RNA–Protein interactions for RNA: ENST00000470835.1

LMNA-212, Transcript of lamin A/C, humanhuman

TSL 3

Gene LMNA, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-212ENST00000470835 GPHNQ9NQX3 736 aaPredicted RBP20.23■□□□□ 0.83
LMNA-212ENST00000470835 TRMT13Q9NUP7 481 aaKnown RBP20.23■□□□□ 0.83
LMNA-212ENST00000470835 CXXC1Q9P0U4 656 aaPredicted RBP20.23■□□□□ 0.83
LMNA-212ENST00000470835 ZSWIM5Q9P217 1185 aa20.23■□□□□ 0.83
LMNA-212ENST00000470835 CTNNA3Q9UI47 895 aa20.23■□□□□ 0.83
LMNA-212ENST00000470835 MYH7BA7E2Y1 1941 aa20.23■□□□□ 0.83
LMNA-212ENST00000470835 ABCB11O95342 1321 aa20.23■□□□□ 0.83
LMNA-212ENST00000470835 FGBP02675 491 aa20.22■□□□□ 0.83
LMNA-212ENST00000470835 OTOP2Q7RTS6 562 aa20.22■□□□□ 0.83
LMNA-212ENST00000470835 RGS22Q8NE09 1264 aa20.22■□□□□ 0.83
LMNA-212ENST00000470835 COPS5Q92905 334 aa20.22■□□□□ 0.83
LMNA-212ENST00000470835 KRT23Q9C075 422 aa20.22■□□□□ 0.83
LMNA-212ENST00000470835 TRIP12Q14669 1992 aaPredicted RBP20.22■□□□□ 0.83
LMNA-212ENST00000470835 DHX16O60231 1041 aaKnown RBP20.21■□□□□ 0.83
LMNA-212ENST00000470835 SUPT20HL2P0C7V6 817 aa20.21■□□□□ 0.83
LMNA-212ENST00000470835 TXNP10599 105 aaKnown RBP20.21■□□□□ 0.83
LMNA-212ENST00000470835 CYP2C9P11712 490 aa20.21■□□□□ 0.83
LMNA-212ENST00000470835 SCLYQ96I15 445 aa20.21■□□□□ 0.83
LMNA-212ENST00000470835 UBAC1Q9BSL1 405 aa20.21■□□□□ 0.83
LMNA-212ENST00000470835 IL25Q9H293 177 aa20.21■□□□□ 0.83
LMNA-212ENST00000470835 CNNM2Q9H8M5 875 aa20.21■□□□□ 0.83
LMNA-212ENST00000470835 ARIH2O95376 493 aa20.2■□□□□ 0.82
LMNA-212ENST00000470835 PARP1P09874 1014 aaKnown RBP20.2■□□□□ 0.82
LMNA-212ENST00000470835 TTLL4Q14679 1199 aa20.2■□□□□ 0.82
LMNA-212ENST00000470835 RAB30Q15771 203 aa20.2■□□□□ 0.82
LMNA-212ENST00000470835 QRICH1Q2TAL8 776 aa20.2■□□□□ 0.82
LMNA-212ENST00000470835 FAM47CQ5HY64 1035 aa20.2■□□□□ 0.82
LMNA-212ENST00000470835 SYTL5Q8TDW5 730 aaPredicted RBP20.2■□□□□ 0.82
LMNA-212ENST00000470835 TBC1D5Q92609 795 aa20.2■□□□□ 0.82
LMNA-212ENST00000470835 COL20A1Q9P218 1284 aa20.2■□□□□ 0.82
LMNA-212ENST00000470835 A6NJR5 290 aa20.19■□□□□ 0.82
LMNA-212ENST00000470835 KPNA6O60684 536 aa20.19■□□□□ 0.82
LMNA-212ENST00000470835 NBPF20Q3BBV1 942 aa20.19■□□□□ 0.82
LMNA-212ENST00000470835 FBXO11Q86XK2 927 aa20.19■□□□□ 0.82
LMNA-212ENST00000470835 RPUSD2Q8IZ73 545 aaKnown RBP20.19■□□□□ 0.82
LMNA-212ENST00000470835 PPP1R13LQ8WUF5 828 aa20.19■□□□□ 0.82
LMNA-212ENST00000470835 MAF1Q9H063 256 aa20.19■□□□□ 0.82
LMNA-212ENST00000470835 MSRAQ9UJ68 235 aa20.19■□□□□ 0.82
LMNA-212ENST00000470835 BAZ2BQ9UIF8 2168 aaKnown RBP20.18■□□□□ 0.82
LMNA-212ENST00000470835 IFIT1BQ5T764 474 aaKnown RBP20.18■□□□□ 0.82
LMNA-212ENST00000470835 NFRKBQ6P4R8 1299 aa20.18■□□□□ 0.82
LMNA-212ENST00000470835 MCF2L2Q86YR7 1114 aa20.18■□□□□ 0.82
LMNA-212ENST00000470835 USP38Q8NB14 1042 aa20.18■□□□□ 0.82
LMNA-212ENST00000470835 NSUN6Q8TEA1 469 aaKnown RBP20.18■□□□□ 0.82
LMNA-212ENST00000470835 TAAR1Q96RJ0 339 aa20.18■□□□□ 0.82
LMNA-212ENST00000470835 GAS2L1Q99501 681 aaPredicted RBP20.18■□□□□ 0.82
LMNA-212ENST00000470835 NKX2-4Q9H2Z4 354 aa20.18■□□□□ 0.82
LMNA-212ENST00000470835 PRDM12Q9H4Q4 367 aa20.18■□□□□ 0.82
LMNA-212ENST00000470835 JMJD4Q9H9V9 463 aa20.18■□□□□ 0.82
LMNA-212ENST00000470835 VAT1LQ9HCJ6 419 aa20.18■□□□□ 0.82
LMNA-212ENST00000470835 MRPL11Q9Y3B7 192 aaKnown RBP20.18■□□□□ 0.82
LMNA-212ENST00000470835 TET1Q8NFU7 2136 aa20.18■□□□□ 0.82
LMNA-212ENST00000470835 CHD7Q9P2D1 2997 aa20.18■□□□□ 0.82
LMNA-212ENST00000470835 ZBBXA8MT70 800 aa20.17■□□□□ 0.82
LMNA-212ENST00000470835 GSPT1P15170 499 aaKnown RBP20.17■□□□□ 0.82
LMNA-212ENST00000470835 PDE4AP27815 886 aa20.17■□□□□ 0.82
LMNA-212ENST00000470835 CCDC62Q6P9F0 684 aa20.17■□□□□ 0.82
LMNA-212ENST00000470835 SEPT14Q6ZU15 432 aa20.17■□□□□ 0.82
LMNA-212ENST00000470835 VWCEQ96DN2 955 aa20.17■□□□□ 0.82
LMNA-212ENST00000470835 RMDN3Q96TC7 470 aa20.17■□□□□ 0.82
LMNA-212ENST00000470835 PFKMP08237 780 aa20.16■□□□□ 0.82
LMNA-212ENST00000470835 CHMP4BP1P59074 171 aa20.16■□□□□ 0.82
LMNA-212ENST00000470835 TTC22Q5TAA0 569 aa20.16■□□□□ 0.82
LMNA-212ENST00000470835 DEFB128Q7Z7B8 93 aa20.16■□□□□ 0.82
LMNA-212ENST00000470835 STAG2Q8N3U4 1231 aa20.16■□□□□ 0.82
LMNA-212ENST00000470835 SLC28A3Q9HAS3 691 aa20.16■□□□□ 0.82
LMNA-212ENST00000470835 YBX2Q9Y2T7 364 aaKnown RBP20.16■□□□□ 0.82
LMNA-212ENST00000470835 SLC4A7Q9Y6M7 1214 aa20.16■□□□□ 0.82
LMNA-212ENST00000470835 TTC28Q96AY4 2481 aa20.16■□□□□ 0.82
LMNA-212ENST00000470835 PTPRSQ13332 1948 aa20.15■□□□□ 0.82
LMNA-212ENST00000470835 GH1P01241 217 aa20.15■□□□□ 0.82
LMNA-212ENST00000470835 MMP3P08254 477 aa20.15■□□□□ 0.82
LMNA-212ENST00000470835 EIF2AK2P19525 551 aaKnown RBP20.15■□□□□ 0.82
LMNA-212ENST00000470835 RABGGTBP53611 331 aa20.15■□□□□ 0.82
LMNA-212ENST00000470835 PTPN11Q06124 597 aaPredicted RBP20.15■□□□□ 0.82
LMNA-212ENST00000470835 ARHGAP1Q07960 439 aa20.15■□□□□ 0.82
LMNA-212ENST00000470835 SEC23AQ15436 765 aa20.15■□□□□ 0.82
LMNA-212ENST00000470835 STXBP2Q15833 593 aa20.15■□□□□ 0.82
LMNA-212ENST00000470835 LY6KQ17RY6 165 aa20.15■□□□□ 0.82
LMNA-212ENST00000470835 ARHGEF16Q5VV41 709 aa20.15■□□□□ 0.82
LMNA-212ENST00000470835 CYB5R4Q7L1T6 521 aa20.15■□□□□ 0.82
LMNA-212ENST00000470835 AFG1LQ8WV93 481 aa20.15■□□□□ 0.82
LMNA-212ENST00000470835 IWS1Q96ST2 819 aa20.15■□□□□ 0.82
LMNA-212ENST00000470835 AMNQ9BXJ7 453 aa20.15■□□□□ 0.82
LMNA-212ENST00000470835 KLRF2D3W0D1 207 aa20.14■□□□□ 0.81
LMNA-212ENST00000470835 PITPNM1O00562 1244 aa20.14■□□□□ 0.81
LMNA-212ENST00000470835 CFBP00751 764 aa20.14■□□□□ 0.81
LMNA-212ENST00000470835 CHST3Q7LGC8 479 aa20.14■□□□□ 0.81
LMNA-212ENST00000470835 NOD1Q9Y239 953 aa20.14■□□□□ 0.81
LMNA-212ENST00000470835 OPLAHO14841 1288 aa20.13■□□□□ 0.81
LMNA-212ENST00000470835 ATP2A2P16615 1042 aaKnown RBP20.13■□□□□ 0.81
LMNA-212ENST00000470835 TRDNQ13061 729 aa20.13■□□□□ 0.81
LMNA-212ENST00000470835 RETREG2Q8NC44 543 aa20.13■□□□□ 0.81
LMNA-212ENST00000470835 PPM1EQ8WY54 764 aa20.13■□□□□ 0.81
LMNA-212ENST00000470835 PXMP2Q9NR77 195 aa20.13■□□□□ 0.81
LMNA-212ENST00000470835 SUPT16HQ9Y5B9 1047 aaKnown RBP20.13■□□□□ 0.81
LMNA-212ENST00000470835 SPTBN5Q9NRC6 3674 aaKnown RBP20.13■□□□□ 0.81
LMNA-212ENST00000470835 PPP1R11O60927 126 aaPredicted RBP20.12■□□□□ 0.81
LMNA-212ENST00000470835 ACTN1P12814 892 aa20.12■□□□□ 0.81
LMNA-212ENST00000470835 MYOGP15173 224 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms