RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 PPP1R13LQ8WUF5 828 aa24.64■■□□□ 1.54
COL9A3-207ENST00000467819 MTG1Q9BT17 334 aaPredicted RBP24.64■■□□□ 1.54
COL9A3-207ENST00000467819 ZSWIM5Q9P217 1185 aa24.64■■□□□ 1.54
COL9A3-207ENST00000467819 CHD9Q3L8U1 2897 aa24.64■■□□□ 1.53
COL9A3-207ENST00000467819 ABCB11O95342 1321 aa24.63■■□□□ 1.53
COL9A3-207ENST00000467819 B4DLN1 442 aa24.63■■□□□ 1.53
COL9A3-207ENST00000467819 DHX16O60231 1041 aaKnown RBP24.63■■□□□ 1.53
COL9A3-207ENST00000467819 TXNP10599 105 aaKnown RBP24.63■■□□□ 1.53
COL9A3-207ENST00000467819 CYP2C9P11712 490 aa24.63■■□□□ 1.53
COL9A3-207ENST00000467819 MRPL12P52815 198 aaKnown RBP24.63■■□□□ 1.53
COL9A3-207ENST00000467819 ASPRV1Q53RT3 343 aa24.63■■□□□ 1.53
COL9A3-207ENST00000467819 FAM47CQ5HY64 1035 aa24.63■■□□□ 1.53
COL9A3-207ENST00000467819 TBC1D5Q92609 795 aa24.63■■□□□ 1.53
COL9A3-207ENST00000467819 ANKS1AQ92625 1134 aa24.63■■□□□ 1.53
COL9A3-207ENST00000467819 TANC1Q9C0D5 1861 aa24.63■■□□□ 1.53
COL9A3-207ENST00000467819 NBPF20Q3BBV1 942 aa24.62■■□□□ 1.53
COL9A3-207ENST00000467819 RGS22Q8NE09 1264 aa24.62■■□□□ 1.53
COL9A3-207ENST00000467819 CTNNA3Q9UI47 895 aa24.62■■□□□ 1.53
COL9A3-207ENST00000467819 MSRAQ9UJ68 235 aa24.62■■□□□ 1.53
COL9A3-207ENST00000467819 TRIP12Q14669 1992 aaPredicted RBP24.62■■□□□ 1.53
COL9A3-207ENST00000467819 MYH7BA7E2Y1 1941 aa24.61■■□□□ 1.53
COL9A3-207ENST00000467819 ARIH2O95376 493 aa24.61■■□□□ 1.53
COL9A3-207ENST00000467819 PARP1P09874 1014 aaKnown RBP24.61■■□□□ 1.53
COL9A3-207ENST00000467819 SUPT20HL2P0C7V6 817 aa24.61■■□□□ 1.53
COL9A3-207ENST00000467819 TTLL4Q14679 1199 aa24.61■■□□□ 1.53
COL9A3-207ENST00000467819 RAB30Q15771 203 aa24.61■■□□□ 1.53
COL9A3-207ENST00000467819 QRICH1Q2TAL8 776 aa24.61■■□□□ 1.53
COL9A3-207ENST00000467819 RPUSD2Q8IZ73 545 aaKnown RBP24.61■■□□□ 1.53
COL9A3-207ENST00000467819 GAS2L1Q99501 681 aaPredicted RBP24.61■■□□□ 1.53
COL9A3-207ENST00000467819 UBAC1Q9BSL1 405 aa24.61■■□□□ 1.53
COL9A3-207ENST00000467819 KRT23Q9C075 422 aa24.61■■□□□ 1.53
COL9A3-207ENST00000467819 IL25Q9H293 177 aa24.61■■□□□ 1.53
COL9A3-207ENST00000467819 PRDM12Q9H4Q4 367 aa24.61■■□□□ 1.53
COL9A3-207ENST00000467819 VAT1LQ9HCJ6 419 aa24.61■■□□□ 1.53
COL9A3-207ENST00000467819 USP38Q8NB14 1042 aa24.6■■□□□ 1.53
COL9A3-207ENST00000467819 SYTL5Q8TDW5 730 aaPredicted RBP24.6■■□□□ 1.53
COL9A3-207ENST00000467819 TAAR1Q96RJ0 339 aa24.6■■□□□ 1.53
COL9A3-207ENST00000467819 NKX2-4Q9H2Z4 354 aa24.6■■□□□ 1.53
COL9A3-207ENST00000467819 COL20A1Q9P218 1284 aa24.6■■□□□ 1.53
COL9A3-207ENST00000467819 SPTBN5Q9NRC6 3674 aaKnown RBP24.59■■□□□ 1.53
COL9A3-207ENST00000467819 A6NJR5 290 aa24.59■■□□□ 1.53
COL9A3-207ENST00000467819 ZBBXA8MT70 800 aa24.59■■□□□ 1.53
COL9A3-207ENST00000467819 CHMP4BP1P59074 171 aa24.59■■□□□ 1.53
COL9A3-207ENST00000467819 FBXO11Q86XK2 927 aa24.59■■□□□ 1.53
COL9A3-207ENST00000467819 CNNM2Q9H8M5 875 aa24.59■■□□□ 1.53
COL9A3-207ENST00000467819 KPNA6O60684 536 aa24.58■■□□□ 1.53
COL9A3-207ENST00000467819 IFIT1BQ5T764 474 aaKnown RBP24.58■■□□□ 1.53
COL9A3-207ENST00000467819 SEPT14Q6ZU15 432 aa24.58■■□□□ 1.53
COL9A3-207ENST00000467819 DEFB128Q7Z7B8 93 aa24.58■■□□□ 1.53
COL9A3-207ENST00000467819 MCF2L2Q86YR7 1114 aa24.58■■□□□ 1.53
COL9A3-207ENST00000467819 NSUN6Q8TEA1 469 aaKnown RBP24.58■■□□□ 1.53
COL9A3-207ENST00000467819 VWCEQ96DN2 955 aa24.58■■□□□ 1.53
COL9A3-207ENST00000467819 JMJD4Q9H9V9 463 aa24.58■■□□□ 1.53
COL9A3-207ENST00000467819 YBX2Q9Y2T7 364 aaKnown RBP24.58■■□□□ 1.53
COL9A3-207ENST00000467819 MRPL11Q9Y3B7 192 aaKnown RBP24.58■■□□□ 1.53
COL9A3-207ENST00000467819 SLC4A7Q9Y6M7 1214 aa24.58■■□□□ 1.53
COL9A3-207ENST00000467819 BAZ2BQ9UIF8 2168 aaKnown RBP24.58■■□□□ 1.53
COL9A3-207ENST00000467819 RABGGTBP53611 331 aa24.57■■□□□ 1.52
COL9A3-207ENST00000467819 NFRKBQ6P4R8 1299 aa24.57■■□□□ 1.52
COL9A3-207ENST00000467819 STAG2Q8N3U4 1231 aa24.57■■□□□ 1.52
COL9A3-207ENST00000467819 TET1Q8NFU7 2136 aa24.57■■□□□ 1.52
COL9A3-207ENST00000467819 PPM1EQ8WY54 764 aa24.57■■□□□ 1.52
COL9A3-207ENST00000467819 RMDN3Q96TC7 470 aa24.57■■□□□ 1.52
COL9A3-207ENST00000467819 SLC28A3Q9HAS3 691 aa24.57■■□□□ 1.52
COL9A3-207ENST00000467819 TTC28Q96AY4 2481 aa24.56■■□□□ 1.52
COL9A3-207ENST00000467819 EIF2AK2P19525 551 aaKnown RBP24.56■■□□□ 1.52
COL9A3-207ENST00000467819 PDE4AP27815 886 aa24.56■■□□□ 1.52
COL9A3-207ENST00000467819 LY6KQ17RY6 165 aa24.56■■□□□ 1.52
COL9A3-207ENST00000467819 CCDC62Q6P9F0 684 aa24.56■■□□□ 1.52
COL9A3-207ENST00000467819 CHST3Q7LGC8 479 aa24.56■■□□□ 1.52
COL9A3-207ENST00000467819 AFG1LQ8WV93 481 aa24.56■■□□□ 1.52
COL9A3-207ENST00000467819 MAF1Q9H063 256 aa24.56■■□□□ 1.52
COL9A3-207ENST00000467819 CHD7Q9P2D1 2997 aa24.56■■□□□ 1.52
COL9A3-207ENST00000467819 CFBP00751 764 aa24.55■■□□□ 1.52
COL9A3-207ENST00000467819 GH1P01241 217 aa24.55■■□□□ 1.52
COL9A3-207ENST00000467819 GSPT1P15170 499 aaKnown RBP24.55■■□□□ 1.52
COL9A3-207ENST00000467819 STXBP2Q15833 593 aa24.55■■□□□ 1.52
COL9A3-207ENST00000467819 ARHGEF16Q5VV41 709 aa24.55■■□□□ 1.52
COL9A3-207ENST00000467819 CYB5R4Q7L1T6 521 aa24.55■■□□□ 1.52
COL9A3-207ENST00000467819 NOD1Q9Y239 953 aa24.55■■□□□ 1.52
COL9A3-207ENST00000467819 PFKMP08237 780 aa24.54■■□□□ 1.52
COL9A3-207ENST00000467819 MMP3P08254 477 aa24.54■■□□□ 1.52
COL9A3-207ENST00000467819 ARHGAP1Q07960 439 aa24.54■■□□□ 1.52
COL9A3-207ENST00000467819 TTC22Q5TAA0 569 aa24.54■■□□□ 1.52
COL9A3-207ENST00000467819 IWS1Q96ST2 819 aa24.54■■□□□ 1.52
COL9A3-207ENST00000467819 KLRF2D3W0D1 207 aa24.53■■□□□ 1.52
COL9A3-207ENST00000467819 MYOGP15173 224 aa24.53■■□□□ 1.52
COL9A3-207ENST00000467819 ATP2A2P16615 1042 aaKnown RBP24.53■■□□□ 1.52
COL9A3-207ENST00000467819 IGFBP4P22692 258 aa24.53■■□□□ 1.52
COL9A3-207ENST00000467819 PTPN11Q06124 597 aaPredicted RBP24.53■■□□□ 1.52
COL9A3-207ENST00000467819 ADGRE1Q14246 886 aa24.53■■□□□ 1.52
COL9A3-207ENST00000467819 SEC23AQ15436 765 aa24.53■■□□□ 1.52
COL9A3-207ENST00000467819 RETREG2Q8NC44 543 aa24.53■■□□□ 1.52
COL9A3-207ENST00000467819 AMNQ9BXJ7 453 aa24.53■■□□□ 1.52
COL9A3-207ENST00000467819 PRDM6Q9NQX0 595 aa24.53■■□□□ 1.52
COL9A3-207ENST00000467819 PPP2R2DQ66LE6 453 aa24.52■■□□□ 1.52
COL9A3-207ENST00000467819 PXMP2Q9NR77 195 aa24.52■■□□□ 1.52
COL9A3-207ENST00000467819 MAD2L2Q9UI95 211 aa24.52■■□□□ 1.52
COL9A3-207ENST00000467819 SUPT16HQ9Y5B9 1047 aaKnown RBP24.52■■□□□ 1.52
COL9A3-207ENST00000467819 PTPRSQ13332 1948 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms