□□□ -0.58
COL8A1-206ENST00000474648 ABRAQ8N0Z2 381 aa11.45□□□□□ -0.58
COL8A1-206ENST00000474648 ANKRD35Q8N283 1001 aa11.45□□□□□ -0.58
COL8A1-206ENST00000474648 FAM133AQ8N9E0 248 aa11.45□□□□□ -0.58
COL8A1-206ENST00000474648 CRYGNQ8WXF5 182 aa11.45□□□□□ -0.58
COL8A1-206ENST00000474648 USP6NLQ92738 828 aa11.45□□□□□ -0.58
COL8A1-206ENST00000474648 ZFP91Q96JP5 570 aaPredicted RBP11.45□□□□□ -0.58
COL8A1-206ENST00000474648 FGD4Q96M96 766 aa11.45□□□□□ -0.58
COL8A1-206ENST00000474648 ARHGAP39Q9C0H5 1083 aa11.45□□□□□ -0.58
COL8A1-206ENST00000474648 ZSCAN16Q9H4T2 348 aaPredicted RBP11.45□□□□□ -0.58
COL8A1-206ENST00000474648 BRMS1Q9HCU9 246 aa11.45□□□□□ -0.58
COL8A1-206ENST00000474648 GJD2Q9UKL4 321 aa11.45□□□□□ -0.58
COL8A1-206ENST00000474648 ASTN1O14525 1302 aa11.44□□□□□ -0.58
COL8A1-206ENST00000474648 RPTORQ8N122 1335 aa11.44□□□□□ -0.58
COL8A1-206ENST00000474648 SLC15A5A6NIM6 579 aa11.44□□□□□ -0.58
COL8A1-206ENST00000474648 PGK2P07205 417 aa11.44□□□□□ -0.58
COL8A1-206ENST00000474648 TOB1P50616 345 aaPredicted RBP11.44□□□□□ -0.58
COL8A1-206ENST00000474648 LACTBP83111 547 aaPredicted RBP11.44□□□□□ -0.58
COL8A1-206ENST00000474648 GRB14Q14449 540 aa11.44□□□□□ -0.58
COL8A1-206ENST00000474648 KCTD2Q14681 263 aa11.44□□□□□ -0.58
COL8A1-206ENST00000474648 ZNF792Q3KQV3 632 aa11.44□□□□□ -0.58
COL8A1-206ENST00000474648 IER5LQ5T953 404 aa11.44□□□□□ -0.58
COL8A1-206ENST00000474648 WDR78Q5VTH9 848 aa11.44□□□□□ -0.58
COL8A1-206ENST00000474648 MCTP2Q6DN12 878 aa11.44□□□□□ -0.58
COL8A1-206ENST00000474648 FAM173BQ6P4H8 233 aa11.44□□□□□ -0.58
COL8A1-206ENST00000474648 PIK3AP1Q6ZUJ8 805 aa11.44□□□□□ -0.58
COL8A1-206ENST00000474648 KRT25Q7Z3Z0 450 aa11.44□□□□□ -0.58
COL8A1-206ENST00000474648 CCAR1Q8IX12 1150 aaKnown RBP11.44□□□□□ -0.58
COL8A1-206ENST00000474648 JMYQ8N9B5 988 aa11.44□□□□□ -0.58
COL8A1-206ENST00000474648 TRIM47Q96LD4 638 aa11.44□□□□□ -0.58
COL8A1-206ENST00000474648 ANO3Q9BYT9 981 aa11.44□□□□□ -0.58
COL8A1-206ENST00000474648 COLQQ9Y215 455 aaPredicted RBP11.44□□□□□ -0.58
COL8A1-206ENST00000474648 PFASO15067 1338 aa11.43□□□□□ -0.58
COL8A1-206ENST00000474648 FRMPD4Q14CM0 1322 aa11.43□□□□□ -0.58
COL8A1-206ENST00000474648 CCDC194A0A1B0GVG4 234 aa11.43□□□□□ -0.58
COL8A1-206ENST00000474648 WNT7AO00755 349 aa11.43□□□□□ -0.58
COL8A1-206ENST00000474648 ADORA2AP29274 412 aa11.43□□□□□ -0.58
COL8A1-206ENST00000474648 SREBF1P36956 1147 aa11.43□□□□□ -0.58
COL8A1-206ENST00000474648 PSMC4P43686 418 aa11.43□□□□□ -0.58
COL8A1-206ENST00000474648 NONOQ15233 471 aaKnown RBP eCLIP11.43□□□□□ -0.58
COL8A1-206ENST00000474648 INF2Q27J81 1249 aa11.43□□□□□ -0.58
COL8A1-206ENST00000474648 MYSM1Q5VVJ2 828 aa11.43□□□□□ -0.58
COL8A1-206ENST00000474648 BRAPQ7Z569 592 aa11.43□□□□□ -0.58
COL8A1-206ENST00000474648 TBCKQ8TEA7 893 aa11.43□□□□□ -0.58
COL8A1-206ENST00000474648 RMDN3Q96TC7 470 aa11.43□□□□□ -0.58
COL8A1-206ENST00000474648 COL11A1P12107 1806 aaPredicted RBP11.43□□□□□ -0.58
COL8A1-206ENST00000474648 SPDYE3A6NKU9 549 aa11.42□□□□□ -0.58
COL8A1-206ENST00000474648 FKTNO75072 461 aa11.42□□□□□ -0.58
COL8A1-206ENST00000474648 CYP3A4P08684 503 aa11.42□□□□□ -0.58
COL8A1-206ENST00000474648 USP11P51784 963 aa11.42□□□□□ -0.58
COL8A1-206ENST00000474648 FCGRTP55899 365 aa11.42□□□□□ -0.58
COL8A1-206ENST00000474648 MAP2K5Q13163 448 aa11.42□□□□□ -0.58
COL8A1-206ENST00000474648 GNL2Q13823 731 aaKnown RBP11.42□□□□□ -0.58
COL8A1-206ENST00000474648 VSIG10LQ86VR7 867 aa11.42□□□□□ -0.58
COL8A1-206ENST00000474648 DNERQ8NFT8 737 aa11.42□□□□□ -0.58
COL8A1-206ENST00000474648 IL31RAQ8NI17 732 aa11.42□□□□□ -0.58
COL8A1-206ENST00000474648 NPLOC4Q8TAT6 608 aa11.42□□□□□ -0.58
COL8A1-206ENST00000474648 NSUN6Q8TEA1 469 aaKnown RBP11.42□□□□□ -0.58
COL8A1-206ENST00000474648 ZNF296Q8WUU4 475 aaPredicted RBP11.42□□□□□ -0.58
COL8A1-206ENST00000474648 CHAMP1Q96JM3 812 aa11.42□□□□□ -0.58
COL8A1-206ENST00000474648 PDCD2LQ9BRP1 358 aa11.42□□□□□ -0.58
COL8A1-206ENST00000474648 PXMP2Q9NR77 195 aa11.42□□□□□ -0.58
COL8A1-206ENST00000474648 TSKSQ9UJT2 592 aa11.42□□□□□ -0.58
COL8A1-206ENST00000474648 DDX49Q9Y6V7 483 aaKnown RBP11.42□□□□□ -0.58
COL8A1-206ENST00000474648 IVNS1ABPQ9Y6Y0 642 aa11.42□□□□□ -0.58
COL8A1-206ENST00000474648 CEP350Q5VT06 3117 aa11.41□□□□□ -0.58
COL8A1-206ENST00000474648 CYP3A7-CYP3A51PA0A087WV96 503 aa11.41□□□□□ -0.58
COL8A1-206ENST00000474648 TNPO2O14787 897 aaKnown RBP11.41□□□□□ -0.58
COL8A1-206ENST00000474648 IGHA2P01877 340 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms