RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 DPP9Q86TI2 863 aa17.39■□□□□ 0.37
NPHP4-205ENST00000466897 NSUN6Q8TEA1 469 aaKnown RBP17.39■□□□□ 0.37
NPHP4-205ENST00000466897 TNFRSF25Q93038 417 aa17.39■□□□□ 0.37
NPHP4-205ENST00000466897 EHMT1Q9H9B1 1298 aa17.39■□□□□ 0.37
NPHP4-205ENST00000466897 FOXD4L1Q9NU39 408 aa17.39■□□□□ 0.37
NPHP4-205ENST00000466897 SOWAHBA6NEL2 793 aa17.38■□□□□ 0.37
NPHP4-205ENST00000466897 B4DLN1 442 aa17.38■□□□□ 0.37
NPHP4-205ENST00000466897 H3BQV1 296 aa17.38■□□□□ 0.37
NPHP4-205ENST00000466897 EDNRBP24530 442 aa17.38■□□□□ 0.37
NPHP4-205ENST00000466897 FLT3LGP49771 235 aa17.38■□□□□ 0.37
NPHP4-205ENST00000466897 ALDH5A1P51649 535 aaPredicted RBP17.38■□□□□ 0.37
NPHP4-205ENST00000466897 CNTN2Q02246 1040 aa17.38■□□□□ 0.37
NPHP4-205ENST00000466897 OLFML2BQ68BL8 750 aa17.38■□□□□ 0.37
NPHP4-205ENST00000466897 DIS3L2Q8IYB7 885 aaKnown RBP17.38■□□□□ 0.37
NPHP4-205ENST00000466897 MORC4Q8TE76 937 aa17.38■□□□□ 0.37
NPHP4-205ENST00000466897 MAML3Q96JK9 1138 aa17.38■□□□□ 0.37
NPHP4-205ENST00000466897 IWS1Q96ST2 819 aa17.38■□□□□ 0.37
NPHP4-205ENST00000466897 RMDN3Q96TC7 470 aa17.38■□□□□ 0.37
NPHP4-205ENST00000466897 MPHOSPH6Q99547 160 aaKnown RBP17.38■□□□□ 0.37
NPHP4-205ENST00000466897 PXMP2Q9NR77 195 aa17.38■□□□□ 0.37
NPHP4-205ENST00000466897 PCDHA6Q9UN73 950 aa17.38■□□□□ 0.37
NPHP4-205ENST00000466897 GABRQQ9UN88 632 aa17.38■□□□□ 0.37
NPHP4-205ENST00000466897 PCDHA8Q9Y5H6 950 aa17.38■□□□□ 0.37
NPHP4-205ENST00000466897 ASTN1O14525 1302 aa17.38■□□□□ 0.37
NPHP4-205ENST00000466897 ASB14A6NK59 587 aa17.37■□□□□ 0.37
NPHP4-205ENST00000466897 ADAMTS3O15072 1205 aa17.37■□□□□ 0.37
NPHP4-205ENST00000466897 U2AF2P26368 475 aaKnown RBP eCLIP17.37■□□□□ 0.37
NPHP4-205ENST00000466897 SREBF1P36956 1147 aa17.37■□□□□ 0.37
NPHP4-205ENST00000466897 XRRA1Q6P2D8 792 aa17.37■□□□□ 0.37
NPHP4-205ENST00000466897 KRT25Q7Z3Z0 450 aa17.37■□□□□ 0.37
NPHP4-205ENST00000466897 FCHSD1Q86WN1 690 aa17.37■□□□□ 0.37
NPHP4-205ENST00000466897 NPLOC4Q8TAT6 608 aa17.37■□□□□ 0.37
NPHP4-205ENST00000466897 PXYLP1Q8TE99 480 aa17.37■□□□□ 0.37
NPHP4-205ENST00000466897 TAAR1Q96RJ0 339 aa17.37■□□□□ 0.37
NPHP4-205ENST00000466897 PDCD2LQ9BRP1 358 aa17.37■□□□□ 0.37
NPHP4-205ENST00000466897 ANO3Q9BYT9 981 aa17.37■□□□□ 0.37
NPHP4-205ENST00000466897 BIN2Q9UBW5 565 aaPredicted RBP17.37■□□□□ 0.37
NPHP4-205ENST00000466897 DAXXQ9UER7 740 aaPredicted RBP17.37■□□□□ 0.37
NPHP4-205ENST00000466897 TRIM17Q9Y577 477 aa17.37■□□□□ 0.37
NPHP4-205ENST00000466897 SYNGAP1Q96PV0 1343 aa17.37■□□□□ 0.37
NPHP4-205ENST00000466897 BTBD18B2RXH4 712 aa17.36■□□□□ 0.37
NPHP4-205ENST00000466897 STX6O43752 255 aa17.36■□□□□ 0.37
NPHP4-205ENST00000466897 FOSBP53539 338 aa17.36■□□□□ 0.37
NPHP4-205ENST00000466897 GUCY1B3Q02153 619 aa17.36■□□□□ 0.37
NPHP4-205ENST00000466897 ARHGEF16Q5VV41 709 aa17.36■□□□□ 0.37
NPHP4-205ENST00000466897 CTU1Q7Z7A3 348 aaKnown RBP17.36■□□□□ 0.37
NPHP4-205ENST00000466897 OXER1Q8TDS5 423 aa17.36■□□□□ 0.37
NPHP4-205ENST00000466897 CRYGNQ8WXF5 182 aa17.36■□□□□ 0.37
NPHP4-205ENST00000466897 STAM2O75886 525 aa17.35■□□□□ 0.37
NPHP4-205ENST00000466897 CYP2B6P20813 491 aa17.35■□□□□ 0.37
NPHP4-205ENST00000466897 DDIT3P35638 169 aa17.35■□□□□ 0.37
NPHP4-205ENST00000466897 PGM5Q15124 567 aa17.35■□□□□ 0.37
NPHP4-205ENST00000466897 NONOQ15233 471 aaKnown RBP eCLIP17.35■□□□□ 0.37
NPHP4-205ENST00000466897 PKN2Q16513 984 aaKnown RBP17.35■□□□□ 0.37
NPHP4-205ENST00000466897 JAKMIP3Q5VZ66 844 aa17.35■□□□□ 0.37
NPHP4-205ENST00000466897 PCNX4Q63HM2 1172 aa17.35■□□□□ 0.37
NPHP4-205ENST00000466897 RASGRP4Q8TDF6 673 aa17.35■□□□□ 0.37
NPHP4-205ENST00000466897 IPO9Q96P70 1041 aaKnown RBP17.35■□□□□ 0.37
NPHP4-205ENST00000466897 TMEM260Q9NX78 707 aa17.35■□□□□ 0.37
NPHP4-205ENST00000466897 NRBP1Q9UHY1 535 aa17.35■□□□□ 0.37
NPHP4-205ENST00000466897 MTMR6Q9Y217 621 aa17.35■□□□□ 0.37
NPHP4-205ENST00000466897 CCDC194A0A1B0GVG4 234 aa17.34■□□□□ 0.37
NPHP4-205ENST00000466897 ECM2O94769 699 aaPredicted RBP17.34■□□□□ 0.37
NPHP4-205ENST00000466897 CYP3A4P08684 503 aa17.34■□□□□ 0.37
NPHP4-205ENST00000466897 NR5A1Q13285 461 aa17.34■□□□□ 0.37
NPHP4-205ENST00000466897 VSIG10LQ86VR7 867 aa17.34■□□□□ 0.37
NPHP4-205ENST00000466897 NOSTRINQ8IVI9 506 aa17.34■□□□□ 0.37
NPHP4-205ENST00000466897 TNS4Q8IZW8 715 aa17.34■□□□□ 0.37
NPHP4-205ENST00000466897 SPRYD3Q8NCJ5 442 aa17.34■□□□□ 0.37
NPHP4-205ENST00000466897 SLAIN1Q8ND83 568 aa17.34■□□□□ 0.37
NPHP4-205ENST00000466897 RAET1EQ8TD07 263 aa17.34■□□□□ 0.37
NPHP4-205ENST00000466897 PURBQ96QR8 312 aaKnown RBP17.34■□□□□ 0.37
NPHP4-205ENST00000466897 TINF2Q9BSI4 451 aa17.34■□□□□ 0.37
NPHP4-205ENST00000466897 PTPN22Q9Y2R2 807 aa17.34■□□□□ 0.37
NPHP4-205ENST00000466897 HTTP42858 3142 aa17.33■□□□□ 0.37
NPHP4-205ENST00000466897 VPS37CA5D8V6 355 aaPredicted RBP17.33■□□□□ 0.36
NPHP4-205ENST00000466897 NR3C2P08235 984 aa17.33■□□□□ 0.36
NPHP4-205ENST00000466897 EIF2AK2P19525 551 aaKnown RBP17.33■□□□□ 0.36
NPHP4-205ENST00000466897 CCND2P30279 289 aa17.33■□□□□ 0.36
NPHP4-205ENST00000466897 USP11P51784 963 aa17.33■□□□□ 0.36
NPHP4-205ENST00000466897 ARHGAP4P98171 946 aa17.33■□□□□ 0.36
NPHP4-205ENST00000466897 MOXD1Q6UVY6 613 aa17.33■□□□□ 0.36
NPHP4-205ENST00000466897 ARMCX2Q7L311 632 aa17.33■□□□□ 0.36
NPHP4-205ENST00000466897 BRAPQ7Z569 592 aa17.33■□□□□ 0.36
NPHP4-205ENST00000466897 TRIB2Q92519 343 aa17.33■□□□□ 0.36
NPHP4-205ENST00000466897 FLRT1Q9NZU1 646 aa17.33■□□□□ 0.36
NPHP4-205ENST00000466897 KIF28PB7ZC32 967 aa17.32■□□□□ 0.36
NPHP4-205ENST00000466897 ADCY3O60266 1144 aa17.32■□□□□ 0.36
NPHP4-205ENST00000466897 EIF3JO75822 258 aaKnown RBP17.32■□□□□ 0.36
NPHP4-205ENST00000466897 CIITAP33076 1130 aa17.32■□□□□ 0.36
NPHP4-205ENST00000466897 TRAPPC10P48553 1259 aa17.32■□□□□ 0.36
NPHP4-205ENST00000466897 GNL2Q13823 731 aaKnown RBP17.32■□□□□ 0.36
NPHP4-205ENST00000466897 STXBP2Q15833 593 aa17.32■□□□□ 0.36
NPHP4-205ENST00000466897 CCL14Q16627 93 aa17.32■□□□□ 0.36
NPHP4-205ENST00000466897 PIK3AP1Q6ZUJ8 805 aa17.32■□□□□ 0.36
NPHP4-205ENST00000466897 TBCKQ8TEA7 893 aa17.32■□□□□ 0.36
NPHP4-205ENST00000466897 NAP1L4Q99733 375 aaKnown RBP17.32■□□□□ 0.36
NPHP4-205ENST00000466897 ZSCAN16Q9H4T2 348 aaPredicted RBP17.32■□□□□ 0.36
NPHP4-205ENST00000466897 FRMPD3Q5JV73 1810 aa17.32■□□□□ 0.36
NPHP4-205ENST00000466897 HMGCRP04035 888 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms