RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 DAGLBQ8NCG7 672 aa16.96■□□□□ 0.31
COL9A3-209ENST00000469852 IL31RAQ8NI17 732 aa16.96■□□□□ 0.31
COL9A3-209ENST00000469852 RAET1EQ8TD07 263 aa16.96■□□□□ 0.31
COL9A3-209ENST00000469852 MAF1Q9H063 256 aa16.96■□□□□ 0.31
COL9A3-209ENST00000469852 MAP3K20Q9NYL2 800 aaKnown RBP16.96■□□□□ 0.31
COL9A3-209ENST00000469852 ADCY3O60266 1144 aa16.95■□□□□ 0.3
COL9A3-209ENST00000469852 XRCC5P13010 732 aaKnown RBP16.95■□□□□ 0.3
COL9A3-209ENST00000469852 EIF2AK2P19525 551 aaKnown RBP16.95■□□□□ 0.3
COL9A3-209ENST00000469852 GNA11P29992 359 aa16.95■□□□□ 0.3
COL9A3-209ENST00000469852 NR5A1Q13285 461 aa16.95■□□□□ 0.3
COL9A3-209ENST00000469852 EARS2Q5JPH6 523 aaKnown RBP16.95■□□□□ 0.3
COL9A3-209ENST00000469852 BLIDQ8IZY5 108 aa16.95■□□□□ 0.3
COL9A3-209ENST00000469852 REXO1Q8N1G1 1221 aaKnown RBP16.95■□□□□ 0.3
COL9A3-209ENST00000469852 SAMD3Q8N6K7 520 aa16.95■□□□□ 0.3
COL9A3-209ENST00000469852 FBXO18Q8NFZ0 1043 aa16.95■□□□□ 0.3
COL9A3-209ENST00000469852 ZFP91Q96JP5 570 aaPredicted RBP16.95■□□□□ 0.3
COL9A3-209ENST00000469852 RMDN3Q96TC7 470 aa16.95■□□□□ 0.3
COL9A3-209ENST00000469852 PXMP2Q9NR77 195 aa16.95■□□□□ 0.3
COL9A3-209ENST00000469852 PCDHA6Q9UN73 950 aa16.95■□□□□ 0.3
COL9A3-209ENST00000469852 DIS3Q9Y2L1 958 aaKnown RBP16.95■□□□□ 0.3
COL9A3-209ENST00000469852 PCDHA8Q9Y5H6 950 aa16.95■□□□□ 0.3
COL9A3-209ENST00000469852 MYH7BA7E2Y1 1941 aa16.95■□□□□ 0.3
COL9A3-209ENST00000469852 FRMPD4Q14CM0 1322 aa16.95■□□□□ 0.3
COL9A3-209ENST00000469852 RPTORQ8N122 1335 aa16.95■□□□□ 0.3
COL9A3-209ENST00000469852 FAM205CA6NFA0 338 aa16.94■□□□□ 0.3
COL9A3-209ENST00000469852 XBP1P17861 261 aa16.94■□□□□ 0.3
COL9A3-209ENST00000469852 CYP2C19P33261 490 aa16.94■□□□□ 0.3
COL9A3-209ENST00000469852 PRMT2P55345 433 aa16.94■□□□□ 0.3
COL9A3-209ENST00000469852 BECN1Q14457 450 aa16.94■□□□□ 0.3
COL9A3-209ENST00000469852 PKN2Q16513 984 aaKnown RBP16.94■□□□□ 0.3
COL9A3-209ENST00000469852 FAM177A1Q8N128 213 aaPredicted RBP16.94■□□□□ 0.3
COL9A3-209ENST00000469852 DNERQ8NFT8 737 aa16.94■□□□□ 0.3
COL9A3-209ENST00000469852 TNFRSF25Q93038 417 aa16.94■□□□□ 0.3
COL9A3-209ENST00000469852 ANO3Q9BYT9 981 aa16.94■□□□□ 0.3
COL9A3-209ENST00000469852 BTBD18B2RXH4 712 aa16.93■□□□□ 0.3
COL9A3-209ENST00000469852 KIF28PB7ZC32 967 aa16.93■□□□□ 0.3
COL9A3-209ENST00000469852 SNAI1O95863 264 aaPredicted RBP16.93■□□□□ 0.3
COL9A3-209ENST00000469852 HSP90AA1P07900 732 aaKnown RBP16.93■□□□□ 0.3
COL9A3-209ENST00000469852 EDNRBP24530 442 aa16.93■□□□□ 0.3
COL9A3-209ENST00000469852 TRIM29Q14134 588 aa16.93■□□□□ 0.3
COL9A3-209ENST00000469852 PGM5Q15124 567 aa16.93■□□□□ 0.3
COL9A3-209ENST00000469852 ARHGEF16Q5VV41 709 aa16.93■□□□□ 0.3
COL9A3-209ENST00000469852 LARP1BQ659C4 914 aaKnown RBP16.93■□□□□ 0.3
COL9A3-209ENST00000469852 OLFML2BQ68BL8 750 aa16.93■□□□□ 0.3
COL9A3-209ENST00000469852 MAMDC4Q6UXC1 1216 aa16.93■□□□□ 0.3
COL9A3-209ENST00000469852 ARMCX2Q7L311 632 aa16.93■□□□□ 0.3
COL9A3-209ENST00000469852 ZNF467Q7Z7K2 595 aaPredicted RBP16.93■□□□□ 0.3
COL9A3-209ENST00000469852 DIS3L2Q8IYB7 885 aaKnown RBP16.93■□□□□ 0.3
COL9A3-209ENST00000469852 NSUN6Q8TEA1 469 aaKnown RBP16.93■□□□□ 0.3
COL9A3-209ENST00000469852 SH3TC2Q8TF17 1288 aa16.93■□□□□ 0.3
COL9A3-209ENST00000469852 PDCD2LQ9BRP1 358 aa16.93■□□□□ 0.3
COL9A3-209ENST00000469852 TINF2Q9BSI4 451 aa16.93■□□□□ 0.3
COL9A3-209ENST00000469852 GLT8D2Q9H1C3 349 aa16.93■□□□□ 0.3
COL9A3-209ENST00000469852 SLC5A4Q9NY91 659 aa16.93■□□□□ 0.3
COL9A3-209ENST00000469852 PDE4DIPQ5VU43 2346 aa16.92■□□□□ 0.3
COL9A3-209ENST00000469852 SPDYE3A6NKU9 549 aa16.92■□□□□ 0.3
COL9A3-209ENST00000469852 EDIL3O43854 480 aa16.92■□□□□ 0.3
COL9A3-209ENST00000469852 KRT2P35908 639 aa16.92■□□□□ 0.3
COL9A3-209ENST00000469852 ANP32AP39687 249 aaKnown RBP16.92■□□□□ 0.3
COL9A3-209ENST00000469852 AP3B2Q13367 1082 aa16.92■□□□□ 0.3
COL9A3-209ENST00000469852 PRAMEF19Q5SWL8 479 aa16.92■□□□□ 0.3
COL9A3-209ENST00000469852 GALNT17Q6IS24 598 aa16.92■□□□□ 0.3
COL9A3-209ENST00000469852 BICD2Q8TD16 824 aa16.92■□□□□ 0.3
COL9A3-209ENST00000469852 MORC4Q8TE76 937 aa16.92■□□□□ 0.3
COL9A3-209ENST00000469852 KATNBL1Q9H079 304 aa16.92■□□□□ 0.3
COL9A3-209ENST00000469852 ADD3Q9UEY8 706 aaKnown RBP16.92■□□□□ 0.3
COL9A3-209ENST00000469852 KIF3AQ9Y496 699 aa16.92■□□□□ 0.3
COL9A3-209ENST00000469852 NR3C2P08235 984 aa16.91■□□□□ 0.3
COL9A3-209ENST00000469852 SYT1P21579 422 aa16.91■□□□□ 0.3
COL9A3-209ENST00000469852 GRK4P32298 578 aa16.91■□□□□ 0.3
COL9A3-209ENST00000469852 MRPS9P82933 396 aaKnown RBP16.91■□□□□ 0.3
COL9A3-209ENST00000469852 FBXO46Q6PJ61 603 aaPredicted RBP16.91■□□□□ 0.3
COL9A3-209ENST00000469852 EEPD1Q7L9B9 569 aa16.91■□□□□ 0.3
COL9A3-209ENST00000469852 SLAIN1Q8ND83 568 aa16.91■□□□□ 0.3
COL9A3-209ENST00000469852 TRPV1Q8NER1 839 aa16.91■□□□□ 0.3
COL9A3-209ENST00000469852 PXYLP1Q8TE99 480 aa16.91■□□□□ 0.3
COL9A3-209ENST00000469852 CRYGNQ8WXF5 182 aa16.91■□□□□ 0.3
COL9A3-209ENST00000469852 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.91■□□□□ 0.3
COL9A3-209ENST00000469852 SYNGAP1Q96PV0 1343 aa16.91■□□□□ 0.3
COL9A3-209ENST00000469852 KIAA1217Q5T5P2 1943 aa16.9■□□□□ 0.3
COL9A3-209ENST00000469852 ASB14A6NK59 587 aa16.9■□□□□ 0.3
COL9A3-209ENST00000469852 FOSP01100 380 aaPredicted RBP16.9■□□□□ 0.3
COL9A3-209ENST00000469852 HMGCRP04035 888 aa16.9■□□□□ 0.3
COL9A3-209ENST00000469852 INHAP05111 366 aa16.9■□□□□ 0.3
COL9A3-209ENST00000469852 MYCLP12524 364 aaPredicted RBP16.9■□□□□ 0.3
COL9A3-209ENST00000469852 SREBF1P36956 1147 aa16.9■□□□□ 0.3
COL9A3-209ENST00000469852 CACNB2Q08289 660 aaPredicted RBP16.9■□□□□ 0.3
COL9A3-209ENST00000469852 PIK3AP1Q6ZUJ8 805 aa16.9■□□□□ 0.3
COL9A3-209ENST00000469852 TEX2Q8IWB9 1127 aa16.9■□□□□ 0.3
COL9A3-209ENST00000469852 FBXO16Q8IX29 292 aaPredicted RBP16.9■□□□□ 0.3
COL9A3-209ENST00000469852 VPS37CA5D8V6 355 aaPredicted RBP16.89■□□□□ 0.29
COL9A3-209ENST00000469852 H3BQV1 296 aa16.89■□□□□ 0.29
COL9A3-209ENST00000469852 RGS20O76081 388 aa16.89■□□□□ 0.29
COL9A3-209ENST00000469852 ARHGAP4P98171 946 aa16.89■□□□□ 0.29
COL9A3-209ENST00000469852 PDE4DQ08499 809 aa16.89■□□□□ 0.29
COL9A3-209ENST00000469852 PKP1Q13835 747 aa16.89■□□□□ 0.29
COL9A3-209ENST00000469852 MAP3K21Q5TCX8 1036 aa16.89■□□□□ 0.29
COL9A3-209ENST00000469852 VSIG10LQ86VR7 867 aa16.89■□□□□ 0.29
COL9A3-209ENST00000469852 TRMT44Q8IYL2 757 aaKnown RBP16.89■□□□□ 0.29
COL9A3-209ENST00000469852 MSL3Q8N5Y2 521 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms