RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 VTA1Q9NP79 307 aa17.39■□□□□ 0.37
SNX13-205ENST00000471744 SH2B1Q9NRF2 756 aaPredicted RBP17.39■□□□□ 0.37
SNX13-205ENST00000471744 ASTN1O14525 1302 aa17.39■□□□□ 0.37
SNX13-205ENST00000471744 LRRC37A2A6NM11 1700 aa17.38■□□□□ 0.37
SNX13-205ENST00000471744 STXBP3O00186 592 aa17.38■□□□□ 0.37
SNX13-205ENST00000471744 SGPL1O95470 568 aa17.38■□□□□ 0.37
SNX13-205ENST00000471744 AKR1A1P14550 325 aa17.38■□□□□ 0.37
SNX13-205ENST00000471744 EDNRBP24530 442 aa17.38■□□□□ 0.37
SNX13-205ENST00000471744 MCM2P49736 904 aa17.38■□□□□ 0.37
SNX13-205ENST00000471744 PDE4DQ08499 809 aa17.38■□□□□ 0.37
SNX13-205ENST00000471744 ACVR2BQ13705 512 aa17.38■□□□□ 0.37
SNX13-205ENST00000471744 ARHGEF16Q5VV41 709 aa17.38■□□□□ 0.37
SNX13-205ENST00000471744 TRPV1Q8NER1 839 aa17.38■□□□□ 0.37
SNX13-205ENST00000471744 CCDC148Q8NFR7 591 aa17.38■□□□□ 0.37
SNX13-205ENST00000471744 U2AF1L4Q8WU68 220 aaKnown RBP17.38■□□□□ 0.37
SNX13-205ENST00000471744 DEFB118Q96PH6 123 aa17.38■□□□□ 0.37
SNX13-205ENST00000471744 TAAR1Q96RJ0 339 aa17.38■□□□□ 0.37
SNX13-205ENST00000471744 SH3GLB2Q9NR46 395 aa17.38■□□□□ 0.37
SNX13-205ENST00000471744 DDX20Q9UHI6 824 aaKnown RBP17.38■□□□□ 0.37
SNX13-205ENST00000471744 KIAA1217Q5T5P2 1943 aa17.38■□□□□ 0.37
SNX13-205ENST00000471744 STK36Q9NRP7 1315 aa17.38■□□□□ 0.37
SNX13-205ENST00000471744 ESYT2A0FGR8 921 aa17.37■□□□□ 0.37
SNX13-205ENST00000471744 ZNF865P0CJ78 1059 aaPredicted RBP17.37■□□□□ 0.37
SNX13-205ENST00000471744 HOXA13P31271 388 aaPredicted RBP17.37■□□□□ 0.37
SNX13-205ENST00000471744 ADCY7P51828 1080 aa17.37■□□□□ 0.37
SNX13-205ENST00000471744 PKN1Q16512 942 aa17.37■□□□□ 0.37
SNX13-205ENST00000471744 PRAMEF19Q5SWL8 479 aa17.37■□□□□ 0.37
SNX13-205ENST00000471744 PURBQ96QR8 312 aaKnown RBP17.37■□□□□ 0.37
SNX13-205ENST00000471744 RIC8AQ9NPQ8 531 aa17.37■□□□□ 0.37
SNX13-205ENST00000471744 PXMP2Q9NR77 195 aa17.37■□□□□ 0.37
SNX13-205ENST00000471744 COL20A1Q9P218 1284 aa17.37■□□□□ 0.37
SNX13-205ENST00000471744 ZHX1Q9UKY1 873 aaPredicted RBP17.37■□□□□ 0.37
SNX13-205ENST00000471744 FAM184BQ9ULE4 1060 aa17.37■□□□□ 0.37
SNX13-205ENST00000471744 MEIS2O14770 477 aa17.36■□□□□ 0.37
SNX13-205ENST00000471744 GNA11P29992 359 aa17.36■□□□□ 0.37
SNX13-205ENST00000471744 SOX10P56693 466 aa17.36■□□□□ 0.37
SNX13-205ENST00000471744 STXBP2Q15833 593 aa17.36■□□□□ 0.37
SNX13-205ENST00000471744 MCTP2Q6DN12 878 aa17.36■□□□□ 0.37
SNX13-205ENST00000471744 FCHSD1Q86WN1 690 aa17.36■□□□□ 0.37
SNX13-205ENST00000471744 WASF1Q92558 559 aa17.36■□□□□ 0.37
SNX13-205ENST00000471744 CRISPLD2Q9H0B8 497 aa17.36■□□□□ 0.37
SNX13-205ENST00000471744 EHMT1Q9H9B1 1298 aa17.36■□□□□ 0.37
SNX13-205ENST00000471744 POTEFA5A3E0 1075 aa17.35■□□□□ 0.37
SNX13-205ENST00000471744 SMCO2A6NFE2 343 aa17.35■□□□□ 0.37
SNX13-205ENST00000471744 SPDYE3A6NKU9 549 aa17.35■□□□□ 0.37
SNX13-205ENST00000471744 LARGE1O95461 756 aa17.35■□□□□ 0.37
SNX13-205ENST00000471744 FOSP01100 380 aaPredicted RBP17.35■□□□□ 0.37
SNX13-205ENST00000471744 TFRCP02786 760 aaKnown RBP17.35■□□□□ 0.37
SNX13-205ENST00000471744 NR3C2P08235 984 aa17.35■□□□□ 0.37
SNX13-205ENST00000471744 RARBP10826 455 aa17.35■□□□□ 0.37
SNX13-205ENST00000471744 XBP1P17861 261 aa17.35■□□□□ 0.37
SNX13-205ENST00000471744 EIF2AK2P19525 551 aaKnown RBP17.35■□□□□ 0.37
SNX13-205ENST00000471744 USP17L6PQ6QN14 398 aa17.35■□□□□ 0.37
SNX13-205ENST00000471744 ANKLE1Q8NAG6 615 aa17.35■□□□□ 0.37
SNX13-205ENST00000471744 BICD2Q8TD16 824 aa17.35■□□□□ 0.37
SNX13-205ENST00000471744 PDCD2LQ9BRP1 358 aa17.35■□□□□ 0.37
SNX13-205ENST00000471744 KATNBL1Q9H079 304 aa17.35■□□□□ 0.37
SNX13-205ENST00000471744 ZMYND12Q9H0C1 365 aa17.35■□□□□ 0.37
SNX13-205ENST00000471744 C6orf50Q9HD87 102 aa17.35■□□□□ 0.37
SNX13-205ENST00000471744 OGDHLQ9ULD0 1010 aa17.35■□□□□ 0.37
SNX13-205ENST00000471744 FRMPD4Q14CM0 1322 aa17.35■□□□□ 0.37
SNX13-205ENST00000471744 STAM2O75886 525 aa17.34■□□□□ 0.37
SNX13-205ENST00000471744 AP3B2Q13367 1082 aa17.34■□□□□ 0.37
SNX13-205ENST00000471744 CCDC144BQ3MJ40 725 aa17.34■□□□□ 0.37
SNX13-205ENST00000471744 LHX8Q68G74 356 aa17.34■□□□□ 0.37
SNX13-205ENST00000471744 IQSEC1Q6DN90 963 aa17.34■□□□□ 0.37
SNX13-205ENST00000471744 TYW1BQ6NUM6 668 aa17.34■□□□□ 0.37
SNX13-205ENST00000471744 XRRA1Q6P2D8 792 aa17.34■□□□□ 0.37
SNX13-205ENST00000471744 NECAB1Q8N987 351 aa17.34■□□□□ 0.37
SNX13-205ENST00000471744 LLPHQ9BRT6 129 aaKnown RBP17.34■□□□□ 0.37
SNX13-205ENST00000471744 DUSP11O75319 330 aaKnown RBP17.33■□□□□ 0.36
SNX13-205ENST00000471744 EIF3JO75822 258 aaKnown RBP17.33■□□□□ 0.36
SNX13-205ENST00000471744 CCND2P30279 289 aa17.33■□□□□ 0.36
SNX13-205ENST00000471744 PGM5Q15124 567 aa17.33■□□□□ 0.36
SNX13-205ENST00000471744 GALNT17Q6IS24 598 aa17.33■□□□□ 0.36
SNX13-205ENST00000471744 FBXO16Q8IX29 292 aaPredicted RBP17.33■□□□□ 0.36
SNX13-205ENST00000471744 ARRDC4Q8NCT1 418 aa17.33■□□□□ 0.36
SNX13-205ENST00000471744 SCFD2Q8WU76 684 aa17.33■□□□□ 0.36
SNX13-205ENST00000471744 ORC3Q9UBD5 711 aaPredicted RBP17.33■□□□□ 0.36
SNX13-205ENST00000471744 CENPFP49454 3210 aa17.33■□□□□ 0.36
SNX13-205ENST00000471744 RBM47A0AV96 593 aaKnown RBP17.32■□□□□ 0.36
SNX13-205ENST00000471744 NKRFO15226 690 aaKnown RBP eCLIP17.32■□□□□ 0.36
SNX13-205ENST00000471744 PPFIA3O75145 1194 aa17.32■□□□□ 0.36
SNX13-205ENST00000471744 CAPN15O75808 1086 aa17.32■□□□□ 0.36
SNX13-205ENST00000471744 CTDNEP1O95476 244 aa17.32■□□□□ 0.36
SNX13-205ENST00000471744 EN2P19622 333 aaPredicted RBP17.32■□□□□ 0.36
SNX13-205ENST00000471744 TNFAIP2Q03169 654 aa17.32■□□□□ 0.36
SNX13-205ENST00000471744 TAPT1Q6NXT6 567 aa17.32■□□□□ 0.36
SNX13-205ENST00000471744 EEPD1Q7L9B9 569 aa17.32■□□□□ 0.36
SNX13-205ENST00000471744 VSIG10LQ86VR7 867 aa17.32■□□□□ 0.36
SNX13-205ENST00000471744 NSUN7Q8NE18 718 aaKnown RBP17.32■□□□□ 0.36
SNX13-205ENST00000471744 SHISA4Q96DD7 197 aa17.32■□□□□ 0.36
SNX13-205ENST00000471744 SPC25Q9HBM1 224 aa17.32■□□□□ 0.36
SNX13-205ENST00000471744 VPS54Q9P1Q0 977 aa17.32■□□□□ 0.36
SNX13-205ENST00000471744 Q9Y3F1 56 aa17.32■□□□□ 0.36
SNX13-205ENST00000471744 NLRP5P59047 1200 aa17.31■□□□□ 0.36
SNX13-205ENST00000471744 HMGN5P82970 282 aaKnown RBP17.31■□□□□ 0.36
SNX13-205ENST00000471744 TTLL4Q14679 1199 aa17.31■□□□□ 0.36
SNX13-205ENST00000471744 UBE2SQ16763 222 aa17.31■□□□□ 0.36
SNX13-205ENST00000471744 PCNX4Q63HM2 1172 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms