RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 GTF2IRD1Q9UHL9 959 aa6.75□□□□□ -1.33
CXXC4-202ENST00000466963 ANAPC4Q9UJX5 808 aa6.75□□□□□ -1.33
CXXC4-202ENST00000466963 GRIN2DO15399 1336 aa6.74□□□□□ -1.33
CXXC4-202ENST00000466963 ZNF532Q9HCE3 1301 aa6.74□□□□□ -1.33
CXXC4-202ENST00000466963 PCNTO95613 3336 aa6.74□□□□□ -1.33
CXXC4-202ENST00000466963 ACRP10323 421 aa6.74□□□□□ -1.33
CXXC4-202ENST00000466963 TAL1P17542 331 aaPredicted RBP6.74□□□□□ -1.33
CXXC4-202ENST00000466963 HOXC8P31273 242 aa6.74□□□□□ -1.33
CXXC4-202ENST00000466963 PDE4DQ08499 809 aa6.74□□□□□ -1.33
CXXC4-202ENST00000466963 AXDND1Q5T1B0 1012 aaPredicted RBP6.74□□□□□ -1.33
CXXC4-202ENST00000466963 OTOP2Q7RTS6 562 aa6.74□□□□□ -1.33
CXXC4-202ENST00000466963 ARNTL2Q8WYA1 636 aa6.74□□□□□ -1.33
CXXC4-202ENST00000466963 CLP1Q92989 425 aaKnown RBP6.74□□□□□ -1.33
CXXC4-202ENST00000466963 TRERF1Q96PN7 1200 aa6.74□□□□□ -1.33
CXXC4-202ENST00000466963 A1CFQ9NQ94 594 aaKnown RBP6.74□□□□□ -1.33
CXXC4-202ENST00000466963 ASTN1O14525 1302 aa6.74□□□□□ -1.33
CXXC4-202ENST00000466963 DYNC1LI2O43237 492 aaPredicted RBP6.74□□□□□ -1.33
CXXC4-202ENST00000466963 ORC4O43929 436 aa6.74□□□□□ -1.33
CXXC4-202ENST00000466963 PPFIA4O75335 1185 aa6.74□□□□□ -1.33
CXXC4-202ENST00000466963 PGK2P07205 417 aa6.74□□□□□ -1.33
CXXC4-202ENST00000466963 STAG3L1P0CL83 205 aa6.74□□□□□ -1.33
CXXC4-202ENST00000466963 GIT2Q14161 759 aa6.74□□□□□ -1.33
CXXC4-202ENST00000466963 ALX1Q15699 326 aa6.74□□□□□ -1.33
CXXC4-202ENST00000466963 CCDC85BQ15834 202 aaPredicted RBP6.74□□□□□ -1.33
CXXC4-202ENST00000466963 SLFN13Q68D06 897 aa6.74□□□□□ -1.33
CXXC4-202ENST00000466963 ELMSAN1Q6PJG2 1045 aa6.74□□□□□ -1.33
CXXC4-202ENST00000466963 RSPH3Q86UC2 560 aa6.74□□□□□ -1.33
CXXC4-202ENST00000466963 PLCD3Q8N3E9 789 aa6.74□□□□□ -1.33
CXXC4-202ENST00000466963 PPTC7Q8NI37 304 aa6.74□□□□□ -1.33
CXXC4-202ENST00000466963 NXPE3Q969Y0 559 aa6.74□□□□□ -1.33
CXXC4-202ENST00000466963 WDR11Q9BZH6 1224 aa6.74□□□□□ -1.33
CXXC4-202ENST00000466963 PAG1Q9NWQ8 432 aa6.74□□□□□ -1.33
CXXC4-202ENST00000466963 SOWAHBA6NEL2 793 aa6.74□□□□□ -1.33
CXXC4-202ENST00000466963 MBTPS2O43462 519 aa6.74□□□□□ -1.33
CXXC4-202ENST00000466963 IFIT2P09913 472 aaKnown RBP6.74□□□□□ -1.33
CXXC4-202ENST00000466963 RASA1P20936 1047 aa6.74□□□□□ -1.33
CXXC4-202ENST00000466963 PLEKHG4Q58EX7 1191 aa6.74□□□□□ -1.33
CXXC4-202ENST00000466963 CXCL17Q6UXB2 119 aa6.74□□□□□ -1.33
CXXC4-202ENST00000466963 PPM1EQ8WY54 764 aa6.74□□□□□ -1.33
CXXC4-202ENST00000466963 APPBP2Q92624 585 aa6.74□□□□□ -1.33
CXXC4-202ENST00000466963 RTP3Q9BQQ7 232 aa6.74□□□□□ -1.33
CXXC4-202ENST00000466963 IER2Q9BTL4 223 aa6.74□□□□□ -1.33
CXXC4-202ENST00000466963 CCER2I3L3R5 266 aa6.73□□□□□ -1.33
CXXC4-202ENST00000466963 FGRP09769 529 aa6.73□□□□□ -1.33
CXXC4-202ENST00000466963 GPM6BQ13491 265 aa6.73□□□□□ -1.33
CXXC4-202ENST00000466963 PTGISQ16647 500 aa6.73□□□□□ -1.33
CXXC4-202ENST00000466963 TAF2Q6P1X5 1199 aa6.73□□□□□ -1.33
CXXC4-202ENST00000466963 NOL8Q76FK4 1167 aaKnown RBP6.73□□□□□ -1.33
CXXC4-202ENST00000466963 PHF7Q9BWX1 381 aaPredicted RBP6.73□□□□□ -1.33
CXXC4-202ENST00000466963 SUGCTQ9HAC7 445 aa6.73□□□□□ -1.33
CXXC4-202ENST00000466963 SMCHD1A6NHR9 2005 aa6.73□□□□□ -1.33
CXXC4-202ENST00000466963 MYADML2A6NDP7 307 aa6.73□□□□□ -1.33
CXXC4-202ENST00000466963 GRXCR1A8MXD5 290 aa6.73□□□□□ -1.33
CXXC4-202ENST00000466963 F2P00734 622 aa6.73□□□□□ -1.33
CXXC4-202ENST00000466963 CTR9Q6PD62 1173 aa6.73□□□□□ -1.33
CXXC4-202ENST00000466963 KIAA1211Q6ZU35 1233 aa6.73□□□□□ -1.33
CXXC4-202ENST00000466963 TMEM192Q8IY95 271 aa6.73□□□□□ -1.33
CXXC4-202ENST00000466963 TOP1MTQ969P6 601 aa6.73□□□□□ -1.33
CXXC4-202ENST00000466963 DZANK1Q9NVP4 752 aa6.73□□□□□ -1.33
CXXC4-202ENST00000466963 NLRC5Q86WI3 1866 aa6.73□□□□□ -1.33
CXXC4-202ENST00000466963 MYO5AQ9Y4I1 1855 aaKnown RBP6.73□□□□□ -1.33
CXXC4-202ENST00000466963 HOXA2O43364 376 aa6.72□□□□□ -1.33
CXXC4-202ENST00000466963 GFRA3O60609 400 aa6.72□□□□□ -1.33
CXXC4-202ENST00000466963 ADAM15Q13444 863 aa6.72□□□□□ -1.33
CXXC4-202ENST00000466963 NONOQ15233 471 aaKnown RBP eCLIP6.72□□□□□ -1.33
CXXC4-202ENST00000466963 ZC3H14Q6PJT7 736 aaKnown RBP6.72□□□□□ -1.33
CXXC4-202ENST00000466963 FBXO11Q86XK2 927 aa6.72□□□□□ -1.33
CXXC4-202ENST00000466963 ZDHHC14Q8IZN3 488 aa6.72□□□□□ -1.33
CXXC4-202ENST00000466963 FIBCD1Q8N539 461 aa6.72□□□□□ -1.33
CXXC4-202ENST00000466963 NSUN6Q8TEA1 469 aaKnown RBP6.72□□□□□ -1.33
CXXC4-202ENST00000466963 VWCEQ96DN2 955 aa6.72□□□□□ -1.33
CXXC4-202ENST00000466963 IL17RAQ96F46 866 aa6.72□□□□□ -1.33
CXXC4-202ENST00000466963 TRPV6Q9H1D0 765 aa6.72□□□□□ -1.33
CXXC4-202ENST00000466963 MICAL3Q7RTP6 2002 aa6.72□□□□□ -1.33
CXXC4-202ENST00000466963 CCDC171Q6TFL3 1326 aa6.72□□□□□ -1.33
CXXC4-202ENST00000466963 PATL2C9JE40 543 aaKnown RBP6.72□□□□□ -1.33
CXXC4-202ENST00000466963 EIF3JO75822 258 aaKnown RBP6.72□□□□□ -1.33
CXXC4-202ENST00000466963 MYL3P08590 195 aa6.72□□□□□ -1.33
CXXC4-202ENST00000466963 SLC1A4P43007 532 aa6.72□□□□□ -1.33
CXXC4-202ENST00000466963 MFAP1P55081 439 aaKnown RBP6.72□□□□□ -1.33
CXXC4-202ENST00000466963 TRIM71Q2Q1W2 868 aaKnown RBP6.72□□□□□ -1.33
CXXC4-202ENST00000466963 TPRNQ4KMQ1 711 aa6.72□□□□□ -1.33
CXXC4-202ENST00000466963 USTQ9Y2C2 406 aa6.72□□□□□ -1.33
CXXC4-202ENST00000466963 MRPL11Q9Y3B7 192 aaKnown RBP6.72□□□□□ -1.33
CXXC4-202ENST00000466963 SLC4A4Q9Y6R1 1079 aa6.72□□□□□ -1.33
CXXC4-202ENST00000466963 STXBP3O00186 592 aa6.72□□□□□ -1.33
CXXC4-202ENST00000466963 TOP1P11387 765 aaKnown RBP6.72□□□□□ -1.33
CXXC4-202ENST00000466963 BMPR1AP36894 532 aa6.72□□□□□ -1.33
CXXC4-202ENST00000466963 CCL23P55773 120 aa6.72□□□□□ -1.33
CXXC4-202ENST00000466963 STXBP2Q15833 593 aa6.72□□□□□ -1.33
CXXC4-202ENST00000466963 AACSQ86V21 672 aa6.72□□□□□ -1.33
CXXC4-202ENST00000466963 SERINC5Q86VE9 423 aa6.72□□□□□ -1.33
CXXC4-202ENST00000466963 C7orf31Q8N865 590 aa6.72□□□□□ -1.33
CXXC4-202ENST00000466963 MIGA1Q8NAN2 632 aa6.72□□□□□ -1.33
CXXC4-202ENST00000466963 EAF2Q96CJ1 260 aaPredicted RBP6.72□□□□□ -1.33
CXXC4-202ENST00000466963 DPP7Q9UHL4 492 aa6.72□□□□□ -1.33
CXXC4-202ENST00000466963 NDUFB9Q9Y6M9 179 aa6.72□□□□□ -1.33
CXXC4-202ENST00000466963 TTC41PQ6P2S7 1318 aa6.71□□□□□ -1.33
CXXC4-202ENST00000466963 PTPRSQ13332 1948 aa6.71□□□□□ -1.33
CXXC4-202ENST00000466963 PRR5-ARHGAP8B1AHC4 643 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms