RNA–Protein interactions for RNA: ENST00000469535.5

CD46-212, Transcript of CD46 molecule, humanhuman

TSL 1 (best)

Gene CD46, Length 7,826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-212ENST00000469535 IQCA1LA6NCM1 817 aa7.7□□□□□ -1.18
CD46-212ENST00000469535 CD58P19256 250 aa7.7□□□□□ -1.18
CD46-212ENST00000469535 POLR2FP61218 127 aaKnown RBP7.7□□□□□ -1.18
CD46-212ENST00000469535 PROSER3Q2NL68 480 aa7.7□□□□□ -1.18
CD46-212ENST00000469535 ZNF467Q7Z7K2 595 aaPredicted RBP7.7□□□□□ -1.18
CD46-212ENST00000469535 GPATCH11Q8N954 259 aa7.7□□□□□ -1.18
CD46-212ENST00000469535 MMTAG2Q9BU76 263 aaKnown RBP7.7□□□□□ -1.18
CD46-212ENST00000469535 TDRD3Q9H7E2 651 aaKnown RBP7.7□□□□□ -1.18
CD46-212ENST00000469535 TCOF1Q13428 1488 aaKnown RBP7.7□□□□□ -1.18
CD46-212ENST00000469535 AOX1Q06278 1338 aa7.7□□□□□ -1.18
CD46-212ENST00000469535 ATP10DQ9P241 1426 aa7.7□□□□□ -1.18
CD46-212ENST00000469535 PPP1R12AO14974 1030 aaPredicted RBP7.7□□□□□ -1.18
CD46-212ENST00000469535 HSPD1P10809 573 aaKnown RBP7.7□□□□□ -1.18
CD46-212ENST00000469535 ZNF157P51786 506 aaPredicted RBP7.7□□□□□ -1.18
CD46-212ENST00000469535 PHLDB2Q86SQ0 1253 aa7.7□□□□□ -1.18
CD46-212ENST00000469535 ARFGAP2Q8N6H7 521 aa7.7□□□□□ -1.18
CD46-212ENST00000469535 FAM76AQ8TAV0 307 aa7.7□□□□□ -1.18
CD46-212ENST00000469535 ARHGEF2Q92974 986 aaKnown RBP7.7□□□□□ -1.18
CD46-212ENST00000469535 RAVER2Q9HCJ3 691 aaKnown RBP7.7□□□□□ -1.18
CD46-212ENST00000469535 CALCOCO1Q9P1Z2 691 aa7.7□□□□□ -1.18
CD46-212ENST00000469535 NEMP1O14524 444 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 BUB1O43683 1085 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 COBLO75128 1261 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 CAPN2P17655 700 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 CRKP46108 304 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 SEPT6Q14141 434 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 CCDC62Q6P9F0 684 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 PIGBQ92521 554 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 SNX21Q969T3 373 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 MMP19Q99542 508 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 RPF1Q9H9Y2 349 aaKnown RBP7.69□□□□□ -1.18
CD46-212ENST00000469535 RIC8AQ9NPQ8 531 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 SAMD9Q5K651 1589 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 FGAP02671 866 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 SRGAP2BP0DMP2 458 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 IQCB1Q15051 598 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 TWF2Q6IBS0 349 aaKnown RBP7.69□□□□□ -1.18
CD46-212ENST00000469535 USP17L2Q6R6M4 530 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 SCN4BQ8IWT1 228 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 THEM5Q8N1Q8 247 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 ANKRD42Q8N9B4 389 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 IFIH1Q9BYX4 1025 aaKnown RBP7.69□□□□□ -1.18
CD46-212ENST00000469535 COA1Q9GZY4 146 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 KDM2BQ8NHM5 1336 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 ZNF233A6NK53 670 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 FBXW4P57775 412 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 PTK2Q05397 1052 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 MTX1Q13505 466 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 MORC3Q14149 939 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 IFT20Q8IY31 132 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 CDC26Q8NHZ8 85 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 RBM46Q8TBY0 533 aaKnown RBP7.69□□□□□ -1.18
CD46-212ENST00000469535 HEXIM2Q96MH2 286 aaKnown RBP7.69□□□□□ -1.18
CD46-212ENST00000469535 PTPRKQ15262 1439 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 KCNJ18B7U540 433 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 GH2P01242 217 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 KCNJ12Q14500 433 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 JADE1Q6IE81 842 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 NOSTRINQ8IVI9 506 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 ACCSQ96QU6 501 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 TESK2Q96S53 571 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 PLCB1Q9NQ66 1216 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 CLIC2O15247 247 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 BUB1BO60566 1050 aaPredicted RBP7.69□□□□□ -1.18
CD46-212ENST00000469535 MFAP3P55082 362 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 CDC37Q16543 378 aaPredicted RBP7.69□□□□□ -1.18
CD46-212ENST00000469535 RC3H1Q5TC82 1133 aaKnown RBP7.69□□□□□ -1.18
CD46-212ENST00000469535 NT5C1BQ96P26 610 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 PARD3Q8TEW0 1356 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 TNPO2O14787 897 aaKnown RBP7.69□□□□□ -1.18
CD46-212ENST00000469535 ACTN1P12814 892 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 OR6B2Q6IFH4 312 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 CCDC84Q86UT8 332 aaPredicted RBP7.69□□□□□ -1.18
CD46-212ENST00000469535 APOBEC3FQ8IUX4 373 aaKnown RBP7.69□□□□□ -1.18
CD46-212ENST00000469535 RABEP2Q9H5N1 569 aa7.69□□□□□ -1.18
CD46-212ENST00000469535 CAPN15O75808 1086 aa7.68□□□□□ -1.18
CD46-212ENST00000469535 IL1RL1Q01638 556 aa7.68□□□□□ -1.18
CD46-212ENST00000469535 FOXD4Q12950 439 aaPredicted RBP7.68□□□□□ -1.18
CD46-212ENST00000469535 FAM83BQ5T0W9 1011 aa7.68□□□□□ -1.18
CD46-212ENST00000469535 RWDD4Q6NW29 188 aaKnown RBP7.68□□□□□ -1.18
CD46-212ENST00000469535 TPCN1Q9ULQ1 816 aa7.68□□□□□ -1.18
CD46-212ENST00000469535 PRKAB2O43741 272 aa7.68□□□□□ -1.18
CD46-212ENST00000469535 SUSD4Q5VX71 490 aa7.68□□□□□ -1.18
CD46-212ENST00000469535 OR6B3Q8NGW1 331 aa7.68□□□□□ -1.18
CD46-212ENST00000469535 MCUR1Q96AQ8 359 aa7.68□□□□□ -1.18
CD46-212ENST00000469535 TTC25Q96NG3 672 aa7.68□□□□□ -1.18
CD46-212ENST00000469535 PHBP35232 272 aa7.68□□□□□ -1.18
CD46-212ENST00000469535 DDIT3P35638 169 aa7.68□□□□□ -1.18
CD46-212ENST00000469535 RECQLP46063 649 aaPredicted RBP7.68□□□□□ -1.18
CD46-212ENST00000469535 KCNJ6P48051 423 aa7.68□□□□□ -1.18
CD46-212ENST00000469535 GALNT17Q6IS24 598 aa7.68□□□□□ -1.18
CD46-212ENST00000469535 FAM160B2Q86V87 743 aa7.68□□□□□ -1.18
CD46-212ENST00000469535 CCDC170Q8IYT3 715 aa7.68□□□□□ -1.18
CD46-212ENST00000469535 PPFIBP2Q8ND30 876 aa7.68□□□□□ -1.18
CD46-212ENST00000469535 TTC1Q99614 292 aa7.68□□□□□ -1.18
CD46-212ENST00000469535 KCNK3O14649 394 aa7.68□□□□□ -1.18
CD46-212ENST00000469535 MECOMQ03112 1051 aa7.68□□□□□ -1.18
CD46-212ENST00000469535 FAM26FQ5R3K3 315 aa7.68□□□□□ -1.18
CD46-212ENST00000469535 EAF2Q96CJ1 260 aaPredicted RBP7.68□□□□□ -1.18
CD46-212ENST00000469535 EEF2KMTQ96G04 330 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms