RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 TRIM49BA6NDI0 452 aa19.45■□□□□ 0.7
RRP1-202ENST00000471909 SPDYE2BA6NHP3 402 aa19.45■□□□□ 0.7
RRP1-202ENST00000471909 USP17L15C9J2P7 530 aa19.45■□□□□ 0.7
RRP1-202ENST00000471909 USP17L13C9JLJ4 530 aa19.45■□□□□ 0.7
RRP1-202ENST00000471909 USP17L11C9JVI0 530 aa19.45■□□□□ 0.7
RRP1-202ENST00000471909 USP17L18D6R9N7 530 aa19.45■□□□□ 0.7
RRP1-202ENST00000471909 USP17L22D6RA61 530 aa19.45■□□□□ 0.7
RRP1-202ENST00000471909 USP17L17D6RBQ6 530 aa19.45■□□□□ 0.7
RRP1-202ENST00000471909 USP17L19D6RCP7 530 aa19.45■□□□□ 0.7
RRP1-202ENST00000471909 USP17L20D6RJB6 530 aa19.45■□□□□ 0.7
RRP1-202ENST00000471909 NDUFB10O96000 172 aa19.45■□□□□ 0.7
RRP1-202ENST00000471909 SPDYE6P0CI01 402 aa19.45■□□□□ 0.7
RRP1-202ENST00000471909 KCNA3P22001 575 aa19.45■□□□□ 0.7
RRP1-202ENST00000471909 CCT6AP40227 531 aaKnown RBP19.45■□□□□ 0.7
RRP1-202ENST00000471909 PMS1P54277 932 aaKnown RBP19.45■□□□□ 0.7
RRP1-202ENST00000471909 GNG11P61952 73 aa19.45■□□□□ 0.7
RRP1-202ENST00000471909 USP17L24Q0WX57 530 aa19.45■□□□□ 0.7
RRP1-202ENST00000471909 SEMA3FQ13275 785 aa19.45■□□□□ 0.7
RRP1-202ENST00000471909 USP17L6PQ6QN14 398 aa19.45■□□□□ 0.7
RRP1-202ENST00000471909 RTKN2Q8IZC4 609 aa19.45■□□□□ 0.7
RRP1-202ENST00000471909 PSMD1Q99460 953 aa19.45■□□□□ 0.7
RRP1-202ENST00000471909 ZNF277Q9NRM2 450 aaPredicted RBP19.45■□□□□ 0.7
RRP1-202ENST00000471909 POTEMA6NI47 508 aa19.44■□□□□ 0.7
RRP1-202ENST00000471909 TCP10L2B9ZVM9 353 aa19.44■□□□□ 0.7
RRP1-202ENST00000471909 PSMD14O00487 310 aa19.44■□□□□ 0.7
RRP1-202ENST00000471909 PDIA5Q14554 519 aa19.44■□□□□ 0.7
RRP1-202ENST00000471909 TMEM266Q2M3C6 531 aa19.44■□□□□ 0.7
RRP1-202ENST00000471909 FILIP1LQ4L180 1135 aa19.44■□□□□ 0.7
RRP1-202ENST00000471909 GRIPAP1Q4V328 841 aa19.44■□□□□ 0.7
RRP1-202ENST00000471909 TCP11X2Q5H9J9 407 aa19.44■□□□□ 0.7
RRP1-202ENST00000471909 RBM26Q5T8P6 1007 aaKnown RBP19.44■□□□□ 0.7
RRP1-202ENST00000471909 GPR161Q8N6U8 529 aaKnown RBP19.44■□□□□ 0.7
RRP1-202ENST00000471909 PNMA5Q96PV4 448 aa19.44■□□□□ 0.7
RRP1-202ENST00000471909 GMLQ99445 158 aa19.44■□□□□ 0.7
RRP1-202ENST00000471909 DDX25Q9UHL0 483 aaKnown RBP19.44■□□□□ 0.7
RRP1-202ENST00000471909 COL2A1P02458 1487 aaPredicted RBP19.44■□□□□ 0.7
RRP1-202ENST00000471909 VIL1P09327 827 aaKnown RBP19.44■□□□□ 0.7
RRP1-202ENST00000471909 CC2D1AQ6P1N0 951 aaPredicted RBP19.44■□□□□ 0.7
RRP1-202ENST00000471909 LARGE2Q8N3Y3 721 aa19.44■□□□□ 0.7
RRP1-202ENST00000471909 HAS1Q92839 578 aa19.44■□□□□ 0.7
RRP1-202ENST00000471909 GMCL1Q96IK5 515 aa19.44■□□□□ 0.7
RRP1-202ENST00000471909 CLRN2A0PK11 232 aa19.43■□□□□ 0.7
RRP1-202ENST00000471909 KCNJ18B7U540 433 aa19.43■□□□□ 0.7
RRP1-202ENST00000471909 STX10O60499 249 aa19.43■□□□□ 0.7
RRP1-202ENST00000471909 TBC1D8O95759 1140 aa19.43■□□□□ 0.7
RRP1-202ENST00000471909 DPEP1P16444 411 aa19.43■□□□□ 0.7
RRP1-202ENST00000471909 KCNJ12Q14500 433 aa19.43■□□□□ 0.7
RRP1-202ENST00000471909 DEFB132Q7Z7B7 95 aa19.43■□□□□ 0.7
RRP1-202ENST00000471909 IRF2BP1Q8IU81 584 aa19.43■□□□□ 0.7
RRP1-202ENST00000471909 TXLNBQ8N3L3 684 aa19.43■□□□□ 0.7
RRP1-202ENST00000471909 BLOC1S4Q9NUP1 217 aa19.43■□□□□ 0.7
RRP1-202ENST00000471909 COL4A5P29400 1685 aa19.43■□□□□ 0.7
RRP1-202ENST00000471909 A0A1W2PRG0 241 aa19.43■□□□□ 0.7
RRP1-202ENST00000471909 H7C1D1 291 aa19.43■□□□□ 0.7
RRP1-202ENST00000471909 SNAP25P60880 206 aa19.43■□□□□ 0.7
RRP1-202ENST00000471909 MAP3K9P80192 1104 aa19.43■□□□□ 0.7
RRP1-202ENST00000471909 PPP2R3AQ06190 1150 aa19.43■□□□□ 0.7
RRP1-202ENST00000471909 SPAG1Q07617 926 aa19.43■□□□□ 0.7
RRP1-202ENST00000471909 WDR24Q96S15 920 aa19.43■□□□□ 0.7
RRP1-202ENST00000471909 NUDT12Q9BQG2 462 aa19.43■□□□□ 0.7
RRP1-202ENST00000471909 UBXN6Q9BZV1 441 aa19.43■□□□□ 0.7
RRP1-202ENST00000471909 EPC1Q9H2F5 836 aa19.43■□□□□ 0.7
RRP1-202ENST00000471909 ZBTB12Q9Y330 459 aaPredicted RBP19.43■□□□□ 0.7
RRP1-202ENST00000471909 TULP2O00295 520 aa19.42■□□□□ 0.7
RRP1-202ENST00000471909 OAS2P29728 719 aaKnown RBP19.42■□□□□ 0.7
RRP1-202ENST00000471909 COPB1P53618 953 aaKnown RBP19.42■□□□□ 0.7
RRP1-202ENST00000471909 ASIC1P78348 528 aa19.42■□□□□ 0.7
RRP1-202ENST00000471909 AMPD3Q01432 767 aa19.42■□□□□ 0.7
RRP1-202ENST00000471909 RBL2Q08999 1139 aa19.42■□□□□ 0.7
RRP1-202ENST00000471909 GJA10Q969M2 543 aa19.42■□□□□ 0.7
RRP1-202ENST00000471909 RAB34Q9BZG1 259 aa19.42■□□□□ 0.7
RRP1-202ENST00000471909 AKR1B15C9JRZ8 316 aaPredicted RBP19.42■□□□□ 0.7
RRP1-202ENST00000471909 N4BP3O15049 544 aa19.42■□□□□ 0.7
RRP1-202ENST00000471909 SASH3O75995 380 aa19.42■□□□□ 0.7
RRP1-202ENST00000471909 PDE4DQ08499 809 aa19.42■□□□□ 0.7
RRP1-202ENST00000471909 STIM1Q13586 685 aa19.42■□□□□ 0.7
RRP1-202ENST00000471909 NEK11Q8NG66 645 aa19.42■□□□□ 0.7
RRP1-202ENST00000471909 GLT8D2Q9H1C3 349 aa19.42■□□□□ 0.7
RRP1-202ENST00000471909 VPS16Q9H269 839 aa19.42■□□□□ 0.7
RRP1-202ENST00000471909 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.42■□□□□ 0.71e-6■■■■■ 31.8
RRP1-202ENST00000471909 TAB2Q9NYJ8 693 aa19.42■□□□□ 0.7
RRP1-202ENST00000471909 TMOD2Q9NZR1 351 aa19.42■□□□□ 0.7
RRP1-202ENST00000471909 MRFAP1Q9Y605 127 aa19.42■□□□□ 0.7
RRP1-202ENST00000471909 PSMA7O14818 248 aa19.41■□□□□ 0.7
RRP1-202ENST00000471909 GCFC2P16383 781 aaKnown RBP19.41■□□□□ 0.7
RRP1-202ENST00000471909 STK4Q13043 487 aa19.41■□□□□ 0.7
RRP1-202ENST00000471909 GPS2Q13227 327 aa19.41■□□□□ 0.7
RRP1-202ENST00000471909 ARFGAP3Q9NP61 516 aa19.41■□□□□ 0.7
RRP1-202ENST00000471909 EXOC1Q9NV70 894 aa19.41■□□□□ 0.7
RRP1-202ENST00000471909 ZNF70Q9UC06 446 aaPredicted RBP19.41■□□□□ 0.7
RRP1-202ENST00000471909 STK17AQ9UEE5 414 aa19.41■□□□□ 0.7
RRP1-202ENST00000471909 HERC5Q9UII4 1024 aaKnown RBP19.41■□□□□ 0.7
RRP1-202ENST00000471909 MEIS2O14770 477 aa19.41■□□□□ 0.7
RRP1-202ENST00000471909 MCM6Q14566 821 aa19.41■□□□□ 0.7
RRP1-202ENST00000471909 SMC1AQ14683 1233 aaKnown RBP19.41■□□□□ 0.7
RRP1-202ENST00000471909 DLGAP5Q15398 846 aa19.41■□□□□ 0.7
RRP1-202ENST00000471909 TTI2Q6NXR4 508 aa19.41■□□□□ 0.7
RRP1-202ENST00000471909 SV2BQ7L1I2 683 aa19.41■□□□□ 0.7
RRP1-202ENST00000471909 PPFIBP1Q86W92 1011 aa19.41■□□□□ 0.7
RRP1-202ENST00000471909 SNX29Q8TEQ0 813 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms