RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 ARHGAP4P98171 946 aa21.88■■□□□ 1.09
PSPC1-203ENST00000471658 NEK8Q86SG6 692 aa21.88■■□□□ 1.09
PSPC1-203ENST00000471658 CRYGNQ8WXF5 182 aa21.88■■□□□ 1.09
PSPC1-203ENST00000471658 ARHGAP39Q9C0H5 1083 aa21.88■■□□□ 1.09
PSPC1-203ENST00000471658 PXMP2Q9NR77 195 aa21.88■■□□□ 1.09
PSPC1-203ENST00000471658 NOL7Q9UMY1 257 aaKnown RBP21.88■■□□□ 1.09
PSPC1-203ENST00000471658 CNPY2Q9Y2B0 182 aa21.88■■□□□ 1.09
PSPC1-203ENST00000471658 ATP6V1DQ9Y5K8 247 aa21.88■■□□□ 1.09
PSPC1-203ENST00000471658 RPTORQ8N122 1335 aa21.88■■□□□ 1.09
PSPC1-203ENST00000471658 DNAJC25-GNG10A0A024R161 153 aa21.88■■□□□ 1.09
PSPC1-203ENST00000471658 COBLO75128 1261 aa21.88■■□□□ 1.09
PSPC1-203ENST00000471658 BAG4O95429 457 aaKnown RBP21.88■■□□□ 1.09
PSPC1-203ENST00000471658 NCLP19338 710 aaKnown RBP21.88■■□□□ 1.09
PSPC1-203ENST00000471658 ADORA2AP29274 412 aa21.88■■□□□ 1.09
PSPC1-203ENST00000471658 CAP1Q01518 475 aa21.88■■□□□ 1.09
PSPC1-203ENST00000471658 RILPL1Q5EBL4 403 aa21.88■■□□□ 1.09
PSPC1-203ENST00000471658 TTC38Q5R3I4 469 aa21.88■■□□□ 1.09
PSPC1-203ENST00000471658 FAM133AQ8N9E0 248 aa21.88■■□□□ 1.09
PSPC1-203ENST00000471658 IVNS1ABPQ9Y6Y0 642 aa21.88■■□□□ 1.09
PSPC1-203ENST00000471658 ARHGEF16Q5VV41 709 aa21.87■■□□□ 1.09
PSPC1-203ENST00000471658 FGD4Q96M96 766 aa21.87■■□□□ 1.09
PSPC1-203ENST00000471658 ZNF396Q96N95 335 aaPredicted RBP21.87■■□□□ 1.09
PSPC1-203ENST00000471658 PDCD2LQ9BRP1 358 aa21.87■■□□□ 1.09
PSPC1-203ENST00000471658 MAF1Q9H063 256 aa21.87■■□□□ 1.09
PSPC1-203ENST00000471658 GDPD2Q9HCC8 539 aa21.87■■□□□ 1.09
PSPC1-203ENST00000471658 TSKSQ9UJT2 592 aa21.87■■□□□ 1.09
PSPC1-203ENST00000471658 LCTP09848 1927 aa21.86■■□□□ 1.09
PSPC1-203ENST00000471658 STRNO43815 780 aa21.86■■□□□ 1.09
PSPC1-203ENST00000471658 TDP2O95551 362 aa21.86■■□□□ 1.09
PSPC1-203ENST00000471658 GRB14Q14449 540 aa21.86■■□□□ 1.09
PSPC1-203ENST00000471658 PGM5Q15124 567 aa21.86■■□□□ 1.09
PSPC1-203ENST00000471658 SF3A1Q15459 793 aaKnown RBP21.86■■□□□ 1.09
PSPC1-203ENST00000471658 FRMPD4Q14CM0 1322 aa21.86■■□□□ 1.09
PSPC1-203ENST00000471658 CCNT1O60563 726 aaKnown RBP21.85■■□□□ 1.09
PSPC1-203ENST00000471658 MCM7P33993 719 aa21.85■■□□□ 1.09
PSPC1-203ENST00000471658 TRAPPC10P48553 1259 aa21.85■■□□□ 1.09
PSPC1-203ENST00000471658 LACTBP83111 547 aaPredicted RBP21.85■■□□□ 1.09
PSPC1-203ENST00000471658 SP3Q02447 781 aa21.85■■□□□ 1.09
PSPC1-203ENST00000471658 ANO1Q5XXA6 986 aa21.85■■□□□ 1.09
PSPC1-203ENST00000471658 ABRAQ8N0Z2 381 aa21.85■■□□□ 1.09
PSPC1-203ENST00000471658 NSUN6Q8TEA1 469 aaKnown RBP21.85■■□□□ 1.09
PSPC1-203ENST00000471658 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.85■■□□□ 1.09
PSPC1-203ENST00000471658 MRVI1Q9Y6F6 885 aa21.85■■□□□ 1.09
PSPC1-203ENST00000471658 MYH7BA7E2Y1 1941 aa21.85■■□□□ 1.09
PSPC1-203ENST00000471658 PLXNB2O15031 1838 aa21.84■■□□□ 1.09
PSPC1-203ENST00000471658 SLC15A5A6NIM6 579 aa21.84■■□□□ 1.09
PSPC1-203ENST00000471658 MYCLP12524 364 aaPredicted RBP21.84■■□□□ 1.09
PSPC1-203ENST00000471658 PSMC4P43686 418 aa21.84■■□□□ 1.09
PSPC1-203ENST00000471658 ALDH5A1P51649 535 aaPredicted RBP21.84■■□□□ 1.09
PSPC1-203ENST00000471658 USP11P51784 963 aa21.84■■□□□ 1.09
PSPC1-203ENST00000471658 ZNF792Q3KQV3 632 aa21.84■■□□□ 1.09
PSPC1-203ENST00000471658 CYP2W1Q8TAV3 490 aa21.84■■□□□ 1.09
PSPC1-203ENST00000471658 TRIM47Q96LD4 638 aa21.84■■□□□ 1.09
PSPC1-203ENST00000471658 EHMT1Q9H9B1 1298 aa21.84■■□□□ 1.09
PSPC1-203ENST00000471658 MYH15Q9Y2K3 1946 aa21.84■■□□□ 1.09
PSPC1-203ENST00000471658 CEP350Q5VT06 3117 aa21.84■■□□□ 1.09
PSPC1-203ENST00000471658 ZSWIM8A7E2V4 1837 aa21.84■■□□□ 1.09
PSPC1-203ENST00000471658 ZNFX1Q9P2E3 1918 aaKnown RBP21.84■■□□□ 1.09
PSPC1-203ENST00000471658 GPR25O00155 361 aa21.84■■□□□ 1.09
PSPC1-203ENST00000471658 TNPO2O14787 897 aaKnown RBP21.84■■□□□ 1.09
PSPC1-203ENST00000471658 NR3C2P08235 984 aa21.84■■□□□ 1.09
PSPC1-203ENST00000471658 CYP3A4P08684 503 aa21.84■■□□□ 1.09
PSPC1-203ENST00000471658 KRT85P78386 507 aa21.84■■□□□ 1.09
PSPC1-203ENST00000471658 MRPS9P82933 396 aaKnown RBP21.84■■□□□ 1.09
PSPC1-203ENST00000471658 MAP2K1Q02750 393 aaPredicted RBP21.84■■□□□ 1.09
PSPC1-203ENST00000471658 MORN1Q5T089 497 aa21.84■■□□□ 1.09
PSPC1-203ENST00000471658 UIMC1Q96RL1 719 aa21.84■■□□□ 1.09
PSPC1-203ENST00000471658 RTEL1Q9NZ71 1219 aa21.84■■□□□ 1.09
PSPC1-203ENST00000471658 FAM86B1E9PN63 330 aa21.83■■□□□ 1.08
PSPC1-203ENST00000471658 FIBPO43427 364 aa21.83■■□□□ 1.08
PSPC1-203ENST00000471658 SLC37A4O43826 429 aa21.83■■□□□ 1.08
PSPC1-203ENST00000471658 FAM86B2P0C5J1 330 aa21.83■■□□□ 1.08
PSPC1-203ENST00000471658 PTPAQ15257 358 aa21.83■■□□□ 1.08
PSPC1-203ENST00000471658 DNERQ8NFT8 737 aa21.83■■□□□ 1.08
PSPC1-203ENST00000471658 NPLOC4Q8TAT6 608 aa21.83■■□□□ 1.08
PSPC1-203ENST00000471658 TMEM60Q9H2L4 133 aa21.83■■□□□ 1.08
PSPC1-203ENST00000471658 SAGE1Q9NXZ1 904 aa21.83■■□□□ 1.08
PSPC1-203ENST00000471658 GJD2Q9UKL4 321 aa21.83■■□□□ 1.08
PSPC1-203ENST00000471658 ZNF76P36508 570 aa21.82■■□□□ 1.08
PSPC1-203ENST00000471658 NASPP49321 788 aaPredicted RBP21.82■■□□□ 1.08
PSPC1-203ENST00000471658 PCNX4Q63HM2 1172 aa21.82■■□□□ 1.08
PSPC1-203ENST00000471658 CLEC17AQ6ZS10 378 aa21.82■■□□□ 1.08
PSPC1-203ENST00000471658 DPP9Q86TI2 863 aa21.82■■□□□ 1.08
PSPC1-203ENST00000471658 VSIG10LQ86VR7 867 aa21.82■■□□□ 1.08
PSPC1-203ENST00000471658 C4orf32Q8N8J7 132 aa21.82■■□□□ 1.08
PSPC1-203ENST00000471658 CD99L2Q8TCZ2 262 aa21.82■■□□□ 1.08
PSPC1-203ENST00000471658 POLR3EQ9NVU0 708 aa21.82■■□□□ 1.08
PSPC1-203ENST00000471658 WBP1LQ9NX94 342 aa21.82■■□□□ 1.08
PSPC1-203ENST00000471658 CFAP45Q9UL16 551 aa21.82■■□□□ 1.08
PSPC1-203ENST00000471658 TCHHQ07283 1943 aa21.82■■□□□ 1.08
PSPC1-203ENST00000471658 CIITAP33076 1130 aa21.81■■□□□ 1.08
PSPC1-203ENST00000471658 FCGRTP55899 365 aa21.81■■□□□ 1.08
PSPC1-203ENST00000471658 MAP2K5Q13163 448 aa21.81■■□□□ 1.08
PSPC1-203ENST00000471658 ATL3Q6DD88 541 aa21.81■■□□□ 1.08
PSPC1-203ENST00000471658 PPP4R3AQ6IN85 833 aa21.81■■□□□ 1.08
PSPC1-203ENST00000471658 LINC00301Q8NCQ3 95 aa21.81■■□□□ 1.08
PSPC1-203ENST00000471658 LEO1Q8WVC0 666 aaPredicted RBP21.81■■□□□ 1.08
PSPC1-203ENST00000471658 USP6NLQ92738 828 aa21.81■■□□□ 1.08
PSPC1-203ENST00000471658 ADD3Q9UEY8 706 aaKnown RBP21.81■■□□□ 1.08
PSPC1-203ENST00000471658 DOCK3Q8IZD9 2030 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms