RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 PRR31Q5SQ13 230 aa4.03□□□□□ -1.76
CCDC39-203ENST00000473854 AP5M1Q9H0R1 490 aa4.03□□□□□ -1.76
CCDC39-203ENST00000473854 TMEM168Q9H0V1 697 aa4.03□□□□□ -1.76
CCDC39-203ENST00000473854 RXFP1Q9HBX9 757 aa4.03□□□□□ -1.76
CCDC39-203ENST00000473854 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.03□□□□□ -1.76
CCDC39-203ENST00000473854 A0A087WZG4 1122 aa4.02□□□□□ -1.77
CCDC39-203ENST00000473854 MINDY4BA8MYZ0 360 aa4.02□□□□□ -1.77
CCDC39-203ENST00000473854 NPIPB8E9PQR5 432 aa4.02□□□□□ -1.77
CCDC39-203ENST00000473854 ZNF202O95125 648 aa4.02□□□□□ -1.77
CCDC39-203ENST00000473854 ITGA4P13612 1032 aa4.02□□□□□ -1.77
CCDC39-203ENST00000473854 ZNF165P49910 485 aa4.02□□□□□ -1.77
CCDC39-203ENST00000473854 PMS1P54277 932 aaKnown RBP4.02□□□□□ -1.77
CCDC39-203ENST00000473854 INHBCP55103 352 aa4.02□□□□□ -1.77
CCDC39-203ENST00000473854 ITGA1P56199 1179 aa4.02□□□□□ -1.77
CCDC39-203ENST00000473854 XPCQ01831 940 aaPredicted RBP4.02□□□□□ -1.77
CCDC39-203ENST00000473854 PRKD1Q15139 912 aaPredicted RBP4.02□□□□□ -1.77
CCDC39-203ENST00000473854 INTS3Q68E01 1043 aaKnown RBP4.02□□□□□ -1.77
CCDC39-203ENST00000473854 PKN3Q6P5Z2 889 aa4.02□□□□□ -1.77
CCDC39-203ENST00000473854 CD300LDQ6UXZ3 194 aa4.02□□□□□ -1.77
CCDC39-203ENST00000473854 MIB1Q86YT6 1006 aa4.02□□□□□ -1.77
CCDC39-203ENST00000473854 FIBCD1Q8N539 461 aa4.02□□□□□ -1.77
CCDC39-203ENST00000473854 RNF34Q969K3 372 aa4.02□□□□□ -1.77
CCDC39-203ENST00000473854 WRNIP1Q96S55 665 aa4.02□□□□□ -1.77
CCDC39-203ENST00000473854 L2HGDHQ9H9P8 463 aa4.02□□□□□ -1.77
CCDC39-203ENST00000473854 GP6Q9HCN6 339 aa4.02□□□□□ -1.77
CCDC39-203ENST00000473854 PARP2Q9UGN5 583 aa4.02□□□□□ -1.77
CCDC39-203ENST00000473854 RWDD3Q9Y3V2 267 aa4.02□□□□□ -1.77
CCDC39-203ENST00000473854 SHOXO15266 292 aa4.01□□□□□ -1.77
CCDC39-203ENST00000473854 IFNGR1P15260 489 aa4.01□□□□□ -1.77
CCDC39-203ENST00000473854 ZNF28P17035 718 aa4.01□□□□□ -1.77
CCDC39-203ENST00000473854 ZNF445P59923 1031 aa4.01□□□□□ -1.77
CCDC39-203ENST00000473854 NANOS3P60323 173 aaKnown RBP4.01□□□□□ -1.77
CCDC39-203ENST00000473854 RNF207Q6ZRF8 634 aa4.01□□□□□ -1.77
CCDC39-203ENST00000473854 TMC4Q7Z404 712 aa4.01□□□□□ -1.77
CCDC39-203ENST00000473854 DNAJC10Q8IXB1 793 aa4.01□□□□□ -1.77
CCDC39-203ENST00000473854 MTA3Q9BTC8 594 aa4.01□□□□□ -1.77
CCDC39-203ENST00000473854 PCSK5Q92824 1860 aa4.01□□□□□ -1.77
CCDC39-203ENST00000473854 CTSHP09668 335 aa4□□□□□ -1.77
CCDC39-203ENST00000473854 ATXN1P54253 815 aaKnown RBP4□□□□□ -1.77
CCDC39-203ENST00000473854 GK5Q6ZS86 529 aa4□□□□□ -1.77
CCDC39-203ENST00000473854 KBTBD2Q8IY47 623 aa4□□□□□ -1.77
CCDC39-203ENST00000473854 KLHL36Q8N4N3 616 aa4□□□□□ -1.77
CCDC39-203ENST00000473854 YTHDC1Q96MU7 727 aaKnown RBP4□□□□□ -1.77
CCDC39-203ENST00000473854 SLC9A7Q96T83 725 aa4□□□□□ -1.77
CCDC39-203ENST00000473854 TRIM8Q9BZR9 551 aa4□□□□□ -1.77
CCDC39-203ENST00000473854 BARX1Q9HBU1 254 aaPredicted RBP4□□□□□ -1.77
CCDC39-203ENST00000473854 DIS3Q9Y2L1 958 aaKnown RBP4□□□□□ -1.77
CCDC39-203ENST00000473854 C9IYK1 514 aa3.99□□□□□ -1.77
CCDC39-203ENST00000473854 NPHS1O60500 1241 aa3.99□□□□□ -1.77
CCDC39-203ENST00000473854 GREM1O60565 184 aa3.99□□□□□ -1.77
CCDC39-203ENST00000473854 CD247P20963 164 aa3.99□□□□□ -1.77
CCDC39-203ENST00000473854 EIF4A3P38919 411 aaKnown RBP3.99□□□□□ -1.77
CCDC39-203ENST00000473854 SEPHS1P49903 392 aa3.99□□□□□ -1.77
CCDC39-203ENST00000473854 TCEAL1Q15170 157 aa3.99□□□□□ -1.77
CCDC39-203ENST00000473854 FBXL19Q6PCT2 694 aa3.99□□□□□ -1.77
CCDC39-203ENST00000473854 FAM126BQ8IXS8 530 aa3.99□□□□□ -1.77
CCDC39-203ENST00000473854 TAB3Q8N5C8 712 aaPredicted RBP3.99□□□□□ -1.77
CCDC39-203ENST00000473854 Q8TCH9 128 aa3.99□□□□□ -1.77
CCDC39-203ENST00000473854 SEC14L1Q92503 715 aa3.99□□□□□ -1.77
CCDC39-203ENST00000473854 BRF1Q92994 677 aa3.99□□□□□ -1.77
CCDC39-203ENST00000473854 MBD6Q96DN6 1003 aa3.99□□□□□ -1.77
CCDC39-203ENST00000473854 ZNF503Q96F45 646 aa3.99□□□□□ -1.77
CCDC39-203ENST00000473854 WWC2-AS2Q96NR7 200 aa3.99□□□□□ -1.77
CCDC39-203ENST00000473854 CLIC6Q96NY7 704 aa3.99□□□□□ -1.77
CCDC39-203ENST00000473854 CRAMP1Q96RY5 1269 aa3.99□□□□□ -1.77
CCDC39-203ENST00000473854 FTSJ1Q9UET6 329 aa3.99□□□□□ -1.77
CCDC39-203ENST00000473854 ZFR2Q9UPR6 939 aaKnown RBP3.99□□□□□ -1.77
CCDC39-203ENST00000473854 TNFRSF18Q9Y5U5 241 aa3.99□□□□□ -1.77
CCDC39-203ENST00000473854 A0A087X1B8 175 aa3.98□□□□□ -1.77
CCDC39-203ENST00000473854 AURKAO14965 403 aa3.98□□□□□ -1.77
CCDC39-203ENST00000473854 IMPDH2P12268 514 aa3.98□□□□□ -1.77
CCDC39-203ENST00000473854 PAMP19021 973 aa3.98□□□□□ -1.77
CCDC39-203ENST00000473854 MCM4P33991 863 aa3.98□□□□□ -1.77
CCDC39-203ENST00000473854 NKX3-2P78367 333 aa3.98□□□□□ -1.77
CCDC39-203ENST00000473854 CLCQ05315 142 aa3.98□□□□□ -1.77
CCDC39-203ENST00000473854 ZDHHC15Q96MV8 337 aa3.98□□□□□ -1.77
CCDC39-203ENST00000473854 YIPF4Q9BSR8 244 aa3.98□□□□□ -1.77
CCDC39-203ENST00000473854 CSRNP2Q9H175 543 aa3.98□□□□□ -1.77
CCDC39-203ENST00000473854 IKZF4Q9H2S9 585 aa3.98□□□□□ -1.77
CCDC39-203ENST00000473854 NOL6Q9H6R4 1146 aaKnown RBP3.98□□□□□ -1.77
CCDC39-203ENST00000473854 SEC61A2Q9H9S3 476 aa3.98□□□□□ -1.77
CCDC39-203ENST00000473854 MRS2Q9HD23 443 aa3.98□□□□□ -1.77
CCDC39-203ENST00000473854 RNF19AQ9NV58 838 aa3.98□□□□□ -1.77
CCDC39-203ENST00000473854 KBTBD4Q9NVX7 518 aa3.98□□□□□ -1.77
CCDC39-203ENST00000473854 GULP1Q9UBP9 304 aa3.98□□□□□ -1.77
CCDC39-203ENST00000473854 NPHP3-ACAD11A0A0J9YXS1 232 aa3.97□□□□□ -1.77
CCDC39-203ENST00000473854 SORBS3O60504 671 aa3.97□□□□□ -1.77
CCDC39-203ENST00000473854 NTRK1P04629 796 aa3.97□□□□□ -1.77
CCDC39-203ENST00000473854 SLC6A11P48066 632 aa3.97□□□□□ -1.77
CCDC39-203ENST00000473854 PTH1RQ03431 593 aa3.97□□□□□ -1.77
CCDC39-203ENST00000473854 APOBRQ0VD83 1088 aa3.97□□□□□ -1.77
CCDC39-203ENST00000473854 NRN1LQ496H8 165 aa3.97□□□□□ -1.77
CCDC39-203ENST00000473854 SEZ6Q53EL9 994 aa3.97□□□□□ -1.77
CCDC39-203ENST00000473854 DCAF15Q66K64 600 aa3.97□□□□□ -1.77
CCDC39-203ENST00000473854 ZG16BQ96DA0 208 aa3.97□□□□□ -1.77
CCDC39-203ENST00000473854 NAF1Q96HR8 494 aaKnown RBP3.97□□□□□ -1.77
CCDC39-203ENST00000473854 FBLN5Q9UBX5 448 aa3.97□□□□□ -1.77
CCDC39-203ENST00000473854 BACE2Q9Y5Z0 518 aa3.97□□□□□ -1.77
CCDC39-203ENST00000473854 B4GALT4O60513 344 aa3.96□□□□□ -1.78
CCDC39-203ENST00000473854 IL13P35225 146 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms