RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 NOD1Q9Y239 953 aa17.22■□□□□ 0.35
MCF2L-220ENST00000464800 TRIP12Q14669 1992 aaPredicted RBP17.22■□□□□ 0.35
MCF2L-220ENST00000464800 TET1Q8NFU7 2136 aa17.21■□□□□ 0.35
MCF2L-220ENST00000464800 KIF28PB7ZC32 967 aa17.21■□□□□ 0.35
MCF2L-220ENST00000464800 MX1P20591 662 aa17.21■□□□□ 0.35
MCF2L-220ENST00000464800 TAP1Q03518 808 aa17.21■□□□□ 0.35
MCF2L-220ENST00000464800 PTPN11Q06124 597 aaPredicted RBP17.21■□□□□ 0.35
MCF2L-220ENST00000464800 HERC6Q8IVU3 1022 aa17.21■□□□□ 0.35
MCF2L-220ENST00000464800 PPP1R13LQ8WUF5 828 aa17.21■□□□□ 0.35
MCF2L-220ENST00000464800 CLEC4DQ8WXI8 215 aa17.21■□□□□ 0.35
MCF2L-220ENST00000464800 GPCPD1Q9NPB8 672 aa17.21■□□□□ 0.35
MCF2L-220ENST00000464800 A6NJR5 290 aa17.2■□□□□ 0.34
MCF2L-220ENST00000464800 BAIAP3O94812 1187 aa17.2■□□□□ 0.34
MCF2L-220ENST00000464800 EDNRBP24530 442 aa17.2■□□□□ 0.34
MCF2L-220ENST00000464800 RRP12Q5JTH9 1297 aaKnown RBP17.2■□□□□ 0.34
MCF2L-220ENST00000464800 VPS53Q5VIR6 699 aa17.2■□□□□ 0.34
MCF2L-220ENST00000464800 KRT40Q6A162 431 aa17.2■□□□□ 0.34
MCF2L-220ENST00000464800 CCDC155Q8N6L0 562 aa17.2■□□□□ 0.34
MCF2L-220ENST00000464800 DNERQ8NFT8 737 aa17.2■□□□□ 0.34
MCF2L-220ENST00000464800 TMEM47Q9BQJ4 181 aa17.2■□□□□ 0.34
MCF2L-220ENST00000464800 KIAA1217Q5T5P2 1943 aa17.19■□□□□ 0.34
MCF2L-220ENST00000464800 B4DLN1 442 aa17.19■□□□□ 0.34
MCF2L-220ENST00000464800 ARHGEF15O94989 841 aa17.19■□□□□ 0.34
MCF2L-220ENST00000464800 FGRP09769 529 aa17.19■□□□□ 0.34
MCF2L-220ENST00000464800 TXNP10599 105 aaKnown RBP17.19■□□□□ 0.34
MCF2L-220ENST00000464800 PDHBP11177 359 aa17.19■□□□□ 0.34
MCF2L-220ENST00000464800 KCNJ6P48051 423 aa17.19■□□□□ 0.34
MCF2L-220ENST00000464800 MRPL12P52815 198 aaKnown RBP17.19■□□□□ 0.34
MCF2L-220ENST00000464800 RPS6P62753 249 aaKnown RBP17.19■□□□□ 0.34
MCF2L-220ENST00000464800 COPS5Q92905 334 aa17.19■□□□□ 0.34
MCF2L-220ENST00000464800 WDR19Q8NEZ3 1342 aa17.19■□□□□ 0.34
MCF2L-220ENST00000464800 XIRP2A4UGR9 3374 aa17.19■□□□□ 0.34
MCF2L-220ENST00000464800 TLL1O43897 1013 aa17.18■□□□□ 0.34
MCF2L-220ENST00000464800 CHMP4BP1P59074 171 aa17.18■□□□□ 0.34
MCF2L-220ENST00000464800 ALX1Q15699 326 aa17.18■□□□□ 0.34
MCF2L-220ENST00000464800 PTGISQ16647 500 aa17.18■□□□□ 0.34
MCF2L-220ENST00000464800 CAGE1Q8TC20 777 aa17.18■□□□□ 0.34
MCF2L-220ENST00000464800 HLA-CQ95604 372 aa17.18■□□□□ 0.34
MCF2L-220ENST00000464800 TCP11L1Q9NUJ3 509 aa17.18■□□□□ 0.34
MCF2L-220ENST00000464800 SIP14410 1827 aa17.17■□□□□ 0.34
MCF2L-220ENST00000464800 ZNF543Q08ER8 600 aa17.17■□□□□ 0.34
MCF2L-220ENST00000464800 GRB10Q13322 594 aa17.17■□□□□ 0.34
MCF2L-220ENST00000464800 AFAP1L1Q8TED9 768 aa17.17■□□□□ 0.34
MCF2L-220ENST00000464800 MYH6P13533 1939 aa17.17■□□□□ 0.34
MCF2L-220ENST00000464800 ARIH2O95376 493 aa17.16■□□□□ 0.34
MCF2L-220ENST00000464800 EVI5LQ96CN4 794 aa17.16■□□□□ 0.34
MCF2L-220ENST00000464800 HELLSQ9NRZ9 838 aa17.16■□□□□ 0.34
MCF2L-220ENST00000464800 HCN4Q9Y3Q4 1203 aa17.16■□□□□ 0.34
MCF2L-220ENST00000464800 LAMA4Q16363 1823 aa17.15■□□□□ 0.34
MCF2L-220ENST00000464800 MMP3P08254 477 aa17.15■□□□□ 0.34
MCF2L-220ENST00000464800 WDR5P61964 334 aaKnown RBP17.15■□□□□ 0.34
MCF2L-220ENST00000464800 USH1GQ495M9 461 aa17.15■□□□□ 0.34
MCF2L-220ENST00000464800 SESTD1Q86VW0 696 aa17.15■□□□□ 0.34
MCF2L-220ENST00000464800 AFG1LQ8WV93 481 aa17.15■□□□□ 0.34
MCF2L-220ENST00000464800 ZBED2Q9BTP6 218 aa17.15■□□□□ 0.34
MCF2L-220ENST00000464800 EPHX3Q9H6B9 360 aa17.15■□□□□ 0.34
MCF2L-220ENST00000464800 ZBTB47Q9UFB7 747 aaPredicted RBP17.15■□□□□ 0.34
MCF2L-220ENST00000464800 ZMYM6O95789 1325 aa17.15■□□□□ 0.34
MCF2L-220ENST00000464800 SALL3Q9BXA9 1300 aa17.15■□□□□ 0.34
MCF2L-220ENST00000464800 LPXNO60711 386 aa17.14■□□□□ 0.33
MCF2L-220ENST00000464800 GH1P01241 217 aa17.14■□□□□ 0.33
MCF2L-220ENST00000464800 FGAP02671 866 aa17.14■□□□□ 0.33
MCF2L-220ENST00000464800 SNHG28P0DPA3 235 aa17.14■□□□□ 0.33
MCF2L-220ENST00000464800 SELPP16109 830 aa17.14■□□□□ 0.33
MCF2L-220ENST00000464800 GDF6Q6KF10 455 aaPredicted RBP17.14■□□□□ 0.33
MCF2L-220ENST00000464800 LRRC8DQ7L1W4 858 aa17.14■□□□□ 0.33
MCF2L-220ENST00000464800 SPRED2Q7Z698 418 aa17.14■□□□□ 0.33
MCF2L-220ENST00000464800 GDPD5Q8WTR4 605 aa17.14■□□□□ 0.33
MCF2L-220ENST00000464800 TTC14Q96N46 770 aa17.14■□□□□ 0.33
MCF2L-220ENST00000464800 LRFN3Q9BTN0 628 aa17.14■□□□□ 0.33
MCF2L-220ENST00000464800 PCDHB15Q9Y5E8 787 aa17.14■□□□□ 0.33
MCF2L-220ENST00000464800 A0A0D9SFI3 127 aa17.13■□□□□ 0.33
MCF2L-220ENST00000464800 LCHNA4D1U4 455 aa17.13■□□□□ 0.33
MCF2L-220ENST00000464800 PARNO95453 639 aaKnown RBP17.13■□□□□ 0.33
MCF2L-220ENST00000464800 TMEM31Q5JXX7 168 aa17.13■□□□□ 0.33
MCF2L-220ENST00000464800 GPATCH4Q5T3I0 446 aaKnown RBP17.13■□□□□ 0.33
MCF2L-220ENST00000464800 CCDC62Q6P9F0 684 aa17.13■□□□□ 0.33
MCF2L-220ENST00000464800 CNKSR3Q6P9H4 555 aa17.13■□□□□ 0.33
MCF2L-220ENST00000464800 SEPT14Q6ZU15 432 aa17.13■□□□□ 0.33
MCF2L-220ENST00000464800 TMCO2Q7Z6W1 182 aaPredicted RBP17.13■□□□□ 0.33
MCF2L-220ENST00000464800 RGS22Q8NE09 1264 aa17.13■□□□□ 0.33
MCF2L-220ENST00000464800 CTAGE1Q96RT6 745 aa17.13■□□□□ 0.33
MCF2L-220ENST00000464800 LMCD1Q9NZU5 365 aa17.13■□□□□ 0.33
MCF2L-220ENST00000464800 ARIH1Q9Y4X5 557 aaPredicted RBP17.13■□□□□ 0.33
MCF2L-220ENST00000464800 MYH7BA7E2Y1 1941 aa17.12■□□□□ 0.33
MCF2L-220ENST00000464800 HSPD1P10809 573 aaKnown RBP17.12■□□□□ 0.33
MCF2L-220ENST00000464800 PCP11498 1178 aaKnown RBP17.12■□□□□ 0.33
MCF2L-220ENST00000464800 CASTP20810 708 aaKnown RBP17.12■□□□□ 0.33
MCF2L-220ENST00000464800 HAND2P61296 217 aa17.12■□□□□ 0.33
MCF2L-220ENST00000464800 DEFB103AP81534 67 aa17.12■□□□□ 0.33
MCF2L-220ENST00000464800 ARHGAP1Q07960 439 aa17.12■□□□□ 0.33
MCF2L-220ENST00000464800 RBL2Q08999 1139 aa17.12■□□□□ 0.33
MCF2L-220ENST00000464800 LY6KQ17RY6 165 aa17.12■□□□□ 0.33
MCF2L-220ENST00000464800 MCMDC2Q4G0Z9 681 aa17.12■□□□□ 0.33
MCF2L-220ENST00000464800 MFSD6Q6ZSS7 791 aa17.12■□□□□ 0.33
MCF2L-220ENST00000464800 CHST3Q7LGC8 479 aa17.12■□□□□ 0.33
MCF2L-220ENST00000464800 DHX38Q92620 1227 aaKnown RBP17.12■□□□□ 0.33
MCF2L-220ENST00000464800 KAT2BQ92831 832 aa17.12■□□□□ 0.33
MCF2L-220ENST00000464800 FAM227BQ96M60 508 aa17.12■□□□□ 0.33
MCF2L-220ENST00000464800 MAF1Q9H063 256 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms