RNA–Protein interactions for RNA: ENST00000464526.1

LST1-220, leukocyte specific transcript 1, humanhuman

TSL 1 (best)

Gene LST1, Length 1,832 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-220ENST00000464526 RMDN3Q96TC7 470 aa20.1■□□□□ 0.81
LST1-220ENST00000464526 APBA2Q99767 749 aa20.1■□□□□ 0.81
LST1-220ENST00000464526 C6orf50Q9HD87 102 aa20.1■□□□□ 0.81
LST1-220ENST00000464526 PXMP2Q9NR77 195 aa20.1■□□□□ 0.81
LST1-220ENST00000464526 RPTORQ8N122 1335 aa20.09■□□□□ 0.81
LST1-220ENST00000464526 IGHA2P01877 340 aa20.09■□□□□ 0.81
LST1-220ENST00000464526 HOXC6P09630 235 aa20.09■□□□□ 0.81
LST1-220ENST00000464526 CYP2C19P33261 490 aa20.09■□□□□ 0.81
LST1-220ENST00000464526 FOXD4L5Q5VV16 416 aaPredicted RBP20.09■□□□□ 0.81
LST1-220ENST00000464526 LARP1BQ659C4 914 aaKnown RBP20.09■□□□□ 0.81
LST1-220ENST00000464526 FOXD4L4Q8WXT5 416 aaPredicted RBP20.09■□□□□ 0.81
LST1-220ENST00000464526 ANO3Q9BYT9 981 aa20.09■□□□□ 0.81
LST1-220ENST00000464526 FRMPD4Q14CM0 1322 aa20.09■□□□□ 0.81
LST1-220ENST00000464526 VPS37CA5D8V6 355 aaPredicted RBP20.09■□□□□ 0.81
LST1-220ENST00000464526 RGS2P41220 211 aa20.09■□□□□ 0.81
LST1-220ENST00000464526 MRPL12P52815 198 aaKnown RBP20.09■□□□□ 0.81
LST1-220ENST00000464526 TMEM63BQ5T3F8 832 aa20.09■□□□□ 0.81
LST1-220ENST00000464526 FERMT3Q86UX7 667 aa20.09■□□□□ 0.81
LST1-220ENST00000464526 CCDC12Q8WUD4 166 aaPredicted RBP20.09■□□□□ 0.81
LST1-220ENST00000464526 TRAF1Q13077 416 aa20.08■□□□□ 0.8
LST1-220ENST00000464526 PRAMEF19Q5SWL8 479 aa20.08■□□□□ 0.8
LST1-220ENST00000464526 EEPD1Q7L9B9 569 aa20.08■□□□□ 0.8
LST1-220ENST00000464526 SH3TC2Q8TF17 1288 aa20.08■□□□□ 0.8
LST1-220ENST00000464526 PDCD2LQ9BRP1 358 aa20.08■□□□□ 0.8
LST1-220ENST00000464526 MTMR6Q9Y217 621 aa20.08■□□□□ 0.8
LST1-220ENST00000464526 KRT2P35908 639 aa20.07■□□□□ 0.8
LST1-220ENST00000464526 TRIM29Q14134 588 aa20.07■□□□□ 0.8
LST1-220ENST00000464526 PGM5Q15124 567 aa20.07■□□□□ 0.8
LST1-220ENST00000464526 PIK3AP1Q6ZUJ8 805 aa20.07■□□□□ 0.8
LST1-220ENST00000464526 SNAI1O95863 264 aaPredicted RBP20.06■□□□□ 0.8
LST1-220ENST00000464526 GNA11P29992 359 aa20.06■□□□□ 0.8
LST1-220ENST00000464526 MRPS9P82933 396 aaKnown RBP20.06■□□□□ 0.8
LST1-220ENST00000464526 ARMCX2Q7L311 632 aa20.06■□□□□ 0.8
LST1-220ENST00000464526 FBXO16Q8IX29 292 aaPredicted RBP20.06■□□□□ 0.8
LST1-220ENST00000464526 CRYGNQ8WXF5 182 aa20.06■□□□□ 0.8
LST1-220ENST00000464526 UIMC1Q96RL1 719 aa20.06■□□□□ 0.8
LST1-220ENST00000464526 PTPN22Q9Y2R2 807 aa20.06■□□□□ 0.8
LST1-220ENST00000464526 RGS20O76081 388 aa20.06■□□□□ 0.8
LST1-220ENST00000464526 XBP1P17861 261 aa20.06■□□□□ 0.8
LST1-220ENST00000464526 EDNRBP24530 442 aa20.06■□□□□ 0.8
LST1-220ENST00000464526 DDIT3P35638 169 aa20.06■□□□□ 0.8
LST1-220ENST00000464526 NBR1Q14596 966 aa20.06■□□□□ 0.8
LST1-220ENST00000464526 INF2Q27J81 1249 aa20.06■□□□□ 0.8
LST1-220ENST00000464526 ARHGEF16Q5VV41 709 aa20.06■□□□□ 0.8
LST1-220ENST00000464526 FAM173BQ6P4H8 233 aa20.06■□□□□ 0.8
LST1-220ENST00000464526 TRPV1Q8NER1 839 aa20.06■□□□□ 0.8
LST1-220ENST00000464526 CYP2W1Q8TAV3 490 aa20.06■□□□□ 0.8
LST1-220ENST00000464526 RAET1EQ8TD07 263 aa20.06■□□□□ 0.8
LST1-220ENST00000464526 CHAMP1Q96JM3 812 aa20.06■□□□□ 0.8
LST1-220ENST00000464526 KATNBL1Q9H079 304 aa20.06■□□□□ 0.8
LST1-220ENST00000464526 SPDYE3A6NKU9 549 aa20.05■□□□□ 0.8
LST1-220ENST00000464526 ADCY6O43306 1168 aa20.05■□□□□ 0.8
LST1-220ENST00000464526 ADCY3O60266 1144 aa20.05■□□□□ 0.8
LST1-220ENST00000464526 MYCLP12524 364 aaPredicted RBP20.05■□□□□ 0.8
LST1-220ENST00000464526 CTU1Q7Z7A3 348 aaKnown RBP20.05■□□□□ 0.8
LST1-220ENST00000464526 LENG1Q96BZ8 264 aaPredicted RBP20.05■□□□□ 0.8
LST1-220ENST00000464526 TINF2Q9BSI4 451 aa20.05■□□□□ 0.8
LST1-220ENST00000464526 ZDHHC9Q9Y397 364 aa20.05■□□□□ 0.8
LST1-220ENST00000464526 H3BQV1 296 aa20.04■□□□□ 0.8
LST1-220ENST00000464526 MYCP01106 439 aaPredicted RBP20.04■□□□□ 0.8
LST1-220ENST00000464526 NR3C2P08235 984 aa20.04■□□□□ 0.8
LST1-220ENST00000464526 IRF5Q13568 498 aa20.04■□□□□ 0.8
LST1-220ENST00000464526 IFFO2Q5TF58 517 aa20.04■□□□□ 0.8
LST1-220ENST00000464526 MCTP1Q6DN14 999 aa20.04■□□□□ 0.8
LST1-220ENST00000464526 TBCKQ8TEA7 893 aa20.04■□□□□ 0.8
LST1-220ENST00000464526 PDGFCQ9NRA1 345 aa20.04■□□□□ 0.8
LST1-220ENST00000464526 DNAH12Q6ZR08 3092 aa20.04■□□□□ 0.8
LST1-220ENST00000464526 STX6O43752 255 aa20.04■□□□□ 0.8
LST1-220ENST00000464526 XRCC5P13010 732 aaKnown RBP20.04■□□□□ 0.8
LST1-220ENST00000464526 SREBF1P36956 1147 aa20.04■□□□□ 0.8
LST1-220ENST00000464526 AP3B2Q13367 1082 aa20.04■□□□□ 0.8
LST1-220ENST00000464526 DNERQ8NFT8 737 aa20.04■□□□□ 0.8
LST1-220ENST00000464526 NSUN6Q8TEA1 469 aaKnown RBP20.04■□□□□ 0.8
LST1-220ENST00000464526 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.04■□□□□ 0.8
LST1-220ENST00000464526 RTEL1Q9NZ71 1219 aa20.04■□□□□ 0.8
LST1-220ENST00000464526 TDP2O95551 362 aa20.03■□□□□ 0.8
LST1-220ENST00000464526 ARHGAP4P98171 946 aa20.03■□□□□ 0.8
LST1-220ENST00000464526 MAMDC4Q6UXC1 1216 aa20.03■□□□□ 0.8
LST1-220ENST00000464526 MAP3K20Q9NYL2 800 aaKnown RBP20.03■□□□□ 0.8
LST1-220ENST00000464526 DIS3Q9Y2L1 958 aaKnown RBP20.03■□□□□ 0.8
LST1-220ENST00000464526 KIAA1217Q5T5P2 1943 aa20.03■□□□□ 0.8
LST1-220ENST00000464526 DOCK5Q9H7D0 1870 aa20.02■□□□□ 0.8
LST1-220ENST00000464526 FAM86B1E9PN63 330 aa20.02■□□□□ 0.8
LST1-220ENST00000464526 GNRH1P01148 92 aa20.02■□□□□ 0.8
LST1-220ENST00000464526 FAM86B2P0C5J1 330 aa20.02■□□□□ 0.8
LST1-220ENST00000464526 HOXD10P28358 340 aa20.02■□□□□ 0.8
LST1-220ENST00000464526 RESTQ13127 1097 aa20.02■□□□□ 0.8
LST1-220ENST00000464526 GJC2Q5T442 439 aaPredicted RBP20.02■□□□□ 0.8
LST1-220ENST00000464526 GALNT17Q6IS24 598 aa20.02■□□□□ 0.8
LST1-220ENST00000464526 BICD2Q8TD16 824 aa20.02■□□□□ 0.8
LST1-220ENST00000464526 MORC4Q8TE76 937 aa20.02■□□□□ 0.8
LST1-220ENST00000464526 ADD3Q9UEY8 706 aaKnown RBP20.02■□□□□ 0.8
LST1-220ENST00000464526 KIF3AQ9Y496 699 aa20.02■□□□□ 0.8
LST1-220ENST00000464526 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.02■□□□□ 0.79
LST1-220ENST00000464526 INHAP05111 366 aa20.02■□□□□ 0.79
LST1-220ENST00000464526 ITGB5P18084 799 aa20.02■□□□□ 0.79
LST1-220ENST00000464526 U2AF2P26368 475 aaKnown RBP eCLIP20.02■□□□□ 0.79
LST1-220ENST00000464526 CACNB2Q08289 660 aaPredicted RBP20.02■□□□□ 0.79
LST1-220ENST00000464526 SEMA3FQ13275 785 aa20.02■□□□□ 0.79
LST1-220ENST00000464526 OLFML2BQ68BL8 750 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms