RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 VEGFBP49765 207 aa11.75□□□□□ -0.53
COL12A1-206ENST00000474564 C1QTNF8P60827 252 aa11.75□□□□□ -0.53
COL12A1-206ENST00000474564 PWP2Q15269 919 aaKnown RBP11.75□□□□□ -0.53
COL12A1-206ENST00000474564 TMEM266Q2M3C6 531 aa11.75□□□□□ -0.53
COL12A1-206ENST00000474564 GNPTABQ3T906 1256 aa11.75□□□□□ -0.53
COL12A1-206ENST00000474564 MOXD1Q6UVY6 613 aa11.75□□□□□ -0.53
COL12A1-206ENST00000474564 PLEKHH3Q7Z736 793 aa11.75□□□□□ -0.53
COL12A1-206ENST00000474564 NLRX1Q86UT6 975 aa11.75□□□□□ -0.53
COL12A1-206ENST00000474564 SYTL5Q8TDW5 730 aaPredicted RBP11.75□□□□□ -0.53
COL12A1-206ENST00000474564 TNFRSF25Q93038 417 aa11.75□□□□□ -0.53
COL12A1-206ENST00000474564 FERMT2Q96AC1 680 aa11.75□□□□□ -0.53
COL12A1-206ENST00000474564 CDHR1Q96JP9 859 aa11.75□□□□□ -0.53
COL12A1-206ENST00000474564 TXNRD2Q9NNW7 524 aa11.75□□□□□ -0.53
COL12A1-206ENST00000474564 A1CFQ9NQ94 594 aaKnown RBP11.75□□□□□ -0.53
COL12A1-206ENST00000474564 CYP39A1Q9NYL5 469 aa11.75□□□□□ -0.53
COL12A1-206ENST00000474564 PTPRFP10586 1907 aa11.74□□□□□ -0.53
COL12A1-206ENST00000474564 BAZ2BQ9UIF8 2168 aaKnown RBP11.74□□□□□ -0.53
COL12A1-206ENST00000474564 SLC15A5A6NIM6 579 aa11.74□□□□□ -0.53
COL12A1-206ENST00000474564 ASB14A6NK59 587 aa11.74□□□□□ -0.53
COL12A1-206ENST00000474564 CNMDO75829 334 aa11.74□□□□□ -0.53
COL12A1-206ENST00000474564 CYP3A4P08684 503 aa11.74□□□□□ -0.53
COL12A1-206ENST00000474564 MYCLP12524 364 aaPredicted RBP11.74□□□□□ -0.53
COL12A1-206ENST00000474564 FCGRTP55899 365 aa11.74□□□□□ -0.53
COL12A1-206ENST00000474564 SETQ01105 290 aaPredicted RBP11.74□□□□□ -0.53
COL12A1-206ENST00000474564 PDE4DQ08499 809 aa11.74□□□□□ -0.53
COL12A1-206ENST00000474564 CRHR2Q13324 411 aa11.74□□□□□ -0.53
COL12A1-206ENST00000474564 SLC39A14Q15043 492 aa11.74□□□□□ -0.53
COL12A1-206ENST00000474564 ZNF174Q15697 407 aa11.74□□□□□ -0.53
COL12A1-206ENST00000474564 NPY5RQ15761 445 aa11.74□□□□□ -0.53
COL12A1-206ENST00000474564 STXBP2Q15833 593 aa11.74□□□□□ -0.53
COL12A1-206ENST00000474564 SKOR2Q2VWA4 1001 aaPredicted RBP11.74□□□□□ -0.53
COL12A1-206ENST00000474564 Q3C1V9 767 aa11.74□□□□□ -0.53
COL12A1-206ENST00000474564 PPP4R3AQ6IN85 833 aa11.74□□□□□ -0.53
COL12A1-206ENST00000474564 FAM173BQ6P4H8 233 aa11.74□□□□□ -0.53
COL12A1-206ENST00000474564 DTHD1Q6ZMT9 781 aa11.74□□□□□ -0.53
COL12A1-206ENST00000474564 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.74□□□□□ -0.53
COL12A1-206ENST00000474564 SLFN12Q8IYM2 578 aa11.74□□□□□ -0.53
COL12A1-206ENST00000474564 CCDC34Q96HJ3 373 aa11.74□□□□□ -0.53
COL12A1-206ENST00000474564 DDX25Q9UHL0 483 aaKnown RBP11.74□□□□□ -0.53
COL12A1-206ENST00000474564 RCOR1Q9UKL0 485 aa11.74□□□□□ -0.53
COL12A1-206ENST00000474564 CNPY2Q9Y2B0 182 aa11.74□□□□□ -0.53
COL12A1-206ENST00000474564 TNPO2O14787 897 aaKnown RBP11.73□□□□□ -0.53
COL12A1-206ENST00000474564 MAFGO15525 162 aa11.73□□□□□ -0.53
COL12A1-206ENST00000474564 PPP6R2O75170 966 aa11.73□□□□□ -0.53
COL12A1-206ENST00000474564 PRPF40AO75400 957 aaKnown RBP11.73□□□□□ -0.53
COL12A1-206ENST00000474564 ELP1O95163 1332 aa11.73□□□□□ -0.53
COL12A1-206ENST00000474564 BCRP11274 1271 aa11.73□□□□□ -0.53
COL12A1-206ENST00000474564 PTPREP23469 700 aa11.73□□□□□ -0.53
COL12A1-206ENST00000474564 TXLNAP40222 546 aa11.73□□□□□ -0.53
COL12A1-206ENST00000474564 NASPP49321 788 aaPredicted RBP11.73□□□□□ -0.53
COL12A1-206ENST00000474564 CALCRLQ16602 461 aa11.73□□□□□ -0.53
COL12A1-206ENST00000474564 TPRNQ4KMQ1 711 aa11.73□□□□□ -0.53
COL12A1-206ENST00000474564 PCNX4Q63HM2 1172 aa11.73□□□□□ -0.53
COL12A1-206ENST00000474564 ARL6IP4Q66PJ3 421 aaKnown RBP11.73□□□□□ -0.53
COL12A1-206ENST00000474564 C17orf99Q6UX52 265 aa11.73□□□□□ -0.53
COL12A1-206ENST00000474564 KRI1Q8N9T8 703 aaKnown RBP11.73□□□□□ -0.53
COL12A1-206ENST00000474564 SOCS4Q8WXH5 440 aa11.73□□□□□ -0.53
COL12A1-206ENST00000474564 TBC1D5Q92609 795 aa11.73□□□□□ -0.53
COL12A1-206ENST00000474564 SHISA4Q96DD7 197 aa11.73□□□□□ -0.53
COL12A1-206ENST00000474564 PGBD1Q96JS3 809 aa11.73□□□□□ -0.53
COL12A1-206ENST00000474564 TAAR1Q96RJ0 339 aa11.73□□□□□ -0.53
COL12A1-206ENST00000474564 USP28Q96RU2 1077 aa11.73□□□□□ -0.53
COL12A1-206ENST00000474564 NUDT12Q9BQG2 462 aa11.73□□□□□ -0.53
COL12A1-206ENST00000474564 EFCC1Q9HA90 598 aa11.73□□□□□ -0.53
COL12A1-206ENST00000474564 PXMP2Q9NR77 195 aa11.73□□□□□ -0.53
COL12A1-206ENST00000474564 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.73□□□□□ -0.53
COL12A1-206ENST00000474564 CLIC4Q9Y696 253 aa11.73□□□□□ -0.53
COL12A1-206ENST00000474564 STK24Q9Y6E0 443 aa11.73□□□□□ -0.53
COL12A1-206ENST00000474564 CYP3A7-CYP3A51PA0A087WV96 503 aa11.72□□□□□ -0.53
COL12A1-206ENST00000474564 OPLAHO14841 1288 aa11.72□□□□□ -0.53
COL12A1-206ENST00000474564 TBX3O15119 743 aa11.72□□□□□ -0.53
COL12A1-206ENST00000474564 CUTAO60888 179 aa11.72□□□□□ -0.53
COL12A1-206ENST00000474564 TRPA1O75762 1119 aa11.72□□□□□ -0.53
COL12A1-206ENST00000474564 EIF3JO75822 258 aaKnown RBP11.72□□□□□ -0.53
COL12A1-206ENST00000474564 NR3C2P08235 984 aa11.72□□□□□ -0.53
COL12A1-206ENST00000474564 EIF2AK2P19525 551 aaKnown RBP11.72□□□□□ -0.53
COL12A1-206ENST00000474564 CYP3A7P24462 503 aa11.72□□□□□ -0.53
COL12A1-206ENST00000474564 SP3Q02447 781 aa11.72□□□□□ -0.53
COL12A1-206ENST00000474564 PTGDRQ13258 359 aa11.72□□□□□ -0.53
COL12A1-206ENST00000474564 CEP55Q53EZ4 464 aa11.72□□□□□ -0.53
COL12A1-206ENST00000474564 PRR16Q569H4 304 aa11.72□□□□□ -0.53
COL12A1-206ENST00000474564 SLC30A10Q6XR72 485 aa11.72□□□□□ -0.53
COL12A1-206ENST00000474564 NIPA1Q7RTP0 329 aa11.72□□□□□ -0.53
COL12A1-206ENST00000474564 GPR142Q7Z601 462 aa11.72□□□□□ -0.53
COL12A1-206ENST00000474564 PLA2G4DQ86XP0 818 aa11.72□□□□□ -0.53
COL12A1-206ENST00000474564 LINC00301Q8NCQ3 95 aa11.72□□□□□ -0.53
COL12A1-206ENST00000474564 LEO1Q8WVC0 666 aaPredicted RBP11.72□□□□□ -0.53
COL12A1-206ENST00000474564 FAM20AQ96MK3 541 aa11.72□□□□□ -0.53
COL12A1-206ENST00000474564 PYM1Q9BRP8 204 aaKnown RBP11.72□□□□□ -0.53
COL12A1-206ENST00000474564 SAGE1Q9NXZ1 904 aa11.72□□□□□ -0.53
COL12A1-206ENST00000474564 FAM13BQ9NYF5 915 aa11.72□□□□□ -0.53
COL12A1-206ENST00000474564 DIS3Q9Y2L1 958 aaKnown RBP11.72□□□□□ -0.53
COL12A1-206ENST00000474564 PCDHB6Q9Y5E3 794 aa11.72□□□□□ -0.53
COL12A1-206ENST00000474564 DDX49Q9Y6V7 483 aaKnown RBP11.72□□□□□ -0.53
COL12A1-206ENST00000474564 UTRNP46939 3433 aa11.72□□□□□ -0.53
COL12A1-206ENST00000474564 MBD3O95983 291 aa11.71□□□□□ -0.53
COL12A1-206ENST00000474564 GNRH1P01148 92 aa11.71□□□□□ -0.53
COL12A1-206ENST00000474564 OR52Z1P0C646 297 aa11.71□□□□□ -0.53
COL12A1-206ENST00000474564 TAL1P17542 331 aaPredicted RBP11.71□□□□□ -0.53
COL12A1-206ENST00000474564 ADORA2AP29274 412 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms