RNA–Protein interactions for RNA: ENST00000473667.5

PDZD11-203, Transcript of PDZ domain containing 11, humanhuman

TSL 4

Gene PDZD11, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-203ENST00000473667 COPS5Q92905 334 aa11.75□□□□□ -0.53
PDZD11-203ENST00000473667 NECAB3Q96P71 396 aaPredicted RBP11.75□□□□□ -0.53
PDZD11-203ENST00000473667 FTOQ9C0B1 505 aaKnown RBP eCLIP11.75□□□□□ -0.53
PDZD11-203ENST00000473667 ZBTB47Q9UFB7 747 aaPredicted RBP11.75□□□□□ -0.53
PDZD11-203ENST00000473667 RAPGEFL1Q9UHV5 662 aa11.75□□□□□ -0.53
PDZD11-203ENST00000473667 NOD1Q9Y239 953 aa11.75□□□□□ -0.53
PDZD11-203ENST00000473667 B4DLN1 442 aa11.74□□□□□ -0.53
PDZD11-203ENST00000473667 NEFLP07196 543 aa11.74□□□□□ -0.53
PDZD11-203ENST00000473667 KCNQ1P51787 676 aa11.74□□□□□ -0.53
PDZD11-203ENST00000473667 MRPL12P52815 198 aaKnown RBP11.74□□□□□ -0.53
PDZD11-203ENST00000473667 CHMP4BP1P59074 171 aa11.74□□□□□ -0.53
PDZD11-203ENST00000473667 ZNF543Q08ER8 600 aa11.74□□□□□ -0.53
PDZD11-203ENST00000473667 BFSP2Q13515 415 aa11.74□□□□□ -0.53
PDZD11-203ENST00000473667 MCMDC2Q4G0Z9 681 aa11.74□□□□□ -0.53
PDZD11-203ENST00000473667 ANKRD45Q5TZF3 282 aa11.74□□□□□ -0.53
PDZD11-203ENST00000473667 HERC6Q8IVU3 1022 aa11.74□□□□□ -0.53
PDZD11-203ENST00000473667 ARNTL2Q8WYA1 636 aa11.74□□□□□ -0.53
PDZD11-203ENST00000473667 FAM227BQ96M60 508 aa11.74□□□□□ -0.53
PDZD11-203ENST00000473667 TTC14Q96N46 770 aa11.74□□□□□ -0.53
PDZD11-203ENST00000473667 WDR19Q8NEZ3 1342 aa11.74□□□□□ -0.53
PDZD11-203ENST00000473667 A0A0D9SFI3 127 aa11.73□□□□□ -0.53
PDZD11-203ENST00000473667 EPOPA6NHQ4 379 aa11.73□□□□□ -0.53
PDZD11-203ENST00000473667 KIF28PB7ZC32 967 aa11.73□□□□□ -0.53
PDZD11-203ENST00000473667 BAIAP3O94812 1187 aa11.73□□□□□ -0.53
PDZD11-203ENST00000473667 ARHGEF15O94989 841 aa11.73□□□□□ -0.53
PDZD11-203ENST00000473667 ARIH2O95376 493 aa11.73□□□□□ -0.53
PDZD11-203ENST00000473667 SNHG28P0DPA3 235 aa11.73□□□□□ -0.53
PDZD11-203ENST00000473667 HSPD1P10809 573 aaKnown RBP11.73□□□□□ -0.53
PDZD11-203ENST00000473667 HAND2P61296 217 aa11.73□□□□□ -0.53
PDZD11-203ENST00000473667 MUC3AQ02505 3323 aa11.73□□□□□ -0.53
PDZD11-203ENST00000473667 TAP1Q03518 808 aa11.73□□□□□ -0.53
PDZD11-203ENST00000473667 USH1GQ495M9 461 aa11.73□□□□□ -0.53
PDZD11-203ENST00000473667 CHD9Q3L8U1 2897 aa11.73□□□□□ -0.53
PDZD11-203ENST00000473667 ZMYM6O95789 1325 aa11.72□□□□□ -0.53
PDZD11-203ENST00000473667 GOLGA8HP0CJ92 632 aa11.72□□□□□ -0.53
PDZD11-203ENST00000473667 PCP11498 1178 aaKnown RBP11.72□□□□□ -0.53
PDZD11-203ENST00000473667 PDE1AP54750 535 aa11.72□□□□□ -0.53
PDZD11-203ENST00000473667 PTGISQ16647 500 aa11.72□□□□□ -0.53
PDZD11-203ENST00000473667 GPATCH4Q5T3I0 446 aaKnown RBP11.72□□□□□ -0.53
PDZD11-203ENST00000473667 KRT40Q6A162 431 aa11.72□□□□□ -0.53
PDZD11-203ENST00000473667 MFSD6Q6ZSS7 791 aa11.72□□□□□ -0.53
PDZD11-203ENST00000473667 CCDC155Q8N6L0 562 aa11.72□□□□□ -0.53
PDZD11-203ENST00000473667 RGS22Q8NE09 1264 aa11.72□□□□□ -0.53
PDZD11-203ENST00000473667 C1QTNF1Q9BXJ1 281 aa11.72□□□□□ -0.53
PDZD11-203ENST00000473667 COG5Q9UP83 839 aa11.72□□□□□ -0.53
PDZD11-203ENST00000473667 TLL1O43897 1013 aa11.71□□□□□ -0.53
PDZD11-203ENST00000473667 MMP3P08254 477 aa11.71□□□□□ -0.53
PDZD11-203ENST00000473667 KCNJ6P48051 423 aa11.71□□□□□ -0.53
PDZD11-203ENST00000473667 NMIQ13287 307 aaPredicted RBP11.71□□□□□ -0.53
PDZD11-203ENST00000473667 GRB10Q13322 594 aa11.71□□□□□ -0.53
PDZD11-203ENST00000473667 LY6KQ17RY6 165 aa11.71□□□□□ -0.53
PDZD11-203ENST00000473667 GDF6Q6KF10 455 aaPredicted RBP11.71□□□□□ -0.53
PDZD11-203ENST00000473667 CCDC62Q6P9F0 684 aa11.71□□□□□ -0.53
PDZD11-203ENST00000473667 ZNF589Q86UQ0 364 aaPredicted RBP11.71□□□□□ -0.53
PDZD11-203ENST00000473667 SESTD1Q86VW0 696 aa11.71□□□□□ -0.53
PDZD11-203ENST00000473667 TICAM2Q86XR7 235 aa11.71□□□□□ -0.53
PDZD11-203ENST00000473667 TBC1D10CQ8IV04 446 aa11.71□□□□□ -0.53
PDZD11-203ENST00000473667 CAGE1Q8TC20 777 aa11.71□□□□□ -0.53
PDZD11-203ENST00000473667 AFAP1L1Q8TED9 768 aa11.71□□□□□ -0.53
PDZD11-203ENST00000473667 AFG1LQ8WV93 481 aa11.71□□□□□ -0.53
PDZD11-203ENST00000473667 CTAGE1Q96RT6 745 aa11.71□□□□□ -0.53
PDZD11-203ENST00000473667 ZKSCAN3Q9BRR0 538 aa11.71□□□□□ -0.53
PDZD11-203ENST00000473667 UBA5Q9GZZ9 404 aa11.71□□□□□ -0.53
PDZD11-203ENST00000473667 CPVLQ9H3G5 476 aa11.71□□□□□ -0.53
PDZD11-203ENST00000473667 RNF41Q9H4P4 317 aaPredicted RBP11.71□□□□□ -0.53
PDZD11-203ENST00000473667 TANC1Q9C0D5 1861 aa11.71□□□□□ -0.53
PDZD11-203ENST00000473667 SCN5AQ14524 2016 aa11.7□□□□□ -0.54
PDZD11-203ENST00000473667 ABCB11O95342 1321 aa11.7□□□□□ -0.54
PDZD11-203ENST00000473667 CCDC171Q6TFL3 1326 aa11.7□□□□□ -0.54
PDZD11-203ENST00000473667 GH1P01241 217 aa11.7□□□□□ -0.54
PDZD11-203ENST00000473667 CASTP20810 708 aaKnown RBP11.7□□□□□ -0.54
PDZD11-203ENST00000473667 PLA2G5P39877 138 aa11.7□□□□□ -0.54
PDZD11-203ENST00000473667 WDR5P61964 334 aaKnown RBP11.7□□□□□ -0.54
PDZD11-203ENST00000473667 ARHGAP1Q07960 439 aa11.7□□□□□ -0.54
PDZD11-203ENST00000473667 GPNMBQ14956 572 aa11.7□□□□□ -0.54
PDZD11-203ENST00000473667 CDC37Q16543 378 aaPredicted RBP11.7□□□□□ -0.54
PDZD11-203ENST00000473667 SEPT14Q6ZU15 432 aa11.7□□□□□ -0.54
PDZD11-203ENST00000473667 LRRC8DQ7L1W4 858 aa11.7□□□□□ -0.54
PDZD11-203ENST00000473667 DGKHQ86XP1 1220 aa11.7□□□□□ -0.54
PDZD11-203ENST00000473667 SYTL5Q8TDW5 730 aaPredicted RBP11.7□□□□□ -0.54
PDZD11-203ENST00000473667 NSUN6Q8TEA1 469 aaKnown RBP11.7□□□□□ -0.54
PDZD11-203ENST00000473667 TBC1D5Q92609 795 aa11.7□□□□□ -0.54
PDZD11-203ENST00000473667 ESR2Q92731 530 aa11.7□□□□□ -0.54
PDZD11-203ENST00000473667 HLA-CQ95604 372 aa11.7□□□□□ -0.54
PDZD11-203ENST00000473667 TAAR1Q96RJ0 339 aa11.7□□□□□ -0.54
PDZD11-203ENST00000473667 MAF1Q9H063 256 aa11.7□□□□□ -0.54
PDZD11-203ENST00000473667 NEDD4P46934 1319 aa11.69□□□□□ -0.54
PDZD11-203ENST00000473667 SCN10AQ9Y5Y9 1956 aa11.69□□□□□ -0.54
PDZD11-203ENST00000473667 LCHNA4D1U4 455 aa11.69□□□□□ -0.54
PDZD11-203ENST00000473667 TRIM6-TRIM34B2RNG4 842 aa11.69□□□□□ -0.54
PDZD11-203ENST00000473667 ZNF213O14771 459 aa11.69□□□□□ -0.54
PDZD11-203ENST00000473667 LPXNO60711 386 aa11.69□□□□□ -0.54
PDZD11-203ENST00000473667 PARNO95453 639 aaKnown RBP11.69□□□□□ -0.54
PDZD11-203ENST00000473667 SELPP16109 830 aa11.69□□□□□ -0.54
PDZD11-203ENST00000473667 RRP1P56182 461 aaKnown RBP11.69□□□□□ -0.54
PDZD11-203ENST00000473667 STXBP2Q15833 593 aa11.69□□□□□ -0.54
PDZD11-203ENST00000473667 CNKSR3Q6P9H4 555 aa11.69□□□□□ -0.54
PDZD11-203ENST00000473667 CHST3Q7LGC8 479 aa11.69□□□□□ -0.54
PDZD11-203ENST00000473667 SPRED2Q7Z698 418 aa11.69□□□□□ -0.54
PDZD11-203ENST00000473667 TMCO2Q7Z6W1 182 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms