RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 IQCB1Q15051 598 aa22.34■■□□□ 1.17
SSR1-204ENST00000474597 NT5DC1Q5TFE4 455 aa22.34■■□□□ 1.17
SSR1-204ENST00000474597 RBM46Q8TBY0 533 aaKnown RBP22.34■■□□□ 1.17
SSR1-204ENST00000474597 TRIM44Q96DX7 344 aaPredicted RBP22.34■■□□□ 1.17
SSR1-204ENST00000474597 CDCA5Q96FF9 252 aa22.34■■□□□ 1.17
SSR1-204ENST00000474597 CALML4Q96GE6 196 aa22.34■■□□□ 1.17
SSR1-204ENST00000474597 TAF1DQ9H5J8 278 aaPredicted RBP22.34■■□□□ 1.17
SSR1-204ENST00000474597 RAVER2Q9HCJ3 691 aaKnown RBP22.34■■□□□ 1.17
SSR1-204ENST00000474597 LRWD1Q9UFC0 647 aa22.34■■□□□ 1.17
SSR1-204ENST00000474597 SNCAIPQ9Y6H5 919 aa22.34■■□□□ 1.17
SSR1-204ENST00000474597 OTOFQ9HC10 1997 aa22.33■■□□□ 1.17
SSR1-204ENST00000474597 ALAS1P13196 640 aa22.33■■□□□ 1.16
SSR1-204ENST00000474597 TTLL12Q14166 644 aaPredicted RBP22.33■■□□□ 1.16
SSR1-204ENST00000474597 PDIA5Q14554 519 aa22.33■■□□□ 1.16
SSR1-204ENST00000474597 PDXDC2PQ6P474 469 aa22.33■■□□□ 1.16
SSR1-204ENST00000474597 TRIML1Q8N9V2 468 aa22.33■■□□□ 1.16
SSR1-204ENST00000474597 TBC1D5Q92609 795 aa22.33■■□□□ 1.16
SSR1-204ENST00000474597 BPIFA3Q9BQP9 254 aa22.33■■□□□ 1.16
SSR1-204ENST00000474597 MAN1B1Q9UKM7 699 aa22.33■■□□□ 1.16
SSR1-204ENST00000474597 SARSP49591 514 aaKnown RBP22.32■■□□□ 1.16
SSR1-204ENST00000474597 PNMA8AQ86V59 439 aaPredicted RBP22.32■■□□□ 1.16
SSR1-204ENST00000474597 MCF2L2Q86YR7 1114 aa22.32■■□□□ 1.16
SSR1-204ENST00000474597 SLFN12Q8IYM2 578 aa22.32■■□□□ 1.16
SSR1-204ENST00000474597 CRYGNQ8WXF5 182 aa22.32■■□□□ 1.16
SSR1-204ENST00000474597 PCDHA12Q9UN75 941 aa22.32■■□□□ 1.16
SSR1-204ENST00000474597 ADCY5O95622 1261 aa22.31■■□□□ 1.16
SSR1-204ENST00000474597 PRR16Q569H4 304 aa22.31■■□□□ 1.16
SSR1-204ENST00000474597 AOPEPQ8N6M6 819 aa22.31■■□□□ 1.16
SSR1-204ENST00000474597 HAS1Q92839 578 aa22.31■■□□□ 1.16
SSR1-204ENST00000474597 ATG4CQ96DT6 458 aa22.31■■□□□ 1.16
SSR1-204ENST00000474597 PDLIM2Q96JY6 352 aa22.31■■□□□ 1.16
SSR1-204ENST00000474597 MBOAT7Q96N66 472 aa22.31■■□□□ 1.16
SSR1-204ENST00000474597 PLIN2Q99541 437 aa22.31■■□□□ 1.16
SSR1-204ENST00000474597 CUEDC2Q9H467 287 aa22.31■■□□□ 1.16
SSR1-204ENST00000474597 DACH1Q9UI36 760 aa22.31■■□□□ 1.16
SSR1-204ENST00000474597 WDR90Q96KV7 1748 aa22.31■■□□□ 1.16
SSR1-204ENST00000474597 VWA5AO00534 786 aa22.31■■□□□ 1.16
SSR1-204ENST00000474597 CYP3A4P08684 503 aa22.31■■□□□ 1.16
SSR1-204ENST00000474597 Q4G0T1 1027 aa22.31■■□□□ 1.16
SSR1-204ENST00000474597 STAMQ92783 540 aa22.31■■□□□ 1.16
SSR1-204ENST00000474597 CDK5RAP3Q96JB5 506 aa22.31■■□□□ 1.16
SSR1-204ENST00000474597 MAGEF1Q9HAY2 307 aa22.31■■□□□ 1.16
SSR1-204ENST00000474597 PAPPA2Q9BXP8 1791 aa22.3■■□□□ 1.16
SSR1-204ENST00000474597 POTEMA6NI47 508 aa22.3■■□□□ 1.16
SSR1-204ENST00000474597 SMTNL1A8MU46 457 aa22.3■■□□□ 1.16
SSR1-204ENST00000474597 GTPBP6O43824 516 aaPredicted RBP22.3■■□□□ 1.16
SSR1-204ENST00000474597 PLCG1P19174 1290 aa22.3■■□□□ 1.16
SSR1-204ENST00000474597 CIITAP33076 1130 aa22.3■■□□□ 1.16
SSR1-204ENST00000474597 TPM4P67936 248 aa22.3■■□□□ 1.16
SSR1-204ENST00000474597 DPYDQ12882 1025 aa22.3■■□□□ 1.16
SSR1-204ENST00000474597 COG2Q14746 738 aa22.3■■□□□ 1.16
SSR1-204ENST00000474597 SH3D19Q5HYK7 790 aa22.3■■□□□ 1.16
SSR1-204ENST00000474597 KRT79Q5XKE5 535 aa22.3■■□□□ 1.16
SSR1-204ENST00000474597 DHX40Q8IX18 779 aaKnown RBP22.3■■□□□ 1.16
SSR1-204ENST00000474597 ANKRD13AQ8IZ07 590 aa22.3■■□□□ 1.16
SSR1-204ENST00000474597 SPATA20Q8TB22 786 aa22.3■■□□□ 1.16
SSR1-204ENST00000474597 GSDMAQ96QA5 445 aa22.3■■□□□ 1.16
SSR1-204ENST00000474597 HOMER2Q9NSB8 354 aa22.3■■□□□ 1.16
SSR1-204ENST00000474597 RBBP6Q7Z6E9 1792 aaKnown RBP22.3■■□□□ 1.16
SSR1-204ENST00000474597 DSG3P32926 999 aa22.29■■□□□ 1.16
SSR1-204ENST00000474597 KCNMB3Q9NPA1 279 aa22.29■■□□□ 1.16
SSR1-204ENST00000474597 CLEC11AQ9Y240 323 aa22.29■■□□□ 1.16
SSR1-204ENST00000474597 COL11A1P12107 1806 aaPredicted RBP22.29■■□□□ 1.16
SSR1-204ENST00000474597 TBX3O15119 743 aa22.29■■□□□ 1.16
SSR1-204ENST00000474597 HSD17B4P51659 736 aa22.29■■□□□ 1.16
SSR1-204ENST00000474597 MORC3Q14149 939 aa22.29■■□□□ 1.16
SSR1-204ENST00000474597 CATSPERGQ6ZRH7 1159 aa22.29■■□□□ 1.16
SSR1-204ENST00000474597 SNX29Q8TEQ0 813 aa22.29■■□□□ 1.16
SSR1-204ENST00000474597 ELP3Q9H9T3 547 aa22.29■■□□□ 1.16
SSR1-204ENST00000474597 PTPRFP10586 1907 aa22.28■■□□□ 1.16
SSR1-204ENST00000474597 NFIBO00712 420 aa22.28■■□□□ 1.16
SSR1-204ENST00000474597 CASP1P29466 404 aa22.28■■□□□ 1.16
SSR1-204ENST00000474597 SAMD3Q8N6K7 520 aa22.28■■□□□ 1.16
SSR1-204ENST00000474597 MLKLQ8NB16 471 aa22.28■■□□□ 1.16
SSR1-204ENST00000474597 CLEC4DQ8WXI8 215 aa22.28■■□□□ 1.16
SSR1-204ENST00000474597 MMTAG2Q9BU76 263 aaKnown RBP22.28■■□□□ 1.16
SSR1-204ENST00000474597 BLZF1Q9H2G9 400 aa22.28■■□□□ 1.16
SSR1-204ENST00000474597 RABGAP1Q9Y3P9 1069 aa22.28■■□□□ 1.16
SSR1-204ENST00000474597 RLFQ13129 1914 aa22.28■■□□□ 1.16
SSR1-204ENST00000474597 SRCAPQ6ZRS2 3230 aa22.27■■□□□ 1.16
SSR1-204ENST00000474597 FAM86B1E9PN63 330 aa22.27■■□□□ 1.16
SSR1-204ENST00000474597 FAM86B2P0C5J1 330 aa22.27■■□□□ 1.16
SSR1-204ENST00000474597 NAALADL2Q58DX5 795 aa22.27■■□□□ 1.16
SSR1-204ENST00000474597 ARMC9Q7Z3E5 817 aa22.27■■□□□ 1.16
SSR1-204ENST00000474597 GJA10Q969M2 543 aa22.27■■□□□ 1.16
SSR1-204ENST00000474597 FAM20AQ96MK3 541 aa22.27■■□□□ 1.16
SSR1-204ENST00000474597 TRERF1Q96PN7 1200 aa22.27■■□□□ 1.16
SSR1-204ENST00000474597 HOXC10Q9NYD6 342 aa22.27■■□□□ 1.16
SSR1-204ENST00000474597 MAP3K20Q9NYL2 800 aaKnown RBP22.27■■□□□ 1.16
SSR1-204ENST00000474597 MYL1P05976 194 aa22.27■■□□□ 1.15
SSR1-204ENST00000474597 OAZ1P54368 228 aa22.27■■□□□ 1.15
SSR1-204ENST00000474597 PPATQ06203 517 aa22.27■■□□□ 1.15
SSR1-204ENST00000474597 ERO1BQ86YB8 467 aa22.27■■□□□ 1.15
SSR1-204ENST00000474597 RMND1Q9NWS8 449 aa22.27■■□□□ 1.15
SSR1-204ENST00000474597 UBXN2AP68543 259 aa22.26■■□□□ 1.15
SSR1-204ENST00000474597 AMPD3Q01432 767 aa22.26■■□□□ 1.15
SSR1-204ENST00000474597 CUL4BQ13620 913 aa22.26■■□□□ 1.15
SSR1-204ENST00000474597 MUM1L1Q5H9M0 696 aa22.26■■□□□ 1.15
SSR1-204ENST00000474597 ETNPPLQ8TBG4 499 aa22.26■■□□□ 1.15
SSR1-204ENST00000474597 OTUD5Q96G74 571 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms