RNA–Protein interactions for RNA: ENST00000464553.2

SSNA1-204, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSNA1, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-204ENST00000464553 ARHGEF16Q5VV41 709 aa18.83■□□□□ 0.6
SSNA1-204ENST00000464553 EEPD1Q7L9B9 569 aa18.83■□□□□ 0.6
SSNA1-204ENST00000464553 HOMER1Q86YM7 354 aa18.83■□□□□ 0.6
SSNA1-204ENST00000464553 LENG1Q96BZ8 264 aaPredicted RBP18.83■□□□□ 0.6
SSNA1-204ENST00000464553 RBM28Q9NW13 759 aaKnown RBP18.83■□□□□ 0.6
SSNA1-204ENST00000464553 ZMYND8Q9ULU4 1186 aaPredicted RBP18.83■□□□□ 0.6
SSNA1-204ENST00000464553 ATP11BQ9Y2G3 1177 aa18.83■□□□□ 0.6
SSNA1-204ENST00000464553 DCDC2CA8MYV0 355 aa18.82■□□□□ 0.6
SSNA1-204ENST00000464553 NR3C2P08235 984 aa18.82■□□□□ 0.6
SSNA1-204ENST00000464553 CPT1AP50416 773 aa18.82■□□□□ 0.6
SSNA1-204ENST00000464553 CDK7P50613 346 aa18.82■□□□□ 0.6
SSNA1-204ENST00000464553 TLE2Q04725 743 aa18.82■□□□□ 0.6
SSNA1-204ENST00000464553 TTLL4Q14679 1199 aa18.82■□□□□ 0.6
SSNA1-204ENST00000464553 ADCK5Q3MIX3 580 aa18.82■□□□□ 0.6
SSNA1-204ENST00000464553 KCNV1Q6PIU1 500 aa18.82■□□□□ 0.6
SSNA1-204ENST00000464553 APOA5Q6Q788 366 aa18.82■□□□□ 0.6
SSNA1-204ENST00000464553 LBHD1Q9BQE6 289 aaPredicted RBP18.82■□□□□ 0.6
SSNA1-204ENST00000464553 RBM27Q9P2N5 1060 aaKnown RBP18.82■□□□□ 0.6
SSNA1-204ENST00000464553 A0A0U1RQG5 324 aaPredicted RBP18.81■□□□□ 0.6
SSNA1-204ENST00000464553 TRIM60Q495X7 471 aa18.81■□□□□ 0.6
SSNA1-204ENST00000464553 SRBD1Q8N5C6 995 aaKnown RBP18.81■□□□□ 0.6
SSNA1-204ENST00000464553 MYL10Q9BUA6 226 aa18.81■□□□□ 0.6
SSNA1-204ENST00000464553 PXMP2Q9NR77 195 aa18.81■□□□□ 0.6
SSNA1-204ENST00000464553 POLR3EQ9NVU0 708 aa18.81■□□□□ 0.6
SSNA1-204ENST00000464553 COL20A1Q9P218 1284 aa18.81■□□□□ 0.6
SSNA1-204ENST00000464553 SNX14Q9Y5W7 946 aa18.81■□□□□ 0.6
SSNA1-204ENST00000464553 CCDC196A0A1B0GTZ2 297 aa18.8■□□□□ 0.6
SSNA1-204ENST00000464553 MYADML2A6NDP7 307 aa18.8■□□□□ 0.6
SSNA1-204ENST00000464553 ARVCFO00192 962 aa18.8■□□□□ 0.6
SSNA1-204ENST00000464553 PIK3CDO00329 1044 aa18.8■□□□□ 0.6
SSNA1-204ENST00000464553 STAM2O75886 525 aa18.8■□□□□ 0.6
SSNA1-204ENST00000464553 TXNP10599 105 aaKnown RBP18.8■□□□□ 0.6
SSNA1-204ENST00000464553 SYN1P17600 705 aa18.8■□□□□ 0.6
SSNA1-204ENST00000464553 MAGEA10P43363 369 aaPredicted RBP18.8■□□□□ 0.6
SSNA1-204ENST00000464553 COL9A3Q14050 684 aaPredicted RBP18.8■□□□□ 0.6
SSNA1-204ENST00000464553 CCDC62Q6P9F0 684 aa18.8■□□□□ 0.6
SSNA1-204ENST00000464553 BLOC1S2Q6QNY1 142 aa18.8■□□□□ 0.6
SSNA1-204ENST00000464553 VSIG10LQ86VR7 867 aa18.8■□□□□ 0.6
SSNA1-204ENST00000464553 SLC43A3Q8NBI5 491 aa18.8■□□□□ 0.6
SSNA1-204ENST00000464553 VTI1AQ96AJ9 217 aa18.8■□□□□ 0.6
SSNA1-204ENST00000464553 ALPK3Q96L96 1907 aa18.8■□□□□ 0.6
SSNA1-204ENST00000464553 A6NJR5 290 aa18.79■□□□□ 0.6
SSNA1-204ENST00000464553 ZBTB43O43298 467 aa18.79■□□□□ 0.6
SSNA1-204ENST00000464553 TGFB3P10600 412 aa18.79■□□□□ 0.6
SSNA1-204ENST00000464553 FGD1P98174 961 aa18.79■□□□□ 0.6
SSNA1-204ENST00000464553 XRRA1Q6P2D8 792 aa18.79■□□□□ 0.6
SSNA1-204ENST00000464553 TMTC3Q6ZXV5 915 aa18.79■□□□□ 0.6
SSNA1-204ENST00000464553 CUL5Q93034 780 aa18.79■□□□□ 0.6
SSNA1-204ENST00000464553 PDCD2LQ9BRP1 358 aa18.79■□□□□ 0.6
SSNA1-204ENST00000464553 LRRC2Q9BYS8 371 aa18.79■□□□□ 0.6
SSNA1-204ENST00000464553 DDX49Q9Y6V7 483 aaKnown RBP18.79■□□□□ 0.6
SSNA1-204ENST00000464553 MCM3APO60318 1980 aa18.79■□□□□ 0.6
SSNA1-204ENST00000464553 hCG_1984214I3L0E3 225 aa18.78■□□□□ 0.6
SSNA1-204ENST00000464553 KIAA0355O15063 1070 aa18.78■□□□□ 0.6
SSNA1-204ENST00000464553 PLEKHA8P1O95397 391 aa18.78■□□□□ 0.6
SSNA1-204ENST00000464553 CLTBP09497 229 aa18.78■□□□□ 0.6
SSNA1-204ENST00000464553 BEX3Q00994 111 aa18.78■□□□□ 0.6
SSNA1-204ENST00000464553 MICU3Q86XE3 530 aa18.78■□□□□ 0.6
SSNA1-204ENST00000464553 ZNF713Q8N859 430 aaPredicted RBP18.78■□□□□ 0.6
SSNA1-204ENST00000464553 JAKMIP1Q96N16 626 aaKnown RBP18.78■□□□□ 0.6
SSNA1-204ENST00000464553 USP26Q9BXU7 913 aa18.78■□□□□ 0.6
SSNA1-204ENST00000464553 AGXT2Q9BYV1 514 aa18.78■□□□□ 0.6
SSNA1-204ENST00000464553 TM6SF1Q9BZW5 370 aa18.78■□□□□ 0.6
SSNA1-204ENST00000464553 PDLIM7Q9NR12 457 aa18.78■□□□□ 0.6
SSNA1-204ENST00000464553 LCTP09848 1927 aa18.77■□□□□ 0.6
SSNA1-204ENST00000464553 TLR3O15455 904 aaKnown RBP18.77■□□□□ 0.6
SSNA1-204ENST00000464553 EIF2AK2P19525 551 aaKnown RBP18.77■□□□□ 0.6
SSNA1-204ENST00000464553 PGM5Q15124 567 aa18.77■□□□□ 0.6
SSNA1-204ENST00000464553 RTN1Q16799 776 aa18.77■□□□□ 0.6
SSNA1-204ENST00000464553 OR6J1Q8NGC5 347 aa18.77■□□□□ 0.6
SSNA1-204ENST00000464553 UBE2OQ9C0C9 1292 aaKnown RBP18.77■□□□□ 0.6
SSNA1-204ENST00000464553 BRPF3Q9ULD4 1205 aa18.77■□□□□ 0.6
SSNA1-204ENST00000464553 CEP290O15078 2479 aa18.76■□□□□ 0.59
SSNA1-204ENST00000464553 GH1P01241 217 aa18.76■□□□□ 0.59
SSNA1-204ENST00000464553 RPS6KB1P23443 525 aa18.76■□□□□ 0.59
SSNA1-204ENST00000464553 CCND2P30279 289 aa18.76■□□□□ 0.59
SSNA1-204ENST00000464553 HOXA13P31271 388 aaPredicted RBP18.76■□□□□ 0.59
SSNA1-204ENST00000464553 EVCP57679 992 aa18.76■□□□□ 0.59
SSNA1-204ENST00000464553 IRX5P78411 483 aaPredicted RBP18.76■□□□□ 0.59
SSNA1-204ENST00000464553 FAAP100Q0VG06 881 aa18.76■□□□□ 0.59
SSNA1-204ENST00000464553 ITGA7Q13683 1181 aa18.76■□□□□ 0.59
SSNA1-204ENST00000464553 CXCL17Q6UXB2 119 aa18.76■□□□□ 0.59
SSNA1-204ENST00000464553 EMID1Q96A84 441 aaPredicted RBP18.76■□□□□ 0.59
SSNA1-204ENST00000464553 PSTPIP2Q9H939 334 aa18.76■□□□□ 0.59
SSNA1-204ENST00000464553 TMEM39AQ9NV64 488 aa18.76■□□□□ 0.59
SSNA1-204ENST00000464553 DDX41Q9UJV9 622 aaKnown RBP18.76■□□□□ 0.59
SSNA1-204ENST00000464553 FRMPD4Q14CM0 1322 aa18.75■□□□□ 0.59
SSNA1-204ENST00000464553 KLF18A0A0U1RQI7 1052 aa18.75■□□□□ 0.59
SSNA1-204ENST00000464553 PQBP1O60828 265 aaKnown RBP18.75■□□□□ 0.59
SSNA1-204ENST00000464553 RXRAP19793 462 aa18.75■□□□□ 0.59
SSNA1-204ENST00000464553 FXR1P51114 621 aaKnown RBP eCLIP18.75■□□□□ 0.59
SSNA1-204ENST00000464553 PURAQ00577 322 aaKnown RBP18.75■□□□□ 0.59
SSNA1-204ENST00000464553 LAMC2Q13753 1193 aa18.75■□□□□ 0.59
SSNA1-204ENST00000464553 TMEM63BQ5T3F8 832 aa18.75■□□□□ 0.59
SSNA1-204ENST00000464553 SEPT14Q6ZU15 432 aa18.75■□□□□ 0.59
SSNA1-204ENST00000464553 TDHQ8IZJ6 230 aa18.75■□□□□ 0.59
SSNA1-204ENST00000464553 MTG1Q9BT17 334 aaPredicted RBP18.75■□□□□ 0.59
SSNA1-204ENST00000464553 GLT8D2Q9H1C3 349 aa18.75■□□□□ 0.59
SSNA1-204ENST00000464553 ZSWIM6Q9HCJ5 1215 aa18.75■□□□□ 0.59
SSNA1-204ENST00000464553 LRRC37A2A6NM11 1700 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms