RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 SYNRGQ9UMZ2 1314 aa10.74□□□□□ -0.69
HDAC3-205ENST00000469550 POTEFA5A3E0 1075 aa10.74□□□□□ -0.69
HDAC3-205ENST00000469550 BTBD18B2RXH4 712 aa10.74□□□□□ -0.69
HDAC3-205ENST00000469550 PRPF6O94906 941 aaKnown RBP10.74□□□□□ -0.69
HDAC3-205ENST00000469550 GUCY2CP25092 1073 aa10.74□□□□□ -0.69
HDAC3-205ENST00000469550 GTF2A1P52655 376 aaPredicted RBP10.74□□□□□ -0.69
HDAC3-205ENST00000469550 CACNB3P54284 484 aa10.74□□□□□ -0.69
HDAC3-205ENST00000469550 USP14P54578 494 aa10.74□□□□□ -0.69
HDAC3-205ENST00000469550 GRIN1Q05586 938 aa10.74□□□□□ -0.69
HDAC3-205ENST00000469550 SPAG1Q07617 926 aa10.74□□□□□ -0.69
HDAC3-205ENST00000469550 SNAPC2Q13487 334 aa10.74□□□□□ -0.69
HDAC3-205ENST00000469550 TTF1Q15361 905 aaPredicted RBP10.74□□□□□ -0.69
HDAC3-205ENST00000469550 SPECC1Q5M775 1068 aa10.74□□□□□ -0.69
HDAC3-205ENST00000469550 ZNF662Q6ZS27 426 aa10.74□□□□□ -0.69
HDAC3-205ENST00000469550 MICU3Q86XE3 530 aa10.74□□□□□ -0.69
HDAC3-205ENST00000469550 DIS3L2Q8IYB7 885 aaKnown RBP10.74□□□□□ -0.69
HDAC3-205ENST00000469550 AFAP1L1Q8TED9 768 aa10.74□□□□□ -0.69
HDAC3-205ENST00000469550 FAM151AQ8WW52 585 aa10.74□□□□□ -0.69
HDAC3-205ENST00000469550 WRNIP1Q96S55 665 aa10.74□□□□□ -0.69
HDAC3-205ENST00000469550 ZNF341Q9BYN7 854 aa10.74□□□□□ -0.69
HDAC3-205ENST00000469550 FAM204AQ9H8W3 233 aa10.74□□□□□ -0.69
HDAC3-205ENST00000469550 GEMIN8Q9NWZ8 242 aaKnown RBP10.74□□□□□ -0.69
HDAC3-205ENST00000469550 AATFQ9NY61 560 aaKnown RBP eCLIP10.74□□□□□ -0.69
HDAC3-205ENST00000469550 ZNF112Q9UJU3 913 aa10.74□□□□□ -0.69
HDAC3-205ENST00000469550 JRKLQ9Y4A0 524 aa10.74□□□□□ -0.69
HDAC3-205ENST00000469550 ZSWIM8A7E2V4 1837 aa10.73□□□□□ -0.69
HDAC3-205ENST00000469550 A0A0U1RQJ8 604 aa10.73□□□□□ -0.69
HDAC3-205ENST00000469550 TLR2O60603 784 aa10.73□□□□□ -0.69
HDAC3-205ENST00000469550 SYF2O95926 243 aaKnown RBP10.73□□□□□ -0.69
HDAC3-205ENST00000469550 GNRH1P01148 92 aa10.73□□□□□ -0.69
HDAC3-205ENST00000469550 ADORA1P30542 326 aa10.73□□□□□ -0.69
HDAC3-205ENST00000469550 FXR1P51114 621 aaKnown RBP eCLIP10.73□□□□□ -0.69
HDAC3-205ENST00000469550 RCAN1P53805 252 aa10.73□□□□□ -0.69
HDAC3-205ENST00000469550 PPATQ06203 517 aa10.73□□□□□ -0.69
HDAC3-205ENST00000469550 MAPK8IP2Q13387 824 aaPredicted RBP10.73□□□□□ -0.69
HDAC3-205ENST00000469550 DNAJC21Q5F1R6 531 aaKnown RBP10.73□□□□□ -0.69
HDAC3-205ENST00000469550 NOL9Q5SY16 702 aaKnown RBP10.73□□□□□ -0.69
HDAC3-205ENST00000469550 FOXR1Q6PIV2 292 aa10.73□□□□□ -0.69
HDAC3-205ENST00000469550 PACS2Q86VP3 889 aa10.73□□□□□ -0.69
HDAC3-205ENST00000469550 SUGP1Q8IWZ8 645 aaKnown RBP10.73□□□□□ -0.69
HDAC3-205ENST00000469550 TRIM22Q8IYM9 498 aa10.73□□□□□ -0.69
HDAC3-205ENST00000469550 ATRIPQ8WXE1 791 aa10.73□□□□□ -0.69
HDAC3-205ENST00000469550 ZNF333Q96JL9 665 aa10.73□□□□□ -0.69
HDAC3-205ENST00000469550 SLC26A6Q9BXS9 759 aa10.73□□□□□ -0.69
HDAC3-205ENST00000469550 ABHD10Q9NUJ1 306 aa10.73□□□□□ -0.69
HDAC3-205ENST00000469550 DAGLAQ9Y4D2 1042 aa10.73□□□□□ -0.69
HDAC3-205ENST00000469550 SLC12A7Q9Y666 1083 aa10.73□□□□□ -0.69
HDAC3-205ENST00000469550 PDS5AQ29RF7 1337 aaKnown RBP10.73□□□□□ -0.69
HDAC3-205ENST00000469550 MYH7P12883 1935 aa10.73□□□□□ -0.69
HDAC3-205ENST00000469550 MYH2Q9UKX2 1941 aa10.72□□□□□ -0.69
HDAC3-205ENST00000469550 A0A087WUV0 522 aaPredicted RBP10.72□□□□□ -0.69
HDAC3-205ENST00000469550 PPP1R3GB7ZBB8 358 aa10.72□□□□□ -0.69
HDAC3-205ENST00000469550 SHOX2O60902 331 aaPredicted RBP10.72□□□□□ -0.69
HDAC3-205ENST00000469550 RNF40O75150 1001 aa10.72□□□□□ -0.69
HDAC3-205ENST00000469550 ERVK-24P63145 666 aa10.72□□□□□ -0.69
HDAC3-205ENST00000469550 TMEM67Q5HYA8 995 aa10.72□□□□□ -0.69
HDAC3-205ENST00000469550 NFXL1Q6ZNB6 911 aa10.72□□□□□ -0.69
HDAC3-205ENST00000469550 TRAPPC11Q7Z392 1133 aa10.72□□□□□ -0.69
HDAC3-205ENST00000469550 NOA1Q8NC60 698 aaKnown RBP10.72□□□□□ -0.69
HDAC3-205ENST00000469550 CPLX3Q8WVH0 158 aa10.72□□□□□ -0.69
HDAC3-205ENST00000469550 KCNH4Q9UQ05 1017 aa10.72□□□□□ -0.69
HDAC3-205ENST00000469550 ADGRA2Q96PE1 1338 aa10.72□□□□□ -0.69
HDAC3-205ENST00000469550 B4E1Z4 1266 aa10.72□□□□□ -0.69
HDAC3-205ENST00000469550 BTBD19C9JJ37 291 aa10.72□□□□□ -0.69
HDAC3-205ENST00000469550 IRF6O14896 467 aa10.72□□□□□ -0.69
HDAC3-205ENST00000469550 DEXIO95424 95 aa10.72□□□□□ -0.69
HDAC3-205ENST00000469550 BMP15O95972 392 aa10.72□□□□□ -0.69
HDAC3-205ENST00000469550 CD44P16070 742 aaKnown RBP10.72□□□□□ -0.69
HDAC3-205ENST00000469550 RXRAP19793 462 aa10.72□□□□□ -0.69
HDAC3-205ENST00000469550 PRMT2P55345 433 aa10.72□□□□□ -0.69
HDAC3-205ENST00000469550 DPYDQ12882 1025 aa10.72□□□□□ -0.69
HDAC3-205ENST00000469550 WWC2Q6AWC2 1192 aa10.72□□□□□ -0.69
HDAC3-205ENST00000469550 CDC42EP5Q6NZY7 148 aa10.72□□□□□ -0.69
HDAC3-205ENST00000469550 GRAMD1CQ8IYS0 662 aa10.72□□□□□ -0.69
HDAC3-205ENST00000469550 ACRBPQ8NEB7 543 aa10.72□□□□□ -0.69
HDAC3-205ENST00000469550 ZKSCAN4Q969J2 545 aaPredicted RBP10.72□□□□□ -0.69
HDAC3-205ENST00000469550 CSRNP2Q9H175 543 aa10.72□□□□□ -0.69
HDAC3-205ENST00000469550 HAUS4Q9H6D7 363 aa10.72□□□□□ -0.69
HDAC3-205ENST00000469550 CNNM2Q9H8M5 875 aa10.72□□□□□ -0.69
HDAC3-205ENST00000469550 SENP2Q9HC62 589 aa10.72□□□□□ -0.69
HDAC3-205ENST00000469550 GNL3LQ9NVN8 582 aaKnown RBP10.72□□□□□ -0.69
HDAC3-205ENST00000469550 HPCAL4Q9UM19 191 aa10.72□□□□□ -0.69
HDAC3-205ENST00000469550 PCDHB6Q9Y5E3 794 aa10.72□□□□□ -0.69
HDAC3-205ENST00000469550 ATRNL1Q5VV63 1379 aa10.72□□□□□ -0.69
HDAC3-205ENST00000469550 CCDC196A0A1B0GTZ2 297 aa10.71□□□□□ -0.69
HDAC3-205ENST00000469550 SWT1Q5T5J6 900 aaKnown RBP10.71□□□□□ -0.69
HDAC3-205ENST00000469550 PAPD7Q5XG87 772 aaKnown RBP10.71□□□□□ -0.69
HDAC3-205ENST00000469550 ANKRD23Q86SG2 305 aa10.71□□□□□ -0.69
HDAC3-205ENST00000469550 NKX2-3Q8TAU0 364 aa10.71□□□□□ -0.69
HDAC3-205ENST00000469550 COG1Q8WTW3 980 aa10.71□□□□□ -0.69
HDAC3-205ENST00000469550 PAGE5Q96GU1 130 aa10.71□□□□□ -0.69
HDAC3-205ENST00000469550 DENND2AQ9ULE3 1009 aa10.71□□□□□ -0.69
HDAC3-205ENST00000469550 PTCH2Q9Y6C5 1203 aa10.71□□□□□ -0.69
HDAC3-205ENST00000469550 GAKO14976 1311 aa10.71□□□□□ -0.7
HDAC3-205ENST00000469550 HTTP42858 3142 aa10.71□□□□□ -0.7
HDAC3-205ENST00000469550 DOCK1Q14185 1865 aa10.71□□□□□ -0.7
HDAC3-205ENST00000469550 LDHBP07195 334 aaKnown RBP10.7□□□□□ -0.7
HDAC3-205ENST00000469550 ATP2B1P20020 1258 aa10.7□□□□□ -0.7
HDAC3-205ENST00000469550 LACTBP83111 547 aaPredicted RBP10.7□□□□□ -0.7
HDAC3-205ENST00000469550 CKAP4Q07065 602 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms