RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 ASGR1P07306 291 aa20.33■□□□□ 0.85
MRPL28-208ENST00000469744 RPS6KB1P23443 525 aa20.33■□□□□ 0.85
MRPL28-208ENST00000469744 CST5P28325 142 aaPredicted RBP20.33■□□□□ 0.85
MRPL28-208ENST00000469744 PKP1Q13835 747 aa20.33■□□□□ 0.85
MRPL28-208ENST00000469744 TMEM67Q5HYA8 995 aa20.33■□□□□ 0.85
MRPL28-208ENST00000469744 TLK2Q86UE8 772 aa20.33■□□□□ 0.85
MRPL28-208ENST00000469744 FBXO11Q86XK2 927 aa20.33■□□□□ 0.85
MRPL28-208ENST00000469744 LBHD1Q9BQE6 289 aaPredicted RBP20.33■□□□□ 0.85
MRPL28-208ENST00000469744 PDLIM7Q9NR12 457 aa20.33■□□□□ 0.85
MRPL28-208ENST00000469744 GNEQ9Y223 722 aaKnown RBP20.33■□□□□ 0.85
MRPL28-208ENST00000469744 ABCB11O95342 1321 aa20.33■□□□□ 0.84
MRPL28-208ENST00000469744 MOXD2PA6NHM9 499 aa20.32■□□□□ 0.84
MRPL28-208ENST00000469744 SART3Q15020 963 aaKnown RBP20.32■□□□□ 0.84
MRPL28-208ENST00000469744 SLC35G1Q2M3R5 365 aa20.32■□□□□ 0.84
MRPL28-208ENST00000469744 C1orf53Q5VUE5 145 aa20.32■□□□□ 0.84
MRPL28-208ENST00000469744 NUP133Q8WUM0 1156 aa20.32■□□□□ 0.84
MRPL28-208ENST00000469744 VTA1Q9NP79 307 aa20.32■□□□□ 0.84
MRPL28-208ENST00000469744 LAMA2P24043 3122 aaKnown RBP20.32■□□□□ 0.84
MRPL28-208ENST00000469744 TRIM43BA6NCK2 446 aa20.31■□□□□ 0.84
MRPL28-208ENST00000469744 PALM3A6NDB9 673 aaPredicted RBP20.31■□□□□ 0.84
MRPL28-208ENST00000469744 DYNC1LI2O43237 492 aaPredicted RBP20.31■□□□□ 0.84
MRPL28-208ENST00000469744 PPP1R11O60927 126 aaPredicted RBP20.31■□□□□ 0.84
MRPL28-208ENST00000469744 GRM4Q14833 912 aa20.31■□□□□ 0.84
MRPL28-208ENST00000469744 KLHL40Q2TBA0 621 aa20.31■□□□□ 0.84
MRPL28-208ENST00000469744 PCSK9Q8NBP7 692 aaKnown RBP20.31■□□□□ 0.84
MRPL28-208ENST00000469744 VTI1AQ96AJ9 217 aa20.31■□□□□ 0.84
MRPL28-208ENST00000469744 TRIM43Q96BQ3 446 aaPredicted RBP20.31■□□□□ 0.84
MRPL28-208ENST00000469744 LRCH3Q96II8 777 aa20.31■□□□□ 0.84
MRPL28-208ENST00000469744 PDE4DQ08499 809 aa20.3■□□□□ 0.84
MRPL28-208ENST00000469744 IQSEC1Q6DN90 963 aa20.3■□□□□ 0.84
MRPL28-208ENST00000469744 HOMER1Q86YM7 354 aa20.3■□□□□ 0.84
MRPL28-208ENST00000469744 TDHQ8IZJ6 230 aa20.3■□□□□ 0.84
MRPL28-208ENST00000469744 IGDCC4Q8TDY8 1250 aa20.3■□□□□ 0.84
MRPL28-208ENST00000469744 GLT1D1Q96MS3 346 aa20.3■□□□□ 0.84
MRPL28-208ENST00000469744 MYL10Q9BUA6 226 aa20.3■□□□□ 0.84
MRPL28-208ENST00000469744 AP5M1Q9H0R1 490 aa20.3■□□□□ 0.84
MRPL28-208ENST00000469744 COL20A1Q9P218 1284 aa20.3■□□□□ 0.84
MRPL28-208ENST00000469744 FSD2A1L4K1 749 aa20.3■□□□□ 0.84
MRPL28-208ENST00000469744 HMGB1P09429 215 aaKnown RBP20.3■□□□□ 0.84
MRPL28-208ENST00000469744 TROAPQ12815 778 aa20.3■□□□□ 0.84
MRPL28-208ENST00000469744 FSCN1Q16658 493 aaKnown RBP20.3■□□□□ 0.84
MRPL28-208ENST00000469744 WDR11Q9BZH6 1224 aa20.3■□□□□ 0.84
MRPL28-208ENST00000469744 LMBRD1Q9NUN5 540 aa20.3■□□□□ 0.84
MRPL28-208ENST00000469744 PRC1O43663 620 aa20.29■□□□□ 0.84
MRPL28-208ENST00000469744 CLTBP09497 229 aa20.29■□□□□ 0.84
MRPL28-208ENST00000469744 MCTP1Q6DN14 999 aa20.29■□□□□ 0.84
MRPL28-208ENST00000469744 CXCL17Q6UXB2 119 aa20.29■□□□□ 0.84
MRPL28-208ENST00000469744 CATIPQ7Z7H3 387 aa20.29■□□□□ 0.84
MRPL28-208ENST00000469744 RGS22Q8NE09 1264 aa20.29■□□□□ 0.84
MRPL28-208ENST00000469744 DNERQ8NFT8 737 aa20.29■□□□□ 0.84
MRPL28-208ENST00000469744 SYTL5Q8TDW5 730 aaPredicted RBP20.29■□□□□ 0.84
MRPL28-208ENST00000469744 BADQ92934 168 aa20.29■□□□□ 0.84
MRPL28-208ENST00000469744 MTMR8Q96EF0 704 aa20.29■□□□□ 0.84
MRPL28-208ENST00000469744 NEK1Q96PY6 1258 aa20.29■□□□□ 0.84
MRPL28-208ENST00000469744 TAAR1Q96RJ0 339 aa20.29■□□□□ 0.84
MRPL28-208ENST00000469744 LY9Q9HBG7 655 aa20.29■□□□□ 0.84
MRPL28-208ENST00000469744 SMC3Q9UQE7 1217 aa20.29■□□□□ 0.84
MRPL28-208ENST00000469744 MRPL11Q9Y3B7 192 aaKnown RBP20.29■□□□□ 0.84
MRPL28-208ENST00000469744 OPLAHO14841 1288 aa20.28■□□□□ 0.84
MRPL28-208ENST00000469744 CPA1P15085 419 aa20.28■□□□□ 0.84
MRPL28-208ENST00000469744 EDNRBP24530 442 aa20.28■□□□□ 0.84
MRPL28-208ENST00000469744 ITGB8P26012 769 aa20.28■□□□□ 0.84
MRPL28-208ENST00000469744 PIBF1Q8WXW3 757 aa20.28■□□□□ 0.84
MRPL28-208ENST00000469744 PIGSQ96S52 555 aa20.28■□□□□ 0.84
MRPL28-208ENST00000469744 AMNQ9BXJ7 453 aa20.28■□□□□ 0.84
MRPL28-208ENST00000469744 ELP1O95163 1332 aa20.27■□□□□ 0.84
MRPL28-208ENST00000469744 LOC102724159A0A0B4J2E5 919 aa20.27■□□□□ 0.84
MRPL28-208ENST00000469744 ZBTB5O15062 677 aa20.27■□□□□ 0.84
MRPL28-208ENST00000469744 CYTH3O43739 400 aa20.27■□□□□ 0.84
MRPL28-208ENST00000469744 CFBP00751 764 aa20.27■□□□□ 0.84
MRPL28-208ENST00000469744 NKX3-2P78367 333 aa20.27■□□□□ 0.84
MRPL28-208ENST00000469744 PWP2Q15269 919 aaKnown RBP20.27■□□□□ 0.84
MRPL28-208ENST00000469744 DUSP28Q4G0W2 176 aa20.27■□□□□ 0.84
MRPL28-208ENST00000469744 MCF2L2Q86YR7 1114 aa20.27■□□□□ 0.84
MRPL28-208ENST00000469744 ZNF654Q8IZM8 581 aa20.27■□□□□ 0.84
MRPL28-208ENST00000469744 LRRC2Q9BYS8 371 aa20.27■□□□□ 0.84
MRPL28-208ENST00000469744 PCDHA1Q9Y5I3 950 aa20.27■□□□□ 0.84
MRPL28-208ENST00000469744 MCM5P33992 734 aa20.26■□□□□ 0.83
MRPL28-208ENST00000469744 FAAP100Q0VG06 881 aa20.26■□□□□ 0.83
MRPL28-208ENST00000469744 ANKRD33Q7Z3H0 272 aa20.26■□□□□ 0.83
MRPL28-208ENST00000469744 MPHOSPH6Q99547 160 aaKnown RBP20.26■□□□□ 0.83
MRPL28-208ENST00000469744 RIOX1Q9H6W3 641 aa20.26■□□□□ 0.83
MRPL28-208ENST00000469744 TMEM39AQ9NV64 488 aa20.26■□□□□ 0.83
MRPL28-208ENST00000469744 A0A0U1RQG5 324 aaPredicted RBP20.25■□□□□ 0.83
MRPL28-208ENST00000469744 GOLGA6L3A6NEY3 463 aa20.25■□□□□ 0.83
MRPL28-208ENST00000469744 DCDC2CA8MYV0 355 aa20.25■□□□□ 0.83
MRPL28-208ENST00000469744 SH2B2O14492 632 aaPredicted RBP20.25■□□□□ 0.83
MRPL28-208ENST00000469744 EIF2AK2P19525 551 aaKnown RBP20.25■□□□□ 0.83
MRPL28-208ENST00000469744 ME3Q16798 604 aa20.25■□□□□ 0.83
MRPL28-208ENST00000469744 NFXL1Q6ZNB6 911 aa20.25■□□□□ 0.83
MRPL28-208ENST00000469744 RAB11FIP4Q86YS3 637 aa20.25■□□□□ 0.83
MRPL28-208ENST00000469744 COPS5Q92905 334 aa20.25■□□□□ 0.83
MRPL28-208ENST00000469744 RMDN3Q96TC7 470 aa20.25■□□□□ 0.83
MRPL28-208ENST00000469744 TPCN1Q9ULQ1 816 aa20.25■□□□□ 0.83
MRPL28-208ENST00000469744 KIAA1217Q5T5P2 1943 aa20.25■□□□□ 0.83
MRPL28-208ENST00000469744 RBM47A0AV96 593 aaKnown RBP20.24■□□□□ 0.83
MRPL28-208ENST00000469744 ARVCFO00192 962 aa20.24■□□□□ 0.83
MRPL28-208ENST00000469744 ARIH2O95376 493 aa20.24■□□□□ 0.83
MRPL28-208ENST00000469744 RXRAP19793 462 aa20.24■□□□□ 0.83
MRPL28-208ENST00000469744 HOXA13P31271 388 aaPredicted RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms