RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 INO80Q9ULG1 1556 aaPredicted RBP7.77□□□□□ -1.17
CKS1B-204ENST00000471245 SHANK2Q9UPX8 1470 aa7.77□□□□□ -1.17
CKS1B-204ENST00000471245 SHISA3A0PJX4 238 aa7.77□□□□□ -1.17
CKS1B-204ENST00000471245 PRR33A8MZF0 331 aa7.77□□□□□ -1.17
CKS1B-204ENST00000471245 TOM1O60784 492 aa7.77□□□□□ -1.17
CKS1B-204ENST00000471245 COBLO75128 1261 aa7.77□□□□□ -1.17
CKS1B-204ENST00000471245 CTSKP43235 329 aa7.77□□□□□ -1.17
CKS1B-204ENST00000471245 KCNJ6P48051 423 aa7.77□□□□□ -1.17
CKS1B-204ENST00000471245 SF1Q15637 639 aaKnown RBP7.77□□□□□ -1.17
CKS1B-204ENST00000471245 ZNF765Q7L2R6 523 aa7.77□□□□□ -1.17
CKS1B-204ENST00000471245 COPS5Q92905 334 aa7.77□□□□□ -1.17
CKS1B-204ENST00000471245 SLC52A2Q9HAB3 445 aa7.77□□□□□ -1.17
CKS1B-204ENST00000471245 METTL14Q9HCE5 456 aaKnown RBP7.77□□□□□ -1.17
CKS1B-204ENST00000471245 NDOR1Q9UHB4 597 aa7.77□□□□□ -1.17
CKS1B-204ENST00000471245 ADGBQ8N7X0 1667 aa7.76□□□□□ -1.17
CKS1B-204ENST00000471245 A2ML1A8K2U0 1454 aa7.76□□□□□ -1.17
CKS1B-204ENST00000471245 DNAJC8O75937 253 aaPredicted RBP7.76□□□□□ -1.17
CKS1B-204ENST00000471245 SDSP20132 328 aa7.76□□□□□ -1.17
CKS1B-204ENST00000471245 CNGA1P29973 690 aa7.76□□□□□ -1.17
CKS1B-204ENST00000471245 BMP8BP34820 402 aa7.76□□□□□ -1.17
CKS1B-204ENST00000471245 CYP4F3Q08477 520 aa7.76□□□□□ -1.17
CKS1B-204ENST00000471245 TESK1Q15569 626 aa7.76□□□□□ -1.17
CKS1B-204ENST00000471245 NTRK3Q16288 839 aa7.76□□□□□ -1.17
CKS1B-204ENST00000471245 CLEC16AQ2KHT3 1053 aa7.76□□□□□ -1.17
CKS1B-204ENST00000471245 ACBD5Q5T8D3 534 aaPredicted RBP7.76□□□□□ -1.17
CKS1B-204ENST00000471245 CRTC3Q6UUV7 619 aa7.76□□□□□ -1.17
CKS1B-204ENST00000471245 BRAPQ7Z569 592 aa7.76□□□□□ -1.17
CKS1B-204ENST00000471245 LRRTM3Q86VH5 581 aa7.76□□□□□ -1.17
CKS1B-204ENST00000471245 PPM1KQ8N3J5 372 aa7.76□□□□□ -1.17
CKS1B-204ENST00000471245 SLC7A14Q8TBB6 771 aa7.76□□□□□ -1.17
CKS1B-204ENST00000471245 TARS2Q9BW92 718 aaKnown RBP7.76□□□□□ -1.17
CKS1B-204ENST00000471245 TRIT1Q9H3H1 467 aaKnown RBP7.76□□□□□ -1.17
CKS1B-204ENST00000471245 ST14Q9Y5Y6 855 aa7.76□□□□□ -1.17
CKS1B-204ENST00000471245 ATP7AQ04656 1500 aa7.76□□□□□ -1.17
CKS1B-204ENST00000471245 SYCP2Q9BX26 1530 aa7.76□□□□□ -1.17
CKS1B-204ENST00000471245 EEA1Q15075 1411 aa7.76□□□□□ -1.17
CKS1B-204ENST00000471245 ARHGAP35Q9NRY4 1499 aa7.75□□□□□ -1.17
CKS1B-204ENST00000471245 AURKAO14965 403 aa7.75□□□□□ -1.17
CKS1B-204ENST00000471245 CYP26A1O43174 497 aa7.75□□□□□ -1.17
CKS1B-204ENST00000471245 VAMP4O75379 141 aa7.75□□□□□ -1.17
CKS1B-204ENST00000471245 POU3F2P20265 443 aaPredicted RBP7.75□□□□□ -1.17
CKS1B-204ENST00000471245 SCRN1Q12765 414 aa7.75□□□□□ -1.17
CKS1B-204ENST00000471245 STYK1Q6J9G0 422 aa7.75□□□□□ -1.17
CKS1B-204ENST00000471245 DCAF4Q8WV16 495 aa7.75□□□□□ -1.17
CKS1B-204ENST00000471245 GPATCH2Q9NW75 528 aa7.75□□□□□ -1.17
CKS1B-204ENST00000471245 DDX56Q9NY93 547 aaKnown RBP7.75□□□□□ -1.17
CKS1B-204ENST00000471245 MINPP1Q9UNW1 487 aa7.75□□□□□ -1.17
CKS1B-204ENST00000471245 BACE2Q9Y5Z0 518 aa7.75□□□□□ -1.17
CKS1B-204ENST00000471245 RNF17Q9BXT8 1623 aaKnown RBP7.74□□□□□ -1.17
CKS1B-204ENST00000471245 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.74□□□□□ -1.17
CKS1B-204ENST00000471245 FAM155AB1AL88 458 aaPredicted RBP7.74□□□□□ -1.17
CKS1B-204ENST00000471245 TGFB1P01137 390 aa7.74□□□□□ -1.17
CKS1B-204ENST00000471245 ASLP04424 464 aa7.74□□□□□ -1.17
CKS1B-204ENST00000471245 CD3EP07766 207 aa7.74□□□□□ -1.17
CKS1B-204ENST00000471245 NAT1P18440 290 aa7.74□□□□□ -1.17
CKS1B-204ENST00000471245 POU3F3P20264 500 aaPredicted RBP7.74□□□□□ -1.17
CKS1B-204ENST00000471245 ECI1P42126 302 aa7.74□□□□□ -1.17
CKS1B-204ENST00000471245 NOP2P46087 812 aaKnown RBP7.74□□□□□ -1.17
CKS1B-204ENST00000471245 CD97P48960 835 aa7.74□□□□□ -1.17
CKS1B-204ENST00000471245 PRSS53Q2L4Q9 553 aa7.74□□□□□ -1.17
CKS1B-204ENST00000471245 DPY19L1Q2PZI1 675 aa7.74□□□□□ -1.17
CKS1B-204ENST00000471245 CT47A1Q5JQC4 288 aaPredicted RBP7.74□□□□□ -1.17
CKS1B-204ENST00000471245 KREMEN2Q8NCW0 462 aa7.74□□□□□ -1.17
CKS1B-204ENST00000471245 DDX1Q92499 740 aaKnown RBP7.74□□□□□ -1.17
CKS1B-204ENST00000471245 ZFYVE21Q9BQ24 234 aa7.74□□□□□ -1.17
CKS1B-204ENST00000471245 KRTAP4-12Q9BQ66 201 aa7.74□□□□□ -1.17
CKS1B-204ENST00000471245 MCMBPQ9BTE3 642 aa7.74□□□□□ -1.17
CKS1B-204ENST00000471245 DUSP15Q9H1R2 295 aaPredicted RBP7.74□□□□□ -1.17
CKS1B-204ENST00000471245 ATP8A1Q9Y2Q0 1164 aa7.74□□□□□ -1.17
CKS1B-204ENST00000471245 SETD1AO15047 1707 aaKnown RBP7.74□□□□□ -1.17
CKS1B-204ENST00000471245 XIRP1Q702N8 1843 aaKnown RBP7.73□□□□□ -1.17
CKS1B-204ENST00000471245 IQGAP1P46940 1657 aa7.73□□□□□ -1.17
CKS1B-204ENST00000471245 BLACEA4D250 179 aa7.73□□□□□ -1.17
CKS1B-204ENST00000471245 STXBP3O00186 592 aa7.73□□□□□ -1.17
CKS1B-204ENST00000471245 MEIS1O00470 390 aa7.73□□□□□ -1.17
CKS1B-204ENST00000471245 AQP7O14520 342 aa7.73□□□□□ -1.17
CKS1B-204ENST00000471245 NPTXRO95502 500 aa7.73□□□□□ -1.17
CKS1B-204ENST00000471245 OXCT1P55809 520 aa7.73□□□□□ -1.17
CKS1B-204ENST00000471245 ZMYM1Q5SVZ6 1142 aa7.73□□□□□ -1.17
CKS1B-204ENST00000471245 RCSD1Q6JBY9 416 aa7.73□□□□□ -1.17
CKS1B-204ENST00000471245 RSPO2Q6UXX9 243 aaPredicted RBP7.73□□□□□ -1.17
CKS1B-204ENST00000471245 THAP5Q7Z6K1 395 aa7.73□□□□□ -1.17
CKS1B-204ENST00000471245 AHI1Q8N157 1196 aa7.73□□□□□ -1.17
CKS1B-204ENST00000471245 AFAP1L2Q8N4X5 818 aa7.73□□□□□ -1.17
CKS1B-204ENST00000471245 NPLOC4Q8TAT6 608 aa7.73□□□□□ -1.17
CKS1B-204ENST00000471245 TCTN2Q96GX1 697 aa7.73□□□□□ -1.17
CKS1B-204ENST00000471245 RGS17Q9UGC6 210 aaPredicted RBP7.73□□□□□ -1.17
CKS1B-204ENST00000471245 MCM8Q9UJA3 840 aa7.73□□□□□ -1.17
CKS1B-204ENST00000471245 NPFFR2Q9Y5X5 522 aa7.73□□□□□ -1.17
CKS1B-204ENST00000471245 DEPDC5O75140 1603 aa7.73□□□□□ -1.17
CKS1B-204ENST00000471245 A2MP01023 1474 aa7.73□□□□□ -1.17
CKS1B-204ENST00000471245 SYNMO15061 1565 aa7.72□□□□□ -1.17
CKS1B-204ENST00000471245 FAM83GA6ND36 823 aa7.72□□□□□ -1.17
CKS1B-204ENST00000471245 KIAA1324LA8MWY0 1029 aaPredicted RBP7.72□□□□□ -1.17
CKS1B-204ENST00000471245 RBAK-RBAKDNI3L0D1 243 aa7.72□□□□□ -1.17
CKS1B-204ENST00000471245 ZNF205O95201 554 aa7.72□□□□□ -1.17
CKS1B-204ENST00000471245 THBDP07204 575 aa7.72□□□□□ -1.17
CKS1B-204ENST00000471245 IGFALSP35858 605 aa7.72□□□□□ -1.17
CKS1B-204ENST00000471245 CLCN7P51798 805 aa7.72□□□□□ -1.17
CKS1B-204ENST00000471245 E4F1Q66K89 784 aaPredicted RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms