RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 TRERF1Q96PN7 1200 aa22.45■■□□□ 1.18
CDHR3-207ENST00000470188 RIC8AQ9NPQ8 531 aa22.45■■□□□ 1.18
CDHR3-207ENST00000470188 PDE6BP35913 854 aa22.45■■□□□ 1.18
CDHR3-207ENST00000470188 TNNI2P48788 182 aa22.45■■□□□ 1.18
CDHR3-207ENST00000470188 ATP2B2Q01814 1243 aa22.45■■□□□ 1.18
CDHR3-207ENST00000470188 GRB10Q13322 594 aa22.45■■□□□ 1.18
CDHR3-207ENST00000470188 CCDC96Q2M329 555 aa22.45■■□□□ 1.18
CDHR3-207ENST00000470188 GPATCH4Q5T3I0 446 aaKnown RBP22.45■■□□□ 1.18
CDHR3-207ENST00000470188 TTBK2Q6IQ55 1244 aa22.45■■□□□ 1.18
CDHR3-207ENST00000470188 SV2BQ7L1I2 683 aa22.45■■□□□ 1.18
CDHR3-207ENST00000470188 COL23A1Q86Y22 540 aaPredicted RBP22.45■■□□□ 1.18
CDHR3-207ENST00000470188 VGLL3A8MV65 326 aa22.44■■□□□ 1.18
CDHR3-207ENST00000470188 FCER1AP12319 257 aa22.44■■□□□ 1.18
CDHR3-207ENST00000470188 CNNM4Q6P4Q7 775 aa22.44■■□□□ 1.18
CDHR3-207ENST00000470188 RAB34Q9BZG1 259 aa22.44■■□□□ 1.18
CDHR3-207ENST00000470188 STK17AQ9UEE5 414 aa22.44■■□□□ 1.18
CDHR3-207ENST00000470188 RAB21Q9UL25 225 aa22.44■■□□□ 1.18
CDHR3-207ENST00000470188 EDIL3O43854 480 aa22.43■■□□□ 1.18
CDHR3-207ENST00000470188 PPP1R11O60927 126 aaPredicted RBP22.43■■□□□ 1.18
CDHR3-207ENST00000470188 NFIAQ12857 509 aa22.43■■□□□ 1.18
CDHR3-207ENST00000470188 ANKRD40Q6AI12 368 aa22.43■■□□□ 1.18
CDHR3-207ENST00000470188 HDXQ7Z353 690 aa22.43■■□□□ 1.18
CDHR3-207ENST00000470188 CDK5RAP3Q96JB5 506 aa22.43■■□□□ 1.18
CDHR3-207ENST00000470188 RASSF4Q9H2L5 321 aa22.43■■□□□ 1.18
CDHR3-207ENST00000470188 TTC26A0AVF1 554 aa22.43■■□□□ 1.18
CDHR3-207ENST00000470188 ERLIN1O75477 346 aa22.43■■□□□ 1.18
CDHR3-207ENST00000470188 DNM2P50570 870 aa22.43■■□□□ 1.18
CDHR3-207ENST00000470188 UBE2SQ16763 222 aa22.43■■□□□ 1.18
CDHR3-207ENST00000470188 FAM114A1Q8IWE2 563 aa22.43■■□□□ 1.18
CDHR3-207ENST00000470188 TUBGCP2Q9BSJ2 902 aa22.43■■□□□ 1.18
CDHR3-207ENST00000470188 TRIM34Q9BYJ4 488 aa22.43■■□□□ 1.18
CDHR3-207ENST00000470188 BLOC1S4Q9NUP1 217 aa22.43■■□□□ 1.18
CDHR3-207ENST00000470188 ADAMTSL1Q8N6G6 1762 aa22.43■■□□□ 1.18
CDHR3-207ENST00000470188 B4DLN1 442 aa22.42■■□□□ 1.18
CDHR3-207ENST00000470188 EIF3JO75822 258 aaKnown RBP22.42■■□□□ 1.18
CDHR3-207ENST00000470188 ACTN2P35609 894 aa22.42■■□□□ 1.18
CDHR3-207ENST00000470188 SLC16A2P36021 539 aa22.42■■□□□ 1.18
CDHR3-207ENST00000470188 CRKP46108 304 aa22.42■■□□□ 1.18
CDHR3-207ENST00000470188 ZNF569Q5MCW4 686 aa22.42■■□□□ 1.18
CDHR3-207ENST00000470188 MSANTD4Q8NCY6 345 aa22.42■■□□□ 1.18
CDHR3-207ENST00000470188 OR8K1Q8NGG5 319 aa22.42■■□□□ 1.18
CDHR3-207ENST00000470188 IPO4Q8TEX9 1081 aaKnown RBP22.42■■□□□ 1.18
CDHR3-207ENST00000470188 CUL5Q93034 780 aa22.42■■□□□ 1.18
CDHR3-207ENST00000470188 MASTLQ96GX5 879 aa22.42■■□□□ 1.18
CDHR3-207ENST00000470188 PNMA5Q96PV4 448 aa22.42■■□□□ 1.18
CDHR3-207ENST00000470188 EHD4Q9H223 541 aa22.42■■□□□ 1.18
CDHR3-207ENST00000470188 NRXN2Q9P2S2 1712 aa22.42■■□□□ 1.18
CDHR3-207ENST00000470188 CDC23Q9UJX2 597 aa22.42■■□□□ 1.18
CDHR3-207ENST00000470188 LUC7L2Q9Y383 392 aaKnown RBP22.42■■□□□ 1.18
CDHR3-207ENST00000470188 H3BQF6 201 aa22.42■■□□□ 1.18
CDHR3-207ENST00000470188 LMAN1P49257 510 aa22.42■■□□□ 1.18
CDHR3-207ENST00000470188 PDIA5Q14554 519 aa22.42■■□□□ 1.18
CDHR3-207ENST00000470188 COBLL1Q53SF7 1204 aa22.42■■□□□ 1.18
CDHR3-207ENST00000470188 KCTD1Q719H9 257 aa22.42■■□□□ 1.18
CDHR3-207ENST00000470188 POTEMA6NI47 508 aa22.41■■□□□ 1.18
CDHR3-207ENST00000470188 USP17L10C9JJH3 530 aa22.41■■□□□ 1.18
CDHR3-207ENST00000470188 ZBTB5O15062 677 aa22.41■■□□□ 1.18
CDHR3-207ENST00000470188 IVLP07476 585 aa22.41■■□□□ 1.18
CDHR3-207ENST00000470188 CLK2P49760 499 aaKnown RBP22.41■■□□□ 1.18
CDHR3-207ENST00000470188 MCM6Q14566 821 aa22.41■■□□□ 1.18
CDHR3-207ENST00000470188 BEND6Q5SZJ8 279 aaPredicted RBP22.41■■□□□ 1.18
CDHR3-207ENST00000470188 PPP4R3AQ6IN85 833 aa22.41■■□□□ 1.18
CDHR3-207ENST00000470188 KIAA0895Q8NCT3 520 aa22.41■■□□□ 1.18
CDHR3-207ENST00000470188 LARP4BQ92615 738 aaKnown RBP22.41■■□□□ 1.18
CDHR3-207ENST00000470188 EEF2KMTQ96G04 330 aa22.41■■□□□ 1.18
CDHR3-207ENST00000470188 CNOT6LQ96LI5 555 aaKnown RBP22.41■■□□□ 1.18
CDHR3-207ENST00000470188 CCDC17Q96LX7 622 aa22.41■■□□□ 1.18
CDHR3-207ENST00000470188 DBNDD1Q9H9R9 158 aa22.41■■□□□ 1.18
CDHR3-207ENST00000470188 CAPN11Q9UMQ6 739 aa22.41■■□□□ 1.18
CDHR3-207ENST00000470188 TUBBP07437 444 aa22.4■■□□□ 1.18
CDHR3-207ENST00000470188 MMP10P09238 476 aa22.4■■□□□ 1.18
CDHR3-207ENST00000470188 MRPL12P52815 198 aaKnown RBP22.4■■□□□ 1.18
CDHR3-207ENST00000470188 KRT79Q5XKE5 535 aa22.4■■□□□ 1.18
CDHR3-207ENST00000470188 SNX29Q8TEQ0 813 aa22.4■■□□□ 1.18
CDHR3-207ENST00000470188 HPS3Q969F9 1004 aa22.4■■□□□ 1.18
CDHR3-207ENST00000470188 DNAJC7Q99615 494 aa22.4■■□□□ 1.18
CDHR3-207ENST00000470188 SLF1Q9BQI6 1058 aa22.4■■□□□ 1.18
CDHR3-207ENST00000470188 MYMKA6NI61 221 aa22.4■■□□□ 1.18
CDHR3-207ENST00000470188 MYO1CO00159 1063 aa22.4■■□□□ 1.18
CDHR3-207ENST00000470188 SLURP2P0DP57 97 aa22.4■■□□□ 1.18
CDHR3-207ENST00000470188 LEKR1Q6ZMV7 388 aa22.4■■□□□ 1.18
CDHR3-207ENST00000470188 PODNQ7Z5L7 613 aa22.4■■□□□ 1.18
CDHR3-207ENST00000470188 ZFPM1Q8IX07 1006 aa22.4■■□□□ 1.18
CDHR3-207ENST00000470188 AKT1S1Q96B36 256 aa22.4■■□□□ 1.18
CDHR3-207ENST00000470188 ZDHHC15Q96MV8 337 aa22.4■■□□□ 1.18
CDHR3-207ENST00000470188 CHP1Q99653 195 aa22.4■■□□□ 1.18
CDHR3-207ENST00000470188 ANKZF1Q9H8Y5 726 aa22.4■■□□□ 1.18
CDHR3-207ENST00000470188 SLC39A2Q9NP94 309 aa22.4■■□□□ 1.18
CDHR3-207ENST00000470188 MTIF2P46199 727 aaKnown RBP22.39■■□□□ 1.18
CDHR3-207ENST00000470188 TSR1Q2NL82 804 aaKnown RBP22.39■■□□□ 1.18
CDHR3-207ENST00000470188 UNC13DQ70J99 1090 aa22.39■■□□□ 1.18
CDHR3-207ENST00000470188 MTMR8Q96EF0 704 aa22.39■■□□□ 1.18
CDHR3-207ENST00000470188 DDX25Q9UHL0 483 aaKnown RBP22.39■■□□□ 1.18
CDHR3-207ENST00000470188 COL11A2P13942 1736 aaPredicted RBP22.39■■□□□ 1.17
CDHR3-207ENST00000470188 PVALEFA0A1B0GWK0 134 aa22.39■■□□□ 1.17
CDHR3-207ENST00000470188 RAD54LQ92698 747 aa22.39■■□□□ 1.17
CDHR3-207ENST00000470188 ZNF622Q969S3 477 aaKnown RBP eCLIP22.39■■□□□ 1.17
CDHR3-207ENST00000470188 DNAJC18Q9H819 358 aa22.39■■□□□ 1.17
CDHR3-207ENST00000470188 PSTPIP2Q9H939 334 aa22.39■■□□□ 1.17
CDHR3-207ENST00000470188 KCNQ5Q9NR82 932 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms