RNA–Protein interactions for RNA: ENST00000469641.5

ATP13A1-205, Transcript of ATPase 13A1, human

TSL 2

Gene ATP13A1, Length 4,241 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP13A1-205	ENST00000469641	CACNA2D3	Q8IZS8	1091 aa		11.64	□□□□□ -0.55
ATP13A1-205	ENST00000469641	L2HGDH	Q9H9P8	463 aa		11.64	□□□□□ -0.55
ATP13A1-205	ENST00000469641	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	11.64	□□□□□ -0.55
ATP13A1-205	ENST00000469641	DLG5	Q8TDM6	1919 aa		11.64	□□□□□ -0.55
ATP13A1-205	ENST00000469641	GOLGA8K	D6RF30	607 aa		11.64	□□□□□ -0.55
ATP13A1-205	ENST00000469641	TADA3	O75528	432 aa		11.64	□□□□□ -0.55
ATP13A1-205	ENST00000469641	MTF1	Q14872	753 aa		11.64	□□□□□ -0.55
ATP13A1-205	ENST00000469641	NONO	Q15233	471 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
ATP13A1-205	ENST00000469641	CCDC170	Q8IYT3	715 aa		11.64	□□□□□ -0.55
ATP13A1-205	ENST00000469641	BLID	Q8IZY5	108 aa		11.64	□□□□□ -0.55
ATP13A1-205	ENST00000469641	PLA2G12B	Q9BX93	195 aa		11.64	□□□□□ -0.55
ATP13A1-205	ENST00000469641	EHMT1	Q9H9B1	1298 aa		11.64	□□□□□ -0.55
ATP13A1-205	ENST00000469641	DCC	P43146	1447 aa		11.63	□□□□□ -0.55
ATP13A1-205	ENST00000469641	ABCB5	Q2M3G0	1257 aa		11.63	□□□□□ -0.55
ATP13A1-205	ENST00000469641	SLC51A	Q86UW1	340 aa		11.63	□□□□□ -0.55
ATP13A1-205	ENST00000469641	RASAL2	Q9UJF2	1139 aa		11.63	□□□□□ -0.55
ATP13A1-205	ENST00000469641	STK38L	Q9Y2H1	464 aa		11.63	□□□□□ -0.55
ATP13A1-205	ENST00000469641	CCDC160	A6NGH7	325 aa		11.63	□□□□□ -0.55
ATP13A1-205	ENST00000469641	MAP3K9	P80192	1104 aa		11.63	□□□□□ -0.55
ATP13A1-205	ENST00000469641	CYP4A11	Q02928	519 aa		11.63	□□□□□ -0.55
ATP13A1-205	ENST00000469641	MKRN3	Q13064	507 aa	Known RBP	11.63	□□□□□ -0.55
ATP13A1-205	ENST00000469641	SV2B	Q7L1I2	683 aa		11.63	□□□□□ -0.55
ATP13A1-205	ENST00000469641	PCDHA1	Q9Y5I3	950 aa		11.63	□□□□□ -0.55
ATP13A1-205	ENST00000469641	FMNL1	O95466	1100 aa	Predicted RBP	11.63	□□□□□ -0.55
ATP13A1-205	ENST00000469641	ALAS1	P13196	640 aa		11.63	□□□□□ -0.55
ATP13A1-205	ENST00000469641	HOOK3	Q86VS8	718 aa		11.63	□□□□□ -0.55
ATP13A1-205	ENST00000469641	ARHGEF10L	Q9HCE6	1279 aa		11.63	□□□□□ -0.55
ATP13A1-205	ENST00000469641	PICK1	Q9NRD5	415 aa		11.63	□□□□□ -0.55
ATP13A1-205	ENST00000469641	BCL9	O00512	1426 aa		11.63	□□□□□ -0.55
ATP13A1-205	ENST00000469641	SEMA3E	O15041	775 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	ECE2	O60344	883 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	SLURP2	P0DP57	97 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	CTNNA1	P35221	906 aa	Known RBP	11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	ADCY7	P51828	1080 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	STAG2	Q8N3U4	1231 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	N4BP2L2	Q92802	583 aa	Predicted RBP	11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	NUP58	Q9BVL2	599 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	STMN4	Q9H169	189 aa	Predicted RBP	11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	FOXP1	Q9H334	677 aa	Predicted RBP	11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	LRWD1	Q9UFC0	647 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	FAM169A	Q9Y6X4	670 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	BUB1	O43683	1085 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	GH2	P01242	217 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	MMP1	P03956	469 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	IFNAR1	P17181	557 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	CRK	P46108	304 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	ATP11A	P98196	1134 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	CYP27A1	Q02318	531 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	UBE2S	Q16763	222 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	ADGRA1	Q86SQ6	560 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	SNX29	Q8TEQ0	813 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	BRIP1	Q9BX63	1249 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	LRRC27	Q9C0I9	530 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	TEX33	O43247	280 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	CXCR5	P32302	372 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	GUCY2D	Q02846	1103 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	NEDD9	Q14511	834 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	SLC27A3	Q5K4L6	730 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	NELFCD	Q8IXH7	590 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	CCDC26	Q8TAB7	109 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	LMBR1	Q8WVP7	490 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	CEP95	Q96GE4	821 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	IFT74	Q96LB3	600 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	FAM205C	A6NFA0	338 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	TBCA	O75347	108 aa	Known RBP	11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	SETDB1	Q15047	1291 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	PPP2R5B	Q15173	497 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	SNCB	Q16143	134 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	PRR16	Q569H4	304 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	DCAF17	Q5H9S7	520 aa	Predicted RBP	11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	INTS8	Q75QN2	995 aa	Known RBP	11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	TRIM58	Q8NG06	486 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	GSDMA	Q96QA5	445 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	PAGR1	Q9BTK6	254 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	COA1	Q9GZY4	146 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	PSTPIP2	Q9H939	334 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	LY9	Q9HBG7	655 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	MTRF1L	Q9UGC7	380 aa	Known RBP	11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	SWAP70	Q9UH65	585 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	TUBE1	Q9UJT0	475 aa		11.62	□□□□□ -0.55
ATP13A1-205	ENST00000469641	BACH1	O14867	736 aa		11.61	□□□□□ -0.55
ATP13A1-205	ENST00000469641	ADRA2B	P18089	450 aa		11.61	□□□□□ -0.55
ATP13A1-205	ENST00000469641	C6orf163	Q5TEZ5	329 aa		11.61	□□□□□ -0.55
ATP13A1-205	ENST00000469641	GKAP1	Q5VSY0	366 aa	Predicted RBP	11.61	□□□□□ -0.55
ATP13A1-205	ENST00000469641	CNKSR2	Q8WXI2	1034 aa		11.61	□□□□□ -0.55
ATP13A1-205	ENST00000469641	GINS2	Q9Y248	185 aa		11.61	□□□□□ -0.55
ATP13A1-205	ENST00000469641	USP17L5	A8MUK1	530 aa		11.61	□□□□□ -0.55
ATP13A1-205	ENST00000469641		B4DLN1	442 aa		11.61	□□□□□ -0.55
ATP13A1-205	ENST00000469641	RPN1	P04843	607 aa	Known RBP	11.61	□□□□□ -0.55
ATP13A1-205	ENST00000469641	PDCL	Q13371	301 aa		11.61	□□□□□ -0.55
ATP13A1-205	ENST00000469641	RC3H1	Q5TC82	1133 aa	Known RBP	11.61	□□□□□ -0.55
ATP13A1-205	ENST00000469641	TRIM68	Q6AZZ1	485 aa		11.61	□□□□□ -0.55
ATP13A1-205	ENST00000469641	DAAM2	Q86T65	1068 aa		11.61	□□□□□ -0.55
ATP13A1-205	ENST00000469641	METTL16	Q86W50	562 aa	Known RBP	11.61	□□□□□ -0.55
ATP13A1-205	ENST00000469641	TCP11	Q8WWU5	503 aa		11.61	□□□□□ -0.55
ATP13A1-205	ENST00000469641	ABCC12	Q96J65	1359 aa		11.61	□□□□□ -0.55
ATP13A1-205	ENST00000469641	WDR19	Q8NEZ3	1342 aa		11.61	□□□□□ -0.55
ATP13A1-205	ENST00000469641	PTPRE	P23469	700 aa		11.61	□□□□□ -0.55
ATP13A1-205	ENST00000469641	HOXA13	P31271	388 aa	Predicted RBP	11.61	□□□□□ -0.55
ATP13A1-205	ENST00000469641	LIFR	P42702	1097 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms