RNA–Protein interactions for RNA: ENST00000474344.1

VANGL1-205, Transcript of VANGL planar cell polarity protein 1, humanhuman

TSL 2

Gene VANGL1, Length 461 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-205ENST00000474344 GJB1P08034 283 aa12□□□□□ -0.49
VANGL1-205ENST00000474344 POLR2MP0CAP2 368 aa12□□□□□ -0.49
VANGL1-205ENST00000474344 CCND3P30281 292 aaPredicted RBP12□□□□□ -0.49
VANGL1-205ENST00000474344 HOXA13P31271 388 aaPredicted RBP12□□□□□ -0.49
VANGL1-205ENST00000474344 CLK2P49760 499 aaKnown RBP12□□□□□ -0.49
VANGL1-205ENST00000474344 SSRP1Q08945 709 aaKnown RBP12□□□□□ -0.49
VANGL1-205ENST00000474344 NPY5RQ15761 445 aa12□□□□□ -0.49
VANGL1-205ENST00000474344 TAPT1Q6NXT6 567 aa12□□□□□ -0.49
VANGL1-205ENST00000474344 FAM177A1Q8N128 213 aaPredicted RBP12□□□□□ -0.49
VANGL1-205ENST00000474344 SMARCC2Q8TAQ2 1214 aa12□□□□□ -0.49
VANGL1-205ENST00000474344 IWS1Q96ST2 819 aa12□□□□□ -0.49
VANGL1-205ENST00000474344 RMDN3Q96TC7 470 aa12□□□□□ -0.49
VANGL1-205ENST00000474344 CRISPLD2Q9H0B8 497 aa12□□□□□ -0.49
VANGL1-205ENST00000474344 ZMYND12Q9H0C1 365 aa12□□□□□ -0.49
VANGL1-205ENST00000474344 XRN2Q9H0D6 950 aaKnown RBP eCLIP12□□□□□ -0.49
VANGL1-205ENST00000474344 ABHD16BQ9H3Z7 469 aa12□□□□□ -0.49
VANGL1-205ENST00000474344 HMX1Q9NP08 348 aaPredicted RBP12□□□□□ -0.49
VANGL1-205ENST00000474344 RIC8AQ9NPQ8 531 aa12□□□□□ -0.49
VANGL1-205ENST00000474344 SH3GLB2Q9NR46 395 aa12□□□□□ -0.49
VANGL1-205ENST00000474344 PXMP2Q9NR77 195 aa12□□□□□ -0.49
VANGL1-205ENST00000474344 BIN2Q9UBW5 565 aaPredicted RBP12□□□□□ -0.49
VANGL1-205ENST00000474344 MYH9P35579 1960 aaKnown RBP11.99□□□□□ -0.49
VANGL1-205ENST00000474344 RBM47A0AV96 593 aaKnown RBP11.99□□□□□ -0.49
VANGL1-205ENST00000474344 POTEFA5A3E0 1075 aa11.99□□□□□ -0.49
VANGL1-205ENST00000474344 SEPT4O43236 478 aa11.99□□□□□ -0.49
VANGL1-205ENST00000474344 NAPAP54920 295 aa11.99□□□□□ -0.49
VANGL1-205ENST00000474344 ACVR2BQ13705 512 aa11.99□□□□□ -0.49
VANGL1-205ENST00000474344 CPLX2Q6PUV4 134 aaKnown RBP11.99□□□□□ -0.49
VANGL1-205ENST00000474344 VSIG10LQ86VR7 867 aa11.99□□□□□ -0.49
VANGL1-205ENST00000474344 TRIM22Q8IYM9 498 aa11.99□□□□□ -0.49
VANGL1-205ENST00000474344 IL31RAQ8NI17 732 aa11.99□□□□□ -0.49
VANGL1-205ENST00000474344 NSUN6Q8TEA1 469 aaKnown RBP11.99□□□□□ -0.49
VANGL1-205ENST00000474344 TMX3Q96JJ7 454 aa11.99□□□□□ -0.49
VANGL1-205ENST00000474344 AIFM3Q96NN9 605 aa11.99□□□□□ -0.49
VANGL1-205ENST00000474344 PDCD2LQ9BRP1 358 aa11.99□□□□□ -0.49
VANGL1-205ENST00000474344 RNF208Q9H0X6 261 aa11.99□□□□□ -0.49
VANGL1-205ENST00000474344 TRIP12Q14669 1992 aaPredicted RBP11.99□□□□□ -0.49
VANGL1-205ENST00000474344 SMCO2A6NFE2 343 aa11.98□□□□□ -0.49
VANGL1-205ENST00000474344 M0R2N6 131 aa11.98□□□□□ -0.49
VANGL1-205ENST00000474344 ADCY6O43306 1168 aa11.98□□□□□ -0.49
VANGL1-205ENST00000474344 JAK2O60674 1132 aa11.98□□□□□ -0.49
VANGL1-205ENST00000474344 CDKL5O76039 1030 aa11.98□□□□□ -0.49
VANGL1-205ENST00000474344 RGS20O76081 388 aa11.98□□□□□ -0.49
VANGL1-205ENST00000474344 SGPL1O95470 568 aa11.98□□□□□ -0.49
VANGL1-205ENST00000474344 NR3C2P08235 984 aa11.98□□□□□ -0.49
VANGL1-205ENST00000474344 GJA8P48165 433 aa11.98□□□□□ -0.49
VANGL1-205ENST00000474344 MCM2P49736 904 aa11.98□□□□□ -0.49
VANGL1-205ENST00000474344 MNX1P50219 401 aaPredicted RBP11.98□□□□□ -0.49
VANGL1-205ENST00000474344 AKAP17AQ02040 695 aaKnown RBP11.98□□□□□ -0.49
VANGL1-205ENST00000474344 CRYGNQ8WXF5 182 aa11.98□□□□□ -0.49
VANGL1-205ENST00000474344 CUL5Q93034 780 aa11.98□□□□□ -0.49
VANGL1-205ENST00000474344 LLPHQ9BRT6 129 aaKnown RBP11.98□□□□□ -0.49
VANGL1-205ENST00000474344 ORC3Q9UBD5 711 aaPredicted RBP11.98□□□□□ -0.49
VANGL1-205ENST00000474344 SCN10AQ9Y5Y9 1956 aa11.98□□□□□ -0.49
VANGL1-205ENST00000474344 EDIL3O43854 480 aa11.97□□□□□ -0.49
VANGL1-205ENST00000474344 MYCP01106 439 aaPredicted RBP11.97□□□□□ -0.49
VANGL1-205ENST00000474344 ADCY7P51828 1080 aa11.97□□□□□ -0.49
VANGL1-205ENST00000474344 MRPL12P52815 198 aaKnown RBP11.97□□□□□ -0.49
VANGL1-205ENST00000474344 NKX3-2P78367 333 aa11.97□□□□□ -0.49
VANGL1-205ENST00000474344 MRPS9P82933 396 aaKnown RBP11.97□□□□□ -0.49
VANGL1-205ENST00000474344 PGM5Q15124 567 aa11.97□□□□□ -0.49
VANGL1-205ENST00000474344 UBE2SQ16763 222 aa11.97□□□□□ -0.49
VANGL1-205ENST00000474344 UBE2Q1Q7Z7E8 422 aa11.97□□□□□ -0.49
VANGL1-205ENST00000474344 FCHSD1Q86WN1 690 aa11.97□□□□□ -0.49
VANGL1-205ENST00000474344 CCDC83Q8IWF9 413 aa11.97□□□□□ -0.49
VANGL1-205ENST00000474344 DEFB118Q96PH6 123 aa11.97□□□□□ -0.49
VANGL1-205ENST00000474344 GLT8D2Q9H1C3 349 aa11.97□□□□□ -0.49
VANGL1-205ENST00000474344 VTA1Q9NP79 307 aa11.97□□□□□ -0.49
VANGL1-205ENST00000474344 PDGFCQ9NRA1 345 aa11.97□□□□□ -0.49
VANGL1-205ENST00000474344 VPS54Q9P1Q0 977 aa11.97□□□□□ -0.49
VANGL1-205ENST00000474344 DDX20Q9UHI6 824 aaKnown RBP11.97□□□□□ -0.49
VANGL1-205ENST00000474344 OGDHLQ9ULD0 1010 aa11.97□□□□□ -0.49
VANGL1-205ENST00000474344 CCDC85CA6NKD9 419 aa11.96□□□□□ -0.49
VANGL1-205ENST00000474344 EIF3JO75822 258 aaKnown RBP11.96□□□□□ -0.49
VANGL1-205ENST00000474344 FOSP01100 380 aaPredicted RBP11.96□□□□□ -0.49
VANGL1-205ENST00000474344 CAPN2P17655 700 aa11.96□□□□□ -0.49
VANGL1-205ENST00000474344 EIF2AK2P19525 551 aaKnown RBP11.96□□□□□ -0.49
VANGL1-205ENST00000474344 CUL4AQ13619 759 aa11.96□□□□□ -0.49
VANGL1-205ENST00000474344 CCDC144BQ3MJ40 725 aa11.96□□□□□ -0.49
VANGL1-205ENST00000474344 TMEM63BQ5T3F8 832 aa11.96□□□□□ -0.49
VANGL1-205ENST00000474344 ARHGEF16Q5VV41 709 aa11.96□□□□□ -0.49
VANGL1-205ENST00000474344 CCDC62Q6P9F0 684 aa11.96□□□□□ -0.49
VANGL1-205ENST00000474344 FBXO16Q8IX29 292 aaPredicted RBP11.96□□□□□ -0.49
VANGL1-205ENST00000474344 DAGLBQ8NCG7 672 aa11.96□□□□□ -0.49
VANGL1-205ENST00000474344 U2AF1L4Q8WU68 220 aaKnown RBP11.96□□□□□ -0.49
VANGL1-205ENST00000474344 CCDC12Q8WUD4 166 aaPredicted RBP11.96□□□□□ -0.49
VANGL1-205ENST00000474344 PHF20Q9BVI0 1012 aa11.96□□□□□ -0.49
VANGL1-205ENST00000474344 TMEM106CQ9BVX2 250 aa11.96□□□□□ -0.49
VANGL1-205ENST00000474344 GJB4Q9NTQ9 266 aa11.96□□□□□ -0.49
VANGL1-205ENST00000474344 PCDHA6Q9UN73 950 aa11.96□□□□□ -0.49
VANGL1-205ENST00000474344 GNEQ9Y223 722 aaKnown RBP11.96□□□□□ -0.49
VANGL1-205ENST00000474344 CNPY2Q9Y2B0 182 aa11.96□□□□□ -0.49
VANGL1-205ENST00000474344 PCDHA8Q9Y5H6 950 aa11.96□□□□□ -0.49
VANGL1-205ENST00000474344 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.95□□□□□ -0.5
VANGL1-205ENST00000474344 B4DLN1 442 aa11.95□□□□□ -0.5
VANGL1-205ENST00000474344 CTAGE5O15320 804 aa11.95□□□□□ -0.5
VANGL1-205ENST00000474344 MSCO60682 206 aa11.95□□□□□ -0.5
VANGL1-205ENST00000474344 DUSP11O75319 330 aaKnown RBP11.95□□□□□ -0.5
VANGL1-205ENST00000474344 EN2P19622 333 aaPredicted RBP11.95□□□□□ -0.5
VANGL1-205ENST00000474344 RGS19P49795 217 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms