RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 PPP2R2AP63151 447 aa6.3□□□□□ -1.4
COL9A1-206ENST00000470652 SRSF3P84103 164 aaKnown RBP6.3□□□□□ -1.4
COL9A1-206ENST00000470652 CBX2Q14781 532 aaPredicted RBP6.3□□□□□ -1.4
COL9A1-206ENST00000470652 E4F1Q66K89 784 aaPredicted RBP6.3□□□□□ -1.4
COL9A1-206ENST00000470652 BICRALQ6AI39 1079 aa6.3□□□□□ -1.4
COL9A1-206ENST00000470652 PAQR3Q6TCH7 311 aa6.3□□□□□ -1.4
COL9A1-206ENST00000470652 FRS2Q8WU20 508 aa6.3□□□□□ -1.4
COL9A1-206ENST00000470652 ZNF669Q96BR6 464 aaPredicted RBP6.3□□□□□ -1.4
COL9A1-206ENST00000470652 CCDC113Q9H0I3 377 aa6.3□□□□□ -1.4
COL9A1-206ENST00000470652 SIRT5Q9NXA8 310 aa6.3□□□□□ -1.4
COL9A1-206ENST00000470652 MSRB2Q9Y3D2 182 aa6.3□□□□□ -1.4
COL9A1-206ENST00000470652 NUDT19A8MXV4 375 aa6.29□□□□□ -1.4
COL9A1-206ENST00000470652 HOXA5P20719 270 aa6.29□□□□□ -1.4
COL9A1-206ENST00000470652 KCNJ6P48051 423 aa6.29□□□□□ -1.4
COL9A1-206ENST00000470652 GFRA1P56159 465 aa6.29□□□□□ -1.4
COL9A1-206ENST00000470652 LINC00310P59036 64 aa6.29□□□□□ -1.4
COL9A1-206ENST00000470652 CYP4F3Q08477 520 aa6.29□□□□□ -1.4
COL9A1-206ENST00000470652 HSP90AA2PQ14568 343 aaPredicted RBP6.29□□□□□ -1.4
COL9A1-206ENST00000470652 CABP7Q86V35 215 aa6.29□□□□□ -1.4
COL9A1-206ENST00000470652 LRRC47Q8N1G4 583 aaKnown RBP6.29□□□□□ -1.4
COL9A1-206ENST00000470652 LZTR1Q8N653 840 aa6.29□□□□□ -1.4
COL9A1-206ENST00000470652 NPLOC4Q8TAT6 608 aa6.29□□□□□ -1.4
COL9A1-206ENST00000470652 C20orf173Q96LM9 149 aa6.29□□□□□ -1.4
COL9A1-206ENST00000470652 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.29□□□□□ -1.4
COL9A1-206ENST00000470652 PDPK1O15530 556 aa6.28□□□□□ -1.4
COL9A1-206ENST00000470652 DBHP09172 617 aa6.28□□□□□ -1.4
COL9A1-206ENST00000470652 TACR1P25103 407 aa6.28□□□□□ -1.4
COL9A1-206ENST00000470652 VIPR1P32241 457 aa6.28□□□□□ -1.4
COL9A1-206ENST00000470652 MAPKAPK2P49137 400 aa6.28□□□□□ -1.4
COL9A1-206ENST00000470652 DLG4P78352 724 aa6.28□□□□□ -1.4
COL9A1-206ENST00000470652 SF1Q15637 639 aaKnown RBP6.28□□□□□ -1.4
COL9A1-206ENST00000470652 ACBD5Q5T8D3 534 aaPredicted RBP6.28□□□□□ -1.4
COL9A1-206ENST00000470652 RPTNQ6XPR3 784 aa6.28□□□□□ -1.4
COL9A1-206ENST00000470652 SREK1Q8WXA9 508 aaKnown RBP6.28□□□□□ -1.4
COL9A1-206ENST00000470652 KCTD13Q8WZ19 329 aa6.28□□□□□ -1.4
COL9A1-206ENST00000470652 GULP1Q9UBP9 304 aa6.28□□□□□ -1.4
COL9A1-206ENST00000470652 RWDD3Q9Y3V2 267 aa6.28□□□□□ -1.4
COL9A1-206ENST00000470652 KIF21AQ7Z4S6 1674 aa6.28□□□□□ -1.4
COL9A1-206ENST00000470652 MEFVO15553 781 aaPredicted RBP6.27□□□□□ -1.41
COL9A1-206ENST00000470652 GLI4P10075 376 aa6.27□□□□□ -1.41
COL9A1-206ENST00000470652 MAP4K2Q12851 820 aa6.27□□□□□ -1.41
COL9A1-206ENST00000470652 KCNAB2Q13303 367 aa6.27□□□□□ -1.41
COL9A1-206ENST00000470652 RASGRF1Q13972 1273 aa6.27□□□□□ -1.41
COL9A1-206ENST00000470652 TESK1Q15569 626 aa6.27□□□□□ -1.41
COL9A1-206ENST00000470652 ZC3H14Q6PJT7 736 aaKnown RBP6.27□□□□□ -1.41
COL9A1-206ENST00000470652 LRP10Q7Z4F1 713 aa6.27□□□□□ -1.41
COL9A1-206ENST00000470652 TMEM145Q8NBT3 493 aa6.27□□□□□ -1.41
COL9A1-206ENST00000470652 KREMEN2Q8NCW0 462 aa6.27□□□□□ -1.41
COL9A1-206ENST00000470652 USP33Q8TEY7 942 aa6.27□□□□□ -1.41
COL9A1-206ENST00000470652 DIO2Q92813 273 aa6.27□□□□□ -1.41
COL9A1-206ENST00000470652 RELTQ969Z4 430 aa6.27□□□□□ -1.41
COL9A1-206ENST00000470652 MTA3Q9BTC8 594 aa6.27□□□□□ -1.41
COL9A1-206ENST00000470652 CCDC85CA6NKD9 419 aa6.26□□□□□ -1.41
COL9A1-206ENST00000470652 F8W031 263 aaPredicted RBP6.26□□□□□ -1.41
COL9A1-206ENST00000470652 PPP1R11O60927 126 aaPredicted RBP6.26□□□□□ -1.41
COL9A1-206ENST00000470652 GRIA2P42262 883 aa6.26□□□□□ -1.41
COL9A1-206ENST00000470652 GTF2A2P52657 109 aa6.26□□□□□ -1.41
COL9A1-206ENST00000470652 SERINC3Q13530 473 aa6.26□□□□□ -1.41
COL9A1-206ENST00000470652 INF2Q27J81 1249 aa6.26□□□□□ -1.41
COL9A1-206ENST00000470652 PRSS53Q2L4Q9 553 aa6.26□□□□□ -1.41
COL9A1-206ENST00000470652 MTERF2Q49AM1 385 aa6.26□□□□□ -1.41
COL9A1-206ENST00000470652 SLC35F1Q5T1Q4 408 aa6.26□□□□□ -1.41
COL9A1-206ENST00000470652 MBLAC2Q68D91 279 aa6.26□□□□□ -1.41
COL9A1-206ENST00000470652 TMC6Q7Z403 805 aa6.26□□□□□ -1.41
COL9A1-206ENST00000470652 PPIL6Q8IXY8 311 aa6.26□□□□□ -1.41
COL9A1-206ENST00000470652 NETO2Q8NC67 525 aa6.26□□□□□ -1.41
COL9A1-206ENST00000470652 AARSD1Q9BTE6 412 aaKnown RBP6.26□□□□□ -1.41
COL9A1-206ENST00000470652 IER2Q9BTL4 223 aa6.26□□□□□ -1.41
COL9A1-206ENST00000470652 SGPP1Q9BX95 441 aa6.26□□□□□ -1.41
COL9A1-206ENST00000470652 GCM1Q9NP62 436 aa6.26□□□□□ -1.41
COL9A1-206ENST00000470652 PARD6AQ9NPB6 346 aa6.26□□□□□ -1.41
COL9A1-206ENST00000470652 MBD1Q9UIS9 605 aaPredicted RBP6.26□□□□□ -1.41
COL9A1-206ENST00000470652 DBR1Q9UK59 544 aaKnown RBP6.26□□□□□ -1.41
COL9A1-206ENST00000470652 TIMM13Q9Y5L4 95 aaPredicted RBP6.26□□□□□ -1.41
COL9A1-206ENST00000470652 PRDM2Q13029 1718 aa6.25□□□□□ -1.41
COL9A1-206ENST00000470652 MYO1BO43795 1136 aa6.25□□□□□ -1.41
COL9A1-206ENST00000470652 FUCA1P04066 466 aa6.25□□□□□ -1.41
COL9A1-206ENST00000470652 FGFR1P11362 822 aa6.25□□□□□ -1.41
COL9A1-206ENST00000470652 BMP7P18075 431 aa6.25□□□□□ -1.41
COL9A1-206ENST00000470652 LTBRP36941 435 aa6.25□□□□□ -1.41
COL9A1-206ENST00000470652 RPL11P62913 178 aaKnown RBP6.25□□□□□ -1.41
COL9A1-206ENST00000470652 PLEKHN1Q494U1 663 aaPredicted RBP6.25□□□□□ -1.41
COL9A1-206ENST00000470652 CCDC103Q8IW40 242 aa6.25□□□□□ -1.41
COL9A1-206ENST00000470652 DPF3Q92784 378 aa6.25□□□□□ -1.41
COL9A1-206ENST00000470652 C1orf159Q96HA4 380 aa6.25□□□□□ -1.41
COL9A1-206ENST00000470652 PEX11GQ96HA9 241 aa6.25□□□□□ -1.41
COL9A1-206ENST00000470652 ZCCHC4Q9H5U6 513 aa6.25□□□□□ -1.41
COL9A1-206ENST00000470652 MARCH2Q9P0N8 246 aa6.25□□□□□ -1.41
COL9A1-206ENST00000470652 TMEFF2Q9UIK5 374 aaPredicted RBP6.25□□□□□ -1.41
COL9A1-206ENST00000470652 NUDT5Q9UKK9 219 aa6.25□□□□□ -1.41
COL9A1-206ENST00000470652 ABCC8Q09428 1581 aa6.24□□□□□ -1.41
COL9A1-206ENST00000470652 TRAV20A0A0B4J274 112 aa6.24□□□□□ -1.41
COL9A1-206ENST00000470652 ARNTLO00327 626 aa6.24□□□□□ -1.41
COL9A1-206ENST00000470652 N4BP3O15049 544 aa6.24□□□□□ -1.41
COL9A1-206ENST00000470652 SPATC1Q76KD6 591 aa6.24□□□□□ -1.41
COL9A1-206ENST00000470652 LDHDQ86WU2 507 aa6.24□□□□□ -1.41
COL9A1-206ENST00000470652 PLEKHO2Q8TD55 490 aa6.24□□□□□ -1.41
COL9A1-206ENST00000470652 MZB1Q8WU39 189 aa6.24□□□□□ -1.41
COL9A1-206ENST00000470652 MKL1Q969V6 931 aa6.24□□□□□ -1.41
COL9A1-206ENST00000470652 SPATA9Q9BWV2 254 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms