RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.7□□□□□ -1.18
VAMP3-202ENST00000470357 CABP5Q9NP86 173 aa7.7□□□□□ -1.18
VAMP3-202ENST00000470357 INCENPQ9NQS7 918 aa7.7□□□□□ -1.18
VAMP3-202ENST00000470357 SYNPO2Q9UMS6 1093 aa7.7□□□□□ -1.18
VAMP3-202ENST00000470357 PCDHAC2Q9Y5I4 1007 aa7.7□□□□□ -1.18
VAMP3-202ENST00000470357 TACC3Q9Y6A5 838 aa7.7□□□□□ -1.18
VAMP3-202ENST00000470357 TRIOBPQ9H2D6 2365 aa7.7□□□□□ -1.18
VAMP3-202ENST00000470357 GOLGA8AA7E2F4 631 aa7.69□□□□□ -1.18
VAMP3-202ENST00000470357 WFS1O76024 890 aa7.69□□□□□ -1.18
VAMP3-202ENST00000470357 LARGE1O95461 756 aa7.69□□□□□ -1.18
VAMP3-202ENST00000470357 TTLL1O95922 423 aa7.69□□□□□ -1.18
VAMP3-202ENST00000470357 IL2RAP01589 272 aa7.69□□□□□ -1.18
VAMP3-202ENST00000470357 SHMT1P34896 483 aa7.69□□□□□ -1.18
VAMP3-202ENST00000470357 DDIT3P35638 169 aa7.69□□□□□ -1.18
VAMP3-202ENST00000470357 NOVP48745 357 aa7.69□□□□□ -1.18
VAMP3-202ENST00000470357 MAP3K10Q02779 954 aa7.69□□□□□ -1.18
VAMP3-202ENST00000470357 PTSQ03393 145 aa7.69□□□□□ -1.18
VAMP3-202ENST00000470357 SCRN1Q12765 414 aa7.69□□□□□ -1.18
VAMP3-202ENST00000470357 STK3Q13188 491 aa7.69□□□□□ -1.18
VAMP3-202ENST00000470357 NCOA4Q13772 614 aa7.69□□□□□ -1.18
VAMP3-202ENST00000470357 RASA3Q14644 834 aa7.69□□□□□ -1.18
VAMP3-202ENST00000470357 RTN1Q16799 776 aa7.69□□□□□ -1.18
VAMP3-202ENST00000470357 ABCB5Q2M3G0 1257 aa7.69□□□□□ -1.18
VAMP3-202ENST00000470357 EML3Q32P44 896 aa7.69□□□□□ -1.18
VAMP3-202ENST00000470357 SUPT20HL1Q3ZLR7 823 aa7.69□□□□□ -1.18
VAMP3-202ENST00000470357 FAM47AQ5JRC9 791 aa7.69□□□□□ -1.18
VAMP3-202ENST00000470357 LDLRAD1Q5T700 205 aa7.69□□□□□ -1.18
VAMP3-202ENST00000470357 OTOP1Q7RTM1 612 aa7.69□□□□□ -1.18
VAMP3-202ENST00000470357 LYSMD3Q7Z3D4 306 aa7.69□□□□□ -1.18
VAMP3-202ENST00000470357 MICU3Q86XE3 530 aa7.69□□□□□ -1.18
VAMP3-202ENST00000470357 ZFPM1Q8IX07 1006 aa7.69□□□□□ -1.18
VAMP3-202ENST00000470357 TRIM22Q8IYM9 498 aa7.69□□□□□ -1.18
VAMP3-202ENST00000470357 NECAB1Q8N987 351 aa7.69□□□□□ -1.18
VAMP3-202ENST00000470357 SLC44A5Q8NCS7 719 aa7.69□□□□□ -1.18
VAMP3-202ENST00000470357 LZTS2Q9BRK4 669 aa7.69□□□□□ -1.18
VAMP3-202ENST00000470357 ZKSCAN3Q9BRR0 538 aa7.69□□□□□ -1.18
VAMP3-202ENST00000470357 DEFB129Q9H1M3 183 aa7.69□□□□□ -1.18
VAMP3-202ENST00000470357 SH2D4AQ9H788 454 aa7.69□□□□□ -1.18
VAMP3-202ENST00000470357 BRPF3Q9ULD4 1205 aa7.69□□□□□ -1.18
VAMP3-202ENST00000470357 DOCK1Q14185 1865 aa7.68□□□□□ -1.18
VAMP3-202ENST00000470357 LAMA3Q16787 3333 aa7.68□□□□□ -1.18
VAMP3-202ENST00000470357 USP17L5A8MUK1 530 aa7.68□□□□□ -1.18
VAMP3-202ENST00000470357 SMIM22K7EJ46 135 aa7.68□□□□□ -1.18
VAMP3-202ENST00000470357 MPHOSPH10O00566 681 aaKnown RBP7.68□□□□□ -1.18
VAMP3-202ENST00000470357 ASNSP08243 561 aa7.68□□□□□ -1.18
VAMP3-202ENST00000470357 RHOQP17081 205 aa7.68□□□□□ -1.18
VAMP3-202ENST00000470357 IFNAR1P17181 557 aa7.68□□□□□ -1.18
VAMP3-202ENST00000470357 EN2P19622 333 aaPredicted RBP7.68□□□□□ -1.18
VAMP3-202ENST00000470357 GJB2P29033 226 aa7.68□□□□□ -1.18
VAMP3-202ENST00000470357 CCT2P78371 535 aaKnown RBP7.68□□□□□ -1.18
VAMP3-202ENST00000470357 AKAP17AQ02040 695 aaKnown RBP7.68□□□□□ -1.18
VAMP3-202ENST00000470357 CENPCQ03188 943 aa7.68□□□□□ -1.18
VAMP3-202ENST00000470357 TROAPQ12815 778 aa7.68□□□□□ -1.18
VAMP3-202ENST00000470357 COL9A3Q14050 684 aaPredicted RBP7.68□□□□□ -1.18
VAMP3-202ENST00000470357 RCSD1Q6JBY9 416 aa7.68□□□□□ -1.18
VAMP3-202ENST00000470357 FANCBQ8NB91 859 aa7.68□□□□□ -1.18
VAMP3-202ENST00000470357 SMARCC2Q8TAQ2 1214 aa7.68□□□□□ -1.18
VAMP3-202ENST00000470357 NUP133Q8WUM0 1156 aa7.68□□□□□ -1.18
VAMP3-202ENST00000470357 ARMC5Q96C12 935 aa7.68□□□□□ -1.18
VAMP3-202ENST00000470357 CEP95Q96GE4 821 aa7.68□□□□□ -1.18
VAMP3-202ENST00000470357 GRIP2Q9C0E4 1043 aa7.68□□□□□ -1.18
VAMP3-202ENST00000470357 TMEM39BQ9GZU3 492 aa7.68□□□□□ -1.18
VAMP3-202ENST00000470357 MTMR4Q9NYA4 1195 aa7.68□□□□□ -1.18
VAMP3-202ENST00000470357 NYAP2Q9P242 653 aa7.68□□□□□ -1.18
VAMP3-202ENST00000470357 TFIP11Q9UBB9 837 aaKnown RBP7.68□□□□□ -1.18
VAMP3-202ENST00000470357 STX8Q9UNK0 236 aa7.68□□□□□ -1.18
VAMP3-202ENST00000470357 NOD1Q9Y239 953 aa7.68□□□□□ -1.18
VAMP3-202ENST00000470357 ATP6V1DQ9Y5K8 247 aa7.68□□□□□ -1.18
VAMP3-202ENST00000470357 STK36Q9NRP7 1315 aa7.68□□□□□ -1.18
VAMP3-202ENST00000470357 COL6A3P12111 3177 aa7.68□□□□□ -1.18
VAMP3-202ENST00000470357 CUL9Q8IWT3 2517 aa7.68□□□□□ -1.18
VAMP3-202ENST00000470357 IGKV6D-41A0A0C4DH26 115 aa7.67□□□□□ -1.18
VAMP3-202ENST00000470357 PTPDC1A2A3K4 754 aa7.67□□□□□ -1.18
VAMP3-202ENST00000470357 ATP9BO43861 1147 aa7.67□□□□□ -1.18
VAMP3-202ENST00000470357 LZTS3O60299 673 aaPredicted RBP7.67□□□□□ -1.18
VAMP3-202ENST00000470357 PPFIA3O75145 1194 aa7.67□□□□□ -1.18
VAMP3-202ENST00000470357 AKR1B1P15121 316 aa7.67□□□□□ -1.18
VAMP3-202ENST00000470357 XBP1P17861 261 aa7.67□□□□□ -1.18
VAMP3-202ENST00000470357 SMARCA1P28370 1054 aa7.67□□□□□ -1.18
VAMP3-202ENST00000470357 GPC1P35052 558 aa7.67□□□□□ -1.18
VAMP3-202ENST00000470357 SSRP1Q08945 709 aaKnown RBP7.67□□□□□ -1.18
VAMP3-202ENST00000470357 SREBF2Q12772 1141 aa7.67□□□□□ -1.18
VAMP3-202ENST00000470357 POU4F2Q12837 409 aa7.67□□□□□ -1.18
VAMP3-202ENST00000470357 LARP1BQ659C4 914 aaKnown RBP7.67□□□□□ -1.18
VAMP3-202ENST00000470357 FAM177A1Q8N128 213 aaPredicted RBP7.67□□□□□ -1.18
VAMP3-202ENST00000470357 NSUN7Q8NE18 718 aaKnown RBP7.67□□□□□ -1.18
VAMP3-202ENST00000470357 TEPSINQ96N21 525 aa7.67□□□□□ -1.18
VAMP3-202ENST00000470357 TMEM47Q9BQJ4 181 aa7.67□□□□□ -1.18
VAMP3-202ENST00000470357 RNF26Q9BY78 433 aaPredicted RBP7.67□□□□□ -1.18
VAMP3-202ENST00000470357 ZNF341Q9BYN7 854 aa7.67□□□□□ -1.18
VAMP3-202ENST00000470357 DNAJC18Q9H819 358 aa7.67□□□□□ -1.18
VAMP3-202ENST00000470357 ETNK1Q9HBU6 452 aa7.67□□□□□ -1.18
VAMP3-202ENST00000470357 IL17RBQ9NRM6 502 aa7.67□□□□□ -1.18
VAMP3-202ENST00000470357 PTPN22Q9Y2R2 807 aa7.67□□□□□ -1.18
VAMP3-202ENST00000470357 TRIM17Q9Y577 477 aa7.67□□□□□ -1.18
VAMP3-202ENST00000470357 PCDHGA11Q9Y5H2 935 aa7.67□□□□□ -1.18
VAMP3-202ENST00000470357 RBBP6Q7Z6E9 1792 aaKnown RBP7.66□□□□□ -1.18
VAMP3-202ENST00000470357 MYH15Q9Y2K3 1946 aa7.66□□□□□ -1.18
VAMP3-202ENST00000470357 H3BM21 787 aa7.66□□□□□ -1.18
VAMP3-202ENST00000470357 H3BQV1 296 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms