RNA–Protein interactions for RNA: ENST00000467049.1

PTPDC1-203, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

TSL 2

Gene PTPDC1, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-203ENST00000467049 PTPDC1A2A3K4 754 aa10.55□□□□□ -0.72
PTPDC1-203ENST00000467049 A6NJR5 290 aa10.55□□□□□ -0.72
PTPDC1-203ENST00000467049 B4DLN1 442 aa10.55□□□□□ -0.72
PTPDC1-203ENST00000467049 KIF28PB7ZC32 967 aa10.55□□□□□ -0.72
PTPDC1-203ENST00000467049 IQCF3P0C7M6 154 aa10.55□□□□□ -0.72
PTPDC1-203ENST00000467049 MRPL12P52815 198 aaKnown RBP10.55□□□□□ -0.72
PTPDC1-203ENST00000467049 PDE4DQ08499 809 aa10.55□□□□□ -0.72
PTPDC1-203ENST00000467049 RNF207Q6ZRF8 634 aa10.55□□□□□ -0.72
PTPDC1-203ENST00000467049 HERC6Q8IVU3 1022 aa10.55□□□□□ -0.72
PTPDC1-203ENST00000467049 NECAB3Q96P71 396 aaPredicted RBP10.55□□□□□ -0.72
PTPDC1-203ENST00000467049 INCENPQ9NQS7 918 aa10.55□□□□□ -0.72
PTPDC1-203ENST00000467049 CHD9Q3L8U1 2897 aa10.55□□□□□ -0.72
PTPDC1-203ENST00000467049 ZMYM6O95789 1325 aa10.54□□□□□ -0.72
PTPDC1-203ENST00000467049 MX1P20591 662 aa10.54□□□□□ -0.72
PTPDC1-203ENST00000467049 SLC16A2P36021 539 aa10.54□□□□□ -0.72
PTPDC1-203ENST00000467049 TFF2Q03403 129 aa10.54□□□□□ -0.72
PTPDC1-203ENST00000467049 TAP1Q03518 808 aa10.54□□□□□ -0.72
PTPDC1-203ENST00000467049 SKIV2LQ15477 1246 aaKnown RBP10.54□□□□□ -0.72
PTPDC1-203ENST00000467049 FAM47CQ5HY64 1035 aa10.54□□□□□ -0.72
PTPDC1-203ENST00000467049 CCDC155Q8N6L0 562 aa10.54□□□□□ -0.72
PTPDC1-203ENST00000467049 FAM122AQ96E09 287 aa10.54□□□□□ -0.72
PTPDC1-203ENST00000467049 TMEM47Q9BQJ4 181 aa10.54□□□□□ -0.72
PTPDC1-203ENST00000467049 GPCPD1Q9NPB8 672 aa10.54□□□□□ -0.72
PTPDC1-203ENST00000467049 MTMR7Q9Y216 660 aa10.54□□□□□ -0.72
PTPDC1-203ENST00000467049 ARIH1Q9Y4X5 557 aaPredicted RBP10.54□□□□□ -0.72
PTPDC1-203ENST00000467049 FRMPD2Q68DX3 1309 aaPredicted RBP10.53□□□□□ -0.72
PTPDC1-203ENST00000467049 SALL3Q9BXA9 1300 aa10.53□□□□□ -0.72
PTPDC1-203ENST00000467049 EPOPA6NHQ4 379 aa10.53□□□□□ -0.72
PTPDC1-203ENST00000467049 RFXAPO00287 272 aa10.53□□□□□ -0.72
PTPDC1-203ENST00000467049 PDHBP11177 359 aa10.53□□□□□ -0.72
PTPDC1-203ENST00000467049 CALML3P27482 149 aa10.53□□□□□ -0.72
PTPDC1-203ENST00000467049 KCNQ1P51787 676 aa10.53□□□□□ -0.72
PTPDC1-203ENST00000467049 SESTD1Q86VW0 696 aa10.53□□□□□ -0.72
PTPDC1-203ENST00000467049 TICAM2Q86XR7 235 aa10.53□□□□□ -0.72
PTPDC1-203ENST00000467049 RGS22Q8NE09 1264 aa10.53□□□□□ -0.72
PTPDC1-203ENST00000467049 CAGE1Q8TC20 777 aa10.53□□□□□ -0.72
PTPDC1-203ENST00000467049 OTUD7AQ8TE49 926 aaPredicted RBP10.53□□□□□ -0.72
PTPDC1-203ENST00000467049 HELLSQ9NRZ9 838 aa10.53□□□□□ -0.72
PTPDC1-203ENST00000467049 PARNO95453 639 aaKnown RBP10.53□□□□□ -0.72
PTPDC1-203ENST00000467049 SNHG28P0DPA3 235 aa10.53□□□□□ -0.72
PTPDC1-203ENST00000467049 PCP11498 1178 aaKnown RBP10.53□□□□□ -0.72
PTPDC1-203ENST00000467049 RPS6P62753 249 aaKnown RBP10.53□□□□□ -0.72
PTPDC1-203ENST00000467049 RBL2Q08999 1139 aa10.53□□□□□ -0.72
PTPDC1-203ENST00000467049 ZNF543Q08ER8 600 aa10.53□□□□□ -0.72
PTPDC1-203ENST00000467049 VPS53Q5VIR6 699 aa10.53□□□□□ -0.72
PTPDC1-203ENST00000467049 AFAP1L1Q8TED9 768 aa10.53□□□□□ -0.72
PTPDC1-203ENST00000467049 EVI5LQ96CN4 794 aa10.53□□□□□ -0.72
PTPDC1-203ENST00000467049 FTOQ9C0B1 505 aaKnown RBP eCLIP10.53□□□□□ -0.72
PTPDC1-203ENST00000467049 LMCD1Q9NZU5 365 aa10.53□□□□□ -0.72
PTPDC1-203ENST00000467049 VCANP13611 3396 aa10.52□□□□□ -0.72
PTPDC1-203ENST00000467049 MICAL3Q7RTP6 2002 aa10.52□□□□□ -0.72
PTPDC1-203ENST00000467049 TLL1O43897 1013 aa10.52□□□□□ -0.73
PTPDC1-203ENST00000467049 ARHGEF15O94989 841 aa10.52□□□□□ -0.73
PTPDC1-203ENST00000467049 TXNP10599 105 aaKnown RBP10.52□□□□□ -0.73
PTPDC1-203ENST00000467049 KCNJ6P48051 423 aa10.52□□□□□ -0.73
PTPDC1-203ENST00000467049 GRB10Q13322 594 aa10.52□□□□□ -0.73
PTPDC1-203ENST00000467049 ARNTL2Q8WYA1 636 aa10.52□□□□□ -0.73
PTPDC1-203ENST00000467049 COPS5Q92905 334 aa10.52□□□□□ -0.73
PTPDC1-203ENST00000467049 TTC14Q96N46 770 aa10.52□□□□□ -0.73
PTPDC1-203ENST00000467049 CERS4Q9HA82 394 aa10.52□□□□□ -0.73
PTPDC1-203ENST00000467049 NOD1Q9Y239 953 aa10.52□□□□□ -0.73
PTPDC1-203ENST00000467049 CCDC62Q6P9F0 684 aa10.51□□□□□ -0.73
PTPDC1-203ENST00000467049 HLA-CQ95604 372 aa10.51□□□□□ -0.73
PTPDC1-203ENST00000467049 TOMM22Q9NS69 142 aa10.51□□□□□ -0.73
PTPDC1-203ENST00000467049 LPXNO60711 386 aa10.51□□□□□ -0.73
PTPDC1-203ENST00000467049 ARIH2O95376 493 aa10.51□□□□□ -0.73
PTPDC1-203ENST00000467049 GH1P01241 217 aa10.51□□□□□ -0.73
PTPDC1-203ENST00000467049 FGAP02671 866 aa10.51□□□□□ -0.73
PTPDC1-203ENST00000467049 CXCL10P02778 98 aa10.51□□□□□ -0.73
PTPDC1-203ENST00000467049 MMP3P08254 477 aa10.51□□□□□ -0.73
PTPDC1-203ENST00000467049 SELPP16109 830 aa10.51□□□□□ -0.73
PTPDC1-203ENST00000467049 NT5C2P49902 561 aa10.51□□□□□ -0.73
PTPDC1-203ENST00000467049 WDR5P61964 334 aaKnown RBP10.51□□□□□ -0.73
PTPDC1-203ENST00000467049 PTGISQ16647 500 aa10.51□□□□□ -0.73
PTPDC1-203ENST00000467049 RRP12Q5JTH9 1297 aaKnown RBP10.51□□□□□ -0.73
PTPDC1-203ENST00000467049 GPATCH4Q5T3I0 446 aaKnown RBP10.51□□□□□ -0.73
PTPDC1-203ENST00000467049 CNKSR3Q6P9H4 555 aa10.51□□□□□ -0.73
PTPDC1-203ENST00000467049 CHD7Q9P2D1 2997 aa10.51□□□□□ -0.73
PTPDC1-203ENST00000467049 PCDHB15Q9Y5E8 787 aa10.51□□□□□ -0.73
PTPDC1-203ENST00000467049 EFCAB14O75071 495 aa10.5□□□□□ -0.73
PTPDC1-203ENST00000467049 ARHGAP1Q07960 439 aa10.5□□□□□ -0.73
PTPDC1-203ENST00000467049 MCMDC2Q4G0Z9 681 aa10.5□□□□□ -0.73
PTPDC1-203ENST00000467049 KRT40Q6A162 431 aa10.5□□□□□ -0.73
PTPDC1-203ENST00000467049 LRRC8DQ7L1W4 858 aa10.5□□□□□ -0.73
PTPDC1-203ENST00000467049 AFG1LQ8WV93 481 aa10.5□□□□□ -0.73
PTPDC1-203ENST00000467049 CTAGE1Q96RT6 745 aa10.5□□□□□ -0.73
PTPDC1-203ENST00000467049 LRFN3Q9BTN0 628 aa10.5□□□□□ -0.73
PTPDC1-203ENST00000467049 ABCB11O95342 1321 aa10.5□□□□□ -0.73
PTPDC1-203ENST00000467049 ABHD14A-ACY1A0A1B0GW23 586 aa10.49□□□□□ -0.73
PTPDC1-203ENST00000467049 GPNMBQ14956 572 aa10.49□□□□□ -0.73
PTPDC1-203ENST00000467049 GDF6Q6KF10 455 aaPredicted RBP10.49□□□□□ -0.73
PTPDC1-203ENST00000467049 PPP1R13LQ8WUF5 828 aa10.49□□□□□ -0.73
PTPDC1-203ENST00000467049 DHX38Q92620 1227 aaKnown RBP10.49□□□□□ -0.73
PTPDC1-203ENST00000467049 KAT2BQ92831 832 aa10.49□□□□□ -0.73
PTPDC1-203ENST00000467049 IWS1Q96ST2 819 aa10.49□□□□□ -0.73
PTPDC1-203ENST00000467049 EPHX3Q9H6B9 360 aa10.49□□□□□ -0.73
PTPDC1-203ENST00000467049 HCN4Q9Y3Q4 1203 aa10.49□□□□□ -0.73
PTPDC1-203ENST00000467049 NLRC5Q86WI3 1866 aa10.49□□□□□ -0.73
PTPDC1-203ENST00000467049 BRWD1Q9NSI6 2320 aa10.49□□□□□ -0.73
PTPDC1-203ENST00000467049 RALGAPA2Q2PPJ7 1873 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms