RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 LRGUKQ96M69 825 aa6.99□□□□□ -1.29
RTF1-203ENST00000473214 NCOA5Q9HCD5 579 aaKnown RBP6.99□□□□□ -1.29
RTF1-203ENST00000473214 OSGEPQ9NPF4 335 aa6.99□□□□□ -1.29
RTF1-203ENST00000473214 BLOC1S4Q9NUP1 217 aa6.99□□□□□ -1.29
RTF1-203ENST00000473214 MRGBPQ9NV56 204 aa6.99□□□□□ -1.29
RTF1-203ENST00000473214 SNX5Q9Y5X3 404 aa6.99□□□□□ -1.29
RTF1-203ENST00000473214 GOLGA3Q08378 1498 aa6.98□□□□□ -1.29
RTF1-203ENST00000473214 RAPGEF6Q8TEU7 1601 aa6.98□□□□□ -1.29
RTF1-203ENST00000473214 ERC2O15083 957 aa6.98□□□□□ -1.29
RTF1-203ENST00000473214 BAIAP3O94812 1187 aa6.98□□□□□ -1.29
RTF1-203ENST00000473214 PF4P02776 101 aa6.98□□□□□ -1.29
RTF1-203ENST00000473214 TPM2P07951 284 aa6.98□□□□□ -1.29
RTF1-203ENST00000473214 RLBP1P12271 317 aa6.98□□□□□ -1.29
RTF1-203ENST00000473214 KCNA2P16389 499 aa6.98□□□□□ -1.29
RTF1-203ENST00000473214 YBX3P16989 372 aaKnown RBP eCLIP6.98□□□□□ -1.29
RTF1-203ENST00000473214 GARTP22102 1010 aa6.98□□□□□ -1.29
RTF1-203ENST00000473214 PSMA3P25788 255 aa6.98□□□□□ -1.29
RTF1-203ENST00000473214 MCM4P33991 863 aa6.98□□□□□ -1.29
RTF1-203ENST00000473214 KRT20P35900 424 aa6.98□□□□□ -1.29
RTF1-203ENST00000473214 CCNFP41002 786 aa6.98□□□□□ -1.29
RTF1-203ENST00000473214 PIP4K2BP78356 416 aa6.98□□□□□ -1.29
RTF1-203ENST00000473214 GPLD1P80108 840 aa6.98□□□□□ -1.29
RTF1-203ENST00000473214 GRM1Q13255 1194 aa6.98□□□□□ -1.29
RTF1-203ENST00000473214 PDCD2Q16342 344 aaPredicted RBP6.98□□□□□ -1.29
RTF1-203ENST00000473214 ABCB5Q2M3G0 1257 aa6.98□□□□□ -1.29
RTF1-203ENST00000473214 CCDC158Q5M9N0 1113 aa6.98□□□□□ -1.29
RTF1-203ENST00000473214 KIAA1614Q5VZ46 1190 aa6.98□□□□□ -1.29
RTF1-203ENST00000473214 SWSAP1Q6NVH7 229 aa6.98□□□□□ -1.29
RTF1-203ENST00000473214 ELMSAN1Q6PJG2 1045 aa6.98□□□□□ -1.29
RTF1-203ENST00000473214 C6orf15Q6UXA7 325 aaPredicted RBP6.98□□□□□ -1.29
RTF1-203ENST00000473214 ANKRD13BQ86YJ7 626 aa6.98□□□□□ -1.29
RTF1-203ENST00000473214 PPM1KQ8N3J5 372 aa6.98□□□□□ -1.29
RTF1-203ENST00000473214 ARL6IP6Q8N6S5 226 aa6.98□□□□□ -1.29
RTF1-203ENST00000473214 ZNF713Q8N859 430 aaPredicted RBP6.98□□□□□ -1.29
RTF1-203ENST00000473214 PRKRIP1Q9H875 184 aaPredicted RBP6.98□□□□□ -1.29
RTF1-203ENST00000473214 NPHS2Q9NP85 383 aa6.98□□□□□ -1.29
RTF1-203ENST00000473214 SMYD2Q9NRG4 433 aa6.98□□□□□ -1.29
RTF1-203ENST00000473214 RRN3Q9NYV6 651 aa6.98□□□□□ -1.29
RTF1-203ENST00000473214 FOXD3Q9UJU5 478 aaPredicted RBP6.98□□□□□ -1.29
RTF1-203ENST00000473214 C9orf84Q5VXU9 1444 aa6.98□□□□□ -1.29
RTF1-203ENST00000473214 SETD1AO15047 1707 aaKnown RBP6.98□□□□□ -1.29
RTF1-203ENST00000473214 ATP10AO60312 1499 aa6.98□□□□□ -1.29
RTF1-203ENST00000473214 DLL1O00548 723 aa6.97□□□□□ -1.29
RTF1-203ENST00000473214 TOR1BO14657 336 aa6.97□□□□□ -1.29
RTF1-203ENST00000473214 PLD2O14939 933 aa6.97□□□□□ -1.29
RTF1-203ENST00000473214 BRINP1O60477 761 aa6.97□□□□□ -1.29
RTF1-203ENST00000473214 SNUPNO95149 360 aaKnown RBP6.97□□□□□ -1.29
RTF1-203ENST00000473214 CAPN3P20807 821 aa6.97□□□□□ -1.29
RTF1-203ENST00000473214 CCND1P24385 295 aa6.97□□□□□ -1.29
RTF1-203ENST00000473214 TARSP26639 723 aaKnown RBP6.97□□□□□ -1.29
RTF1-203ENST00000473214 IDH3AP50213 366 aa6.97□□□□□ -1.29
RTF1-203ENST00000473214 ROR1Q01973 937 aa6.97□□□□□ -1.29
RTF1-203ENST00000473214 G3BP1Q13283 466 aaKnown RBP eCLIP6.97□□□□□ -1.29
RTF1-203ENST00000473214 GALEQ14376 348 aa6.97□□□□□ -1.29
RTF1-203ENST00000473214 LONRF2Q1L5Z9 754 aa6.97□□□□□ -1.29
RTF1-203ENST00000473214 ZC3H12AQ5D1E8 599 aaKnown RBP6.97□□□□□ -1.29
RTF1-203ENST00000473214 ZC3H12BQ5HYM0 836 aaKnown RBP6.97□□□□□ -1.29
RTF1-203ENST00000473214 KIAA0319Q5VV43 1072 aa6.97□□□□□ -1.29
RTF1-203ENST00000473214 FAAH2Q6GMR7 532 aa6.97□□□□□ -1.29
RTF1-203ENST00000473214 IQCEQ6IPM2 695 aa6.97□□□□□ -1.29
RTF1-203ENST00000473214 SLC51AQ86UW1 340 aa6.97□□□□□ -1.29
RTF1-203ENST00000473214 C11orf74Q86VG3 221 aa6.97□□□□□ -1.29
RTF1-203ENST00000473214 FAM178BQ8IXR5 827 aa6.97□□□□□ -1.29
RTF1-203ENST00000473214 DZIP1LQ8IYY4 767 aaKnown RBP6.97□□□□□ -1.29
RTF1-203ENST00000473214 ZBTB38Q8NAP3 1195 aaPredicted RBP6.97□□□□□ -1.29
RTF1-203ENST00000473214 PHC3Q8NDX5 983 aa6.97□□□□□ -1.29
RTF1-203ENST00000473214 IFT43Q96FT9 208 aa6.97□□□□□ -1.29
RTF1-203ENST00000473214 ANP32EQ9BTT0 268 aa6.97□□□□□ -1.29
RTF1-203ENST00000473214 ALG13Q9NP73 1137 aaKnown RBP6.97□□□□□ -1.29
RTF1-203ENST00000473214 PNMA8BQ9ULN7 279 aaPredicted RBP6.97□□□□□ -1.29
RTF1-203ENST00000473214 TPCN1Q9ULQ1 816 aa6.97□□□□□ -1.29
RTF1-203ENST00000473214 MAFFQ9ULX9 164 aa6.97□□□□□ -1.29
RTF1-203ENST00000473214 ITIH6Q6UXX5 1313 aa6.97□□□□□ -1.29
RTF1-203ENST00000473214 SCAPERQ9BY12 1400 aa6.96□□□□□ -1.3
RTF1-203ENST00000473214 hCG_1642624A0A1W2PR95 340 aa6.96□□□□□ -1.3
RTF1-203ENST00000473214 TLR3O15455 904 aaKnown RBP6.96□□□□□ -1.3
RTF1-203ENST00000473214 DDX3YO15523 660 aaKnown RBP6.96□□□□□ -1.3
RTF1-203ENST00000473214 ADCY3O60266 1144 aa6.96□□□□□ -1.3
RTF1-203ENST00000473214 GFPT2O94808 682 aa6.96□□□□□ -1.3
RTF1-203ENST00000473214 INMTO95050 263 aa6.96□□□□□ -1.3
RTF1-203ENST00000473214 IDEP14735 1019 aa6.96□□□□□ -1.3
RTF1-203ENST00000473214 SDSP20132 328 aa6.96□□□□□ -1.3
RTF1-203ENST00000473214 SSTR4P31391 388 aa6.96□□□□□ -1.3
RTF1-203ENST00000473214 L1CAMP32004 1257 aa6.96□□□□□ -1.3
RTF1-203ENST00000473214 CHKAP35790 457 aa6.96□□□□□ -1.3
RTF1-203ENST00000473214 RAD52P43351 418 aa6.96□□□□□ -1.3
RTF1-203ENST00000473214 DCTN1Q14203 1278 aa6.96□□□□□ -1.3
RTF1-203ENST00000473214 TUBB8Q3ZCM7 444 aa6.96□□□□□ -1.3
RTF1-203ENST00000473214 FNDC3BQ53EP0 1204 aaKnown RBP6.96□□□□□ -1.3
RTF1-203ENST00000473214 VPS53Q5VIR6 699 aa6.96□□□□□ -1.3
RTF1-203ENST00000473214 ZCCHC8Q6NZY4 707 aaKnown RBP6.96□□□□□ -1.3
RTF1-203ENST00000473214 ZNF449Q6P9G9 518 aa6.96□□□□□ -1.3
RTF1-203ENST00000473214 EPM2AIP1Q7L775 607 aaPredicted RBP6.96□□□□□ -1.3
RTF1-203ENST00000473214 KRT25Q7Z3Z0 450 aa6.96□□□□□ -1.3
RTF1-203ENST00000473214 TTC30AQ86WT1 665 aa6.96□□□□□ -1.3
RTF1-203ENST00000473214 BRSK2Q8IWQ3 736 aa6.96□□□□□ -1.3
RTF1-203ENST00000473214 AHI1Q8N157 1196 aa6.96□□□□□ -1.3
RTF1-203ENST00000473214 APPL2Q8NEU8 664 aa6.96□□□□□ -1.3
RTF1-203ENST00000473214 DDX1Q92499 740 aaKnown RBP6.96□□□□□ -1.3
RTF1-203ENST00000473214 ANP32BQ92688 251 aaKnown RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms