RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 LY6KQ17RY6 165 aa14.39□□□□□ -0.11
HDAC3-204ENST00000469207 PPP2R2DQ66LE6 453 aa14.39□□□□□ -0.11
HDAC3-204ENST00000469207 CWC27Q6UX04 472 aaKnown RBP14.39□□□□□ -0.11
HDAC3-204ENST00000469207 SEPT14Q6ZU15 432 aa14.39□□□□□ -0.11
HDAC3-204ENST00000469207 CHST3Q7LGC8 479 aa14.39□□□□□ -0.11
HDAC3-204ENST00000469207 PLEKHM2Q8IWE5 1019 aa14.39□□□□□ -0.11
HDAC3-204ENST00000469207 SEZ6LQ9BYH1 1024 aa14.39□□□□□ -0.11
HDAC3-204ENST00000469207 B4E1Z4 1266 aa14.38□□□□□ -0.11
HDAC3-204ENST00000469207 IQCF3P0C7M6 154 aa14.38□□□□□ -0.11
HDAC3-204ENST00000469207 SUPT20HL2P0C7V6 817 aa14.38□□□□□ -0.11
HDAC3-204ENST00000469207 KRT40Q6A162 431 aa14.38□□□□□ -0.11
HDAC3-204ENST00000469207 SPRED2Q7Z698 418 aa14.38□□□□□ -0.11
HDAC3-204ENST00000469207 ADGRF4Q8IZF3 695 aa14.38□□□□□ -0.11
HDAC3-204ENST00000469207 DNERQ8NFT8 737 aa14.38□□□□□ -0.11
HDAC3-204ENST00000469207 SCFD2Q8WU76 684 aa14.38□□□□□ -0.11
HDAC3-204ENST00000469207 AFG1LQ8WV93 481 aa14.38□□□□□ -0.11
HDAC3-204ENST00000469207 ESR2Q92731 530 aa14.38□□□□□ -0.11
HDAC3-204ENST00000469207 ASB2Q96Q27 587 aa14.38□□□□□ -0.11
HDAC3-204ENST00000469207 PCDHA11Q9Y5I1 949 aa14.38□□□□□ -0.11
HDAC3-204ENST00000469207 ZMYM6O95789 1325 aa14.38□□□□□ -0.11
HDAC3-204ENST00000469207 LOC102724159A0A0B4J2E5 919 aa14.37□□□□□ -0.11
HDAC3-204ENST00000469207 EPOPA6NHQ4 379 aa14.37□□□□□ -0.11
HDAC3-204ENST00000469207 TNFRSF10AO00220 468 aa14.37□□□□□ -0.11
HDAC3-204ENST00000469207 CA3P07451 260 aa14.37□□□□□ -0.11
HDAC3-204ENST00000469207 TFF2Q03403 129 aa14.37□□□□□ -0.11
HDAC3-204ENST00000469207 GPNMBQ14956 572 aa14.37□□□□□ -0.11
HDAC3-204ENST00000469207 PWP2Q15269 919 aaKnown RBP14.37□□□□□ -0.11
HDAC3-204ENST00000469207 CDC37Q16543 378 aaPredicted RBP14.37□□□□□ -0.11
HDAC3-204ENST00000469207 CCDC62Q6P9F0 684 aa14.37□□□□□ -0.11
HDAC3-204ENST00000469207 TMCO2Q7Z6W1 182 aaPredicted RBP14.37□□□□□ -0.11
HDAC3-204ENST00000469207 DGKHQ86XP1 1220 aa14.37□□□□□ -0.11
HDAC3-204ENST00000469207 PNMA1Q8ND90 353 aa14.37□□□□□ -0.11
HDAC3-204ENST00000469207 SYTL5Q8TDW5 730 aaPredicted RBP14.37□□□□□ -0.11
HDAC3-204ENST00000469207 ATXN2LQ8WWM7 1075 aaKnown RBP14.37□□□□□ -0.11
HDAC3-204ENST00000469207 ZSWIM5Q9P217 1185 aa14.37□□□□□ -0.11
HDAC3-204ENST00000469207 THEGQ9P2T0 379 aa14.37□□□□□ -0.11
HDAC3-204ENST00000469207 RAPGEFL1Q9UHV5 662 aa14.37□□□□□ -0.11
HDAC3-204ENST00000469207 WDR19Q8NEZ3 1342 aa14.37□□□□□ -0.11
HDAC3-204ENST00000469207 XIRP2A4UGR9 3374 aa14.36□□□□□ -0.11
HDAC3-204ENST00000469207 TTC28Q96AY4 2481 aa14.36□□□□□ -0.11
HDAC3-204ENST00000469207 NKRFO15226 690 aaKnown RBP eCLIP14.36□□□□□ -0.11
HDAC3-204ENST00000469207 QRICH1Q2TAL8 776 aa14.36□□□□□ -0.11
HDAC3-204ENST00000469207 TMEM67Q5HYA8 995 aa14.36□□□□□ -0.11
HDAC3-204ENST00000469207 GPATCH4Q5T3I0 446 aaKnown RBP14.36□□□□□ -0.11
HDAC3-204ENST00000469207 NFRKBQ6P4R8 1299 aa14.36□□□□□ -0.11
HDAC3-204ENST00000469207 CHD1LQ86WJ1 897 aa14.36□□□□□ -0.11
HDAC3-204ENST00000469207 SMC5Q8IY18 1101 aa14.36□□□□□ -0.11
HDAC3-204ENST00000469207 STAG2Q8N3U4 1231 aa14.36□□□□□ -0.11
HDAC3-204ENST00000469207 RETREG2Q8NC44 543 aa14.36□□□□□ -0.11
HDAC3-204ENST00000469207 RGS22Q8NE09 1264 aa14.36□□□□□ -0.11
HDAC3-204ENST00000469207 KAT2BQ92831 832 aa14.36□□□□□ -0.11
HDAC3-204ENST00000469207 ZFP91Q96JP5 570 aaPredicted RBP14.36□□□□□ -0.11
HDAC3-204ENST00000469207 NECAB3Q96P71 396 aaPredicted RBP14.36□□□□□ -0.11
HDAC3-204ENST00000469207 CTAGE1Q96RT6 745 aa14.36□□□□□ -0.11
HDAC3-204ENST00000469207 FTOQ9C0B1 505 aaKnown RBP eCLIP14.36□□□□□ -0.11
HDAC3-204ENST00000469207 IL25Q9H293 177 aa14.36□□□□□ -0.11
HDAC3-204ENST00000469207 RNF41Q9H4P4 317 aaPredicted RBP14.36□□□□□ -0.11
HDAC3-204ENST00000469207 JMJD4Q9H9V9 463 aa14.36□□□□□ -0.11
HDAC3-204ENST00000469207 TET1Q8NFU7 2136 aa14.35□□□□□ -0.11
HDAC3-204ENST00000469207 SCN10AQ9Y5Y9 1956 aa14.35□□□□□ -0.11
HDAC3-204ENST00000469207 SORBS3O60504 671 aa14.35□□□□□ -0.11
HDAC3-204ENST00000469207 MMP3P08254 477 aa14.35□□□□□ -0.11
HDAC3-204ENST00000469207 MRPS5P82675 430 aaKnown RBP14.35□□□□□ -0.11
HDAC3-204ENST00000469207 ARHGAP1Q07960 439 aa14.35□□□□□ -0.11
HDAC3-204ENST00000469207 PTGISQ16647 500 aa14.35□□□□□ -0.11
HDAC3-204ENST00000469207 TCTN1Q2MV58 587 aa14.35□□□□□ -0.11
HDAC3-204ENST00000469207 BRDTQ58F21 947 aaPredicted RBP14.35□□□□□ -0.11
HDAC3-204ENST00000469207 GDF6Q6KF10 455 aaPredicted RBP14.35□□□□□ -0.11
HDAC3-204ENST00000469207 ENAHQ8N8S7 591 aaPredicted RBP14.35□□□□□ -0.11
HDAC3-204ENST00000469207 ADAMTS19Q8TE59 1207 aa14.35□□□□□ -0.11
HDAC3-204ENST00000469207 ANKS1AQ92625 1134 aa14.35□□□□□ -0.11
HDAC3-204ENST00000469207 ZSCAN10Q96SZ4 725 aaPredicted RBP14.35□□□□□ -0.11
HDAC3-204ENST00000469207 MPHOSPH6Q99547 160 aaKnown RBP14.35□□□□□ -0.11
HDAC3-204ENST00000469207 KAT14Q9H8E8 782 aa14.35□□□□□ -0.11
HDAC3-204ENST00000469207 TRIP12Q14669 1992 aaPredicted RBP14.34□□□□□ -0.11
HDAC3-204ENST00000469207 TCF20Q9UGU0 1960 aaKnown RBP14.34□□□□□ -0.11
HDAC3-204ENST00000469207 DHX16O60231 1041 aaKnown RBP14.34□□□□□ -0.11
HDAC3-204ENST00000469207 KPNA6O60684 536 aa14.34□□□□□ -0.11
HDAC3-204ENST00000469207 PCP11498 1178 aaKnown RBP14.34□□□□□ -0.11
HDAC3-204ENST00000469207 EIF2AK2P19525 551 aaKnown RBP14.34□□□□□ -0.11
HDAC3-204ENST00000469207 NUCB1Q02818 461 aa14.34□□□□□ -0.11
HDAC3-204ENST00000469207 TAP1Q03518 808 aa14.34□□□□□ -0.11
HDAC3-204ENST00000469207 TICAM2Q86XR7 235 aa14.34□□□□□ -0.11
HDAC3-204ENST00000469207 EXOC6Q8TAG9 804 aa14.34□□□□□ -0.11
HDAC3-204ENST00000469207 DHX38Q92620 1227 aaKnown RBP14.34□□□□□ -0.11
HDAC3-204ENST00000469207 RMDN3Q96TC7 470 aa14.34□□□□□ -0.11
HDAC3-204ENST00000469207 RWDD1Q9H446 243 aaPredicted RBP14.34□□□□□ -0.11
HDAC3-204ENST00000469207 DDX41Q9UJV9 622 aaKnown RBP14.34□□□□□ -0.11
HDAC3-204ENST00000469207 PNMA2Q9UL42 364 aa14.34□□□□□ -0.11
HDAC3-204ENST00000469207 NOD1Q9Y239 953 aa14.34□□□□□ -0.11
HDAC3-204ENST00000469207 MTCH2Q9Y6C9 303 aa14.34□□□□□ -0.11
HDAC3-204ENST00000469207 RAD50Q92878 1312 aa14.34□□□□□ -0.11
HDAC3-204ENST00000469207 B4DLN1 442 aa14.33□□□□□ -0.12
HDAC3-204ENST00000469207 OPLAHO14841 1288 aa14.33□□□□□ -0.12
HDAC3-204ENST00000469207 CFBP00751 764 aa14.33□□□□□ -0.12
HDAC3-204ENST00000469207 GH1P01241 217 aa14.33□□□□□ -0.12
HDAC3-204ENST00000469207 PFKMP08237 780 aa14.33□□□□□ -0.12
HDAC3-204ENST00000469207 ACTN1P12814 892 aa14.33□□□□□ -0.12
HDAC3-204ENST00000469207 KCNQ1P51787 676 aa14.33□□□□□ -0.12
HDAC3-204ENST00000469207 MRPL12P52815 198 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms