RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 TLDC1Q6P9B6 456 aa20.01■□□□□ 0.79
SNAPC3-205ENST00000467062 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.01■□□□□ 0.79
SNAPC3-205ENST00000467062 ZNF444Q8N0Y2 327 aaPredicted RBP20.01■□□□□ 0.79
SNAPC3-205ENST00000467062 CNBD1Q8NA66 436 aa20.01■□□□□ 0.79
SNAPC3-205ENST00000467062 LRRC4BQ9NT99 713 aa20.01■□□□□ 0.79
SNAPC3-205ENST00000467062 ETAA1Q9NY74 926 aa20.01■□□□□ 0.79
SNAPC3-205ENST00000467062 USP21Q9UK80 565 aa20.01■□□□□ 0.79
SNAPC3-205ENST00000467062 GPSM2P81274 684 aa20.01■□□□□ 0.79
SNAPC3-205ENST00000467062 ACRBPQ8NEB7 543 aa20.01■□□□□ 0.79
SNAPC3-205ENST00000467062 GSDMAQ96QA5 445 aa20.01■□□□□ 0.79
SNAPC3-205ENST00000467062 VPS16Q9H269 839 aa20.01■□□□□ 0.79
SNAPC3-205ENST00000467062 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.01■□□□□ 0.79
SNAPC3-205ENST00000467062 MYH6P13533 1939 aa20.01■□□□□ 0.79
SNAPC3-205ENST00000467062 GCKP35557 465 aa20■□□□□ 0.79
SNAPC3-205ENST00000467062 PDCLQ13371 301 aa20■□□□□ 0.79
SNAPC3-205ENST00000467062 GRAPQ13588 217 aa20■□□□□ 0.79
SNAPC3-205ENST00000467062 SPTY2D1Q68D10 685 aaPredicted RBP20■□□□□ 0.79
SNAPC3-205ENST00000467062 PDXDC2PQ6P474 469 aa20■□□□□ 0.79
SNAPC3-205ENST00000467062 PPP1R3FQ6ZSY5 799 aaPredicted RBP20■□□□□ 0.79
SNAPC3-205ENST00000467062 RASSF8Q8NHQ8 419 aa20■□□□□ 0.79
SNAPC3-205ENST00000467062 GRAPLQ8TC17 118 aaPredicted RBP20■□□□□ 0.79
SNAPC3-205ENST00000467062 TATDN2Q93075 761 aa20■□□□□ 0.79
SNAPC3-205ENST00000467062 RUFY1Q96T51 708 aa20■□□□□ 0.79
SNAPC3-205ENST00000467062 EPN3Q9H201 632 aa20■□□□□ 0.79
SNAPC3-205ENST00000467062 IBSPP21815 317 aaPredicted RBP20■□□□□ 0.79
SNAPC3-205ENST00000467062 FECHP22830 423 aa20■□□□□ 0.79
SNAPC3-205ENST00000467062 GBP2P32456 591 aaPredicted RBP20■□□□□ 0.79
SNAPC3-205ENST00000467062 AENQ8WTP8 325 aaKnown RBP20■□□□□ 0.79
SNAPC3-205ENST00000467062 TMEM47Q9BQJ4 181 aa20■□□□□ 0.79
SNAPC3-205ENST00000467062 SH3BP1Q9Y3L3 701 aa20■□□□□ 0.79
SNAPC3-205ENST00000467062 NAA35Q5VZE5 725 aa19.99■□□□□ 0.79
SNAPC3-205ENST00000467062 USP17L2Q6R6M4 530 aa19.99■□□□□ 0.79
SNAPC3-205ENST00000467062 C4orf32Q8N8J7 132 aa19.99■□□□□ 0.79
SNAPC3-205ENST00000467062 WDR66Q8TBY9 1149 aa19.99■□□□□ 0.79
SNAPC3-205ENST00000467062 CCDC114Q96M63 670 aa19.99■□□□□ 0.79
SNAPC3-205ENST00000467062 MMS19Q96T76 1030 aa19.99■□□□□ 0.79
SNAPC3-205ENST00000467062 BATF3Q9NR55 127 aa19.99■□□□□ 0.79
SNAPC3-205ENST00000467062 SAR1BQ9Y6B6 198 aa19.99■□□□□ 0.79
SNAPC3-205ENST00000467062 COL5A3P25940 1745 aaPredicted RBP19.99■□□□□ 0.79
SNAPC3-205ENST00000467062 TOM1O60784 492 aa19.99■□□□□ 0.79
SNAPC3-205ENST00000467062 UFL1O94874 794 aa19.99■□□□□ 0.79
SNAPC3-205ENST00000467062 CASP14P31944 242 aa19.99■□□□□ 0.79
SNAPC3-205ENST00000467062 ALS2CLQ60I27 953 aa19.99■□□□□ 0.79
SNAPC3-205ENST00000467062 KIAA1328Q86T90 577 aa19.99■□□□□ 0.79
SNAPC3-205ENST00000467062 RSRC1Q96IZ7 334 aaKnown RBP19.99■□□□□ 0.79
SNAPC3-205ENST00000467062 ADD3Q9UEY8 706 aaKnown RBP19.99■□□□□ 0.79
SNAPC3-205ENST00000467062 PCDHA4Q9UN74 947 aa19.99■□□□□ 0.79
SNAPC3-205ENST00000467062 LAMB2P55268 1798 aa19.99■□□□□ 0.79
SNAPC3-205ENST00000467062 CCDC194A0A1B0GVG4 234 aa19.98■□□□□ 0.79
SNAPC3-205ENST00000467062 RNF225M0QZC1 329 aaPredicted RBP19.98■□□□□ 0.79
SNAPC3-205ENST00000467062 BMP15O95972 392 aa19.98■□□□□ 0.79
SNAPC3-205ENST00000467062 BTDP43251 543 aa19.98■□□□□ 0.79
SNAPC3-205ENST00000467062 IFFO1Q0D2I5 559 aa19.98■□□□□ 0.79
SNAPC3-205ENST00000467062 IQCEQ6IPM2 695 aa19.98■□□□□ 0.79
SNAPC3-205ENST00000467062 DGKHQ86XP1 1220 aa19.98■□□□□ 0.79
SNAPC3-205ENST00000467062 MAB21L3Q8N8X9 362 aa19.98■□□□□ 0.79
SNAPC3-205ENST00000467062 PCDHA6Q9UN73 950 aa19.98■□□□□ 0.79
SNAPC3-205ENST00000467062 PCDHA8Q9Y5H6 950 aa19.98■□□□□ 0.79
SNAPC3-205ENST00000467062 SCN7AQ01118 1682 aa19.98■□□□□ 0.79
SNAPC3-205ENST00000467062 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.98■□□□□ 0.79
SNAPC3-205ENST00000467062 TRIM49BA6NDI0 452 aa19.98■□□□□ 0.79
SNAPC3-205ENST00000467062 PSMD14O00487 310 aa19.98■□□□□ 0.79
SNAPC3-205ENST00000467062 ZMYND10O75800 440 aa19.98■□□□□ 0.79
SNAPC3-205ENST00000467062 MYBL2P10244 700 aa19.98■□□□□ 0.79
SNAPC3-205ENST00000467062 CYB5D1Q6P9G0 228 aa19.98■□□□□ 0.79
SNAPC3-205ENST00000467062 GSPT2Q8IYD1 628 aaKnown RBP19.98■□□□□ 0.79
SNAPC3-205ENST00000467062 FRMD3A2A2Y4 597 aa19.97■□□□□ 0.79
SNAPC3-205ENST00000467062 UBAP1LF5GYI3 381 aa19.97■□□□□ 0.79
SNAPC3-205ENST00000467062 BAG3O95817 575 aa19.97■□□□□ 0.79
SNAPC3-205ENST00000467062 RASA1P20936 1047 aa19.97■□□□□ 0.79
SNAPC3-205ENST00000467062 FXR1P51114 621 aaKnown RBP eCLIP19.97■□□□□ 0.79
SNAPC3-205ENST00000467062 RWDD2BP57060 319 aa19.97■□□□□ 0.79
SNAPC3-205ENST00000467062 PRR5LQ6MZQ0 368 aa19.97■□□□□ 0.79
SNAPC3-205ENST00000467062 SND1Q7KZF4 910 aaKnown RBP eCLIP19.97■□□□□ 0.79
SNAPC3-205ENST00000467062 ZNF473Q8WTR7 871 aaKnown RBP19.97■□□□□ 0.79
SNAPC3-205ENST00000467062 RUBCNQ92622 972 aa19.97■□□□□ 0.79
SNAPC3-205ENST00000467062 ITFG2Q969R8 447 aa19.97■□□□□ 0.79
SNAPC3-205ENST00000467062 TAB2Q9NYJ8 693 aa19.97■□□□□ 0.79
SNAPC3-205ENST00000467062 MPHOSPH10O00566 681 aaKnown RBP19.97■□□□□ 0.79
SNAPC3-205ENST00000467062 ABL1P00519 1130 aa19.97■□□□□ 0.79
SNAPC3-205ENST00000467062 CDKAL1Q5VV42 579 aa19.97■□□□□ 0.79
SNAPC3-205ENST00000467062 LRRC15Q8TF66 581 aa19.97■□□□□ 0.79
SNAPC3-205ENST00000467062 RPGRQ92834 1020 aaKnown RBP19.97■□□□□ 0.79
SNAPC3-205ENST00000467062 UBA5Q9GZZ9 404 aa19.97■□□□□ 0.79
SNAPC3-205ENST00000467062 KLRF2D3W0D1 207 aa19.96■□□□□ 0.79
SNAPC3-205ENST00000467062 PDHBP11177 359 aa19.96■□□□□ 0.79
SNAPC3-205ENST00000467062 LSP1P33241 339 aa19.96■□□□□ 0.79
SNAPC3-205ENST00000467062 STAT6P42226 847 aa19.96■□□□□ 0.79
SNAPC3-205ENST00000467062 KRT31Q15323 416 aa19.96■□□□□ 0.79
SNAPC3-205ENST00000467062 FILIP1LQ4L180 1135 aa19.96■□□□□ 0.79
SNAPC3-205ENST00000467062 CYP26C1Q6V0L0 522 aa19.96■□□□□ 0.79
SNAPC3-205ENST00000467062 SCLT1Q96NL6 688 aa19.96■□□□□ 0.79
SNAPC3-205ENST00000467062 CD209Q9NNX6 404 aa19.96■□□□□ 0.79
SNAPC3-205ENST00000467062 PDS5AQ29RF7 1337 aaKnown RBP19.96■□□□□ 0.79
SNAPC3-205ENST00000467062 F8W031 263 aaPredicted RBP19.96■□□□□ 0.79
SNAPC3-205ENST00000467062 N4BP3O15049 544 aa19.96■□□□□ 0.79
SNAPC3-205ENST00000467062 HSF2BPO75031 334 aa19.96■□□□□ 0.79
SNAPC3-205ENST00000467062 PRCPP42785 496 aa19.96■□□□□ 0.79
SNAPC3-205ENST00000467062 EIF6P56537 245 aaKnown RBP19.96■□□□□ 0.79
SNAPC3-205ENST00000467062 CCDC121Q6ZUS5 278 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms