RNA–Protein interactions for RNA: ENST00000464423.1

UFM1-204, Transcript of ubiquitin fold modifier 1, humanhuman

TSL 3

Gene UFM1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-204ENST00000464423 NSUN6Q8TEA1 469 aaKnown RBP20.33■□□□□ 0.85
UFM1-204ENST00000464423 PHKBQ93100 1093 aa20.33■□□□□ 0.85
UFM1-204ENST00000464423 ZFP91Q96JP5 570 aaPredicted RBP20.33■□□□□ 0.85
UFM1-204ENST00000464423 VTA1Q9NP79 307 aa20.33■□□□□ 0.85
UFM1-204ENST00000464423 LOC102724159A0A0B4J2E5 919 aa20.32■□□□□ 0.84
UFM1-204ENST00000464423 DNM1LO00429 736 aa20.32■□□□□ 0.84
UFM1-204ENST00000464423 DTNBO60941 627 aa20.32■□□□□ 0.84
UFM1-204ENST00000464423 ADAMTS4O75173 837 aa20.32■□□□□ 0.84
UFM1-204ENST00000464423 DUSP11O75319 330 aaKnown RBP20.32■□□□□ 0.84
UFM1-204ENST00000464423 TNFAIP2Q03169 654 aa20.32■□□□□ 0.84
UFM1-204ENST00000464423 PWP2Q15269 919 aaKnown RBP20.32■□□□□ 0.84
UFM1-204ENST00000464423 NTRK3Q16288 839 aa20.32■□□□□ 0.84
UFM1-204ENST00000464423 IL31RAQ8NI17 732 aa20.32■□□□□ 0.84
UFM1-204ENST00000464423 CCDC196A0A1B0GTZ2 297 aa20.31■□□□□ 0.84
UFM1-204ENST00000464423 MEIS2O14770 477 aa20.31■□□□□ 0.84
UFM1-204ENST00000464423 AK2P54819 239 aa20.31■□□□□ 0.84
UFM1-204ENST00000464423 PPP2R5BQ15173 497 aa20.31■□□□□ 0.84
UFM1-204ENST00000464423 UBE2SQ16763 222 aa20.31■□□□□ 0.84
UFM1-204ENST00000464423 NOL8Q76FK4 1167 aaKnown RBP20.31■□□□□ 0.84
UFM1-204ENST00000464423 ZNF274Q96GC6 653 aaPredicted RBP20.31■□□□□ 0.84
UFM1-204ENST00000464423 PDCD2LQ9BRP1 358 aa20.31■□□□□ 0.84
UFM1-204ENST00000464423 SENP6Q9GZR1 1112 aaPredicted RBP20.31■□□□□ 0.84
UFM1-204ENST00000464423 MAP3K20Q9NYL2 800 aaKnown RBP20.31■□□□□ 0.84
UFM1-204ENST00000464423 TPCN1Q9ULQ1 816 aa20.31■□□□□ 0.84
UFM1-204ENST00000464423 GNEQ9Y223 722 aaKnown RBP20.31■□□□□ 0.84
UFM1-204ENST00000464423 STXBP3O00186 592 aa20.3■□□□□ 0.84
UFM1-204ENST00000464423 CTAGE5O15320 804 aa20.3■□□□□ 0.84
UFM1-204ENST00000464423 NR3C2P08235 984 aa20.3■□□□□ 0.84
UFM1-204ENST00000464423 MYCLP12524 364 aaPredicted RBP20.3■□□□□ 0.84
UFM1-204ENST00000464423 PKN1Q16512 942 aa20.3■□□□□ 0.84
UFM1-204ENST00000464423 IQSEC1Q6DN90 963 aa20.3■□□□□ 0.84
UFM1-204ENST00000464423 SAMD3Q8N6K7 520 aa20.3■□□□□ 0.84
UFM1-204ENST00000464423 DPF3Q92784 378 aa20.3■□□□□ 0.84
UFM1-204ENST00000464423 FERMT2Q96AC1 680 aa20.3■□□□□ 0.84
UFM1-204ENST00000464423 KIF2CQ99661 725 aa20.3■□□□□ 0.84
UFM1-204ENST00000464423 WDR11Q9BZH6 1224 aa20.3■□□□□ 0.84
UFM1-204ENST00000464423 PSTPIP2Q9H939 334 aa20.3■□□□□ 0.84
UFM1-204ENST00000464423 RBM47A0AV96 593 aaKnown RBP20.29■□□□□ 0.84
UFM1-204ENST00000464423 KBTBD13C9JR72 458 aa20.29■□□□□ 0.84
UFM1-204ENST00000464423 ARIH2O95376 493 aa20.29■□□□□ 0.84
UFM1-204ENST00000464423 NEK4P51957 841 aa20.29■□□□□ 0.84
UFM1-204ENST00000464423 NAPAP54920 295 aa20.29■□□□□ 0.84
UFM1-204ENST00000464423 BEX3Q00994 111 aa20.29■□□□□ 0.84
UFM1-204ENST00000464423 PGM5Q15124 567 aa20.29■□□□□ 0.84
UFM1-204ENST00000464423 SEPT14Q6ZU15 432 aa20.29■□□□□ 0.84
UFM1-204ENST00000464423 RNF180Q86T96 592 aa20.29■□□□□ 0.84
UFM1-204ENST00000464423 KLHDC9Q8NEP7 349 aa20.29■□□□□ 0.84
UFM1-204ENST00000464423 SMARCC2Q8TAQ2 1214 aa20.29■□□□□ 0.84
UFM1-204ENST00000464423 COPS5Q92905 334 aa20.29■□□□□ 0.84
UFM1-204ENST00000464423 IWS1Q96ST2 819 aa20.29■□□□□ 0.84
UFM1-204ENST00000464423 MPHOSPH6Q99547 160 aaKnown RBP20.29■□□□□ 0.84
UFM1-204ENST00000464423 SLC26A6Q9BXS9 759 aa20.29■□□□□ 0.84
UFM1-204ENST00000464423 UPF3AQ9H1J1 476 aaKnown RBP20.29■□□□□ 0.84
UFM1-204ENST00000464423 ALDH8A1Q9H2A2 487 aaPredicted RBP20.29■□□□□ 0.84
UFM1-204ENST00000464423 B4DLN1 442 aa20.28■□□□□ 0.84
UFM1-204ENST00000464423 ADAMTS3O15072 1205 aa20.28■□□□□ 0.84
UFM1-204ENST00000464423 DYNC1LI2O43237 492 aaPredicted RBP20.28■□□□□ 0.84
UFM1-204ENST00000464423 C6orf222P0C671 652 aaPredicted RBP20.28■□□□□ 0.84
UFM1-204ENST00000464423 IFNAR1P17181 557 aa20.28■□□□□ 0.84
UFM1-204ENST00000464423 MRPL12P52815 198 aaKnown RBP20.28■□□□□ 0.84
UFM1-204ENST00000464423 ATN1P54259 1190 aaPredicted RBP20.28■□□□□ 0.84
UFM1-204ENST00000464423 GJA9P57773 515 aa20.28■□□□□ 0.84
UFM1-204ENST00000464423 STXBP2Q15833 593 aa20.28■□□□□ 0.84
UFM1-204ENST00000464423 KCNA10Q16322 511 aa20.28■□□□□ 0.84
UFM1-204ENST00000464423 PFKFB3Q16875 520 aaPredicted RBP20.28■□□□□ 0.84
UFM1-204ENST00000464423 LRRC26Q2I0M4 334 aa20.28■□□□□ 0.84
UFM1-204ENST00000464423 CCSAPQ6IQ19 270 aaPredicted RBP20.28■□□□□ 0.84
UFM1-204ENST00000464423 TLK2Q86UE8 772 aa20.28■□□□□ 0.84
UFM1-204ENST00000464423 HTATIP2Q9BUP3 242 aa20.28■□□□□ 0.84
UFM1-204ENST00000464423 C22orf23Q9BZE7 217 aa20.28■□□□□ 0.84
UFM1-204ENST00000464423 BARHL2Q9NY43 387 aa20.28■□□□□ 0.84
UFM1-204ENST00000464423 PCDH10Q9P2E7 1040 aa20.28■□□□□ 0.84
UFM1-204ENST00000464423 PIK3CDO00329 1044 aa20.27■□□□□ 0.84
UFM1-204ENST00000464423 PRPF3O43395 683 aaKnown RBP20.27■□□□□ 0.84
UFM1-204ENST00000464423 LARGE1O95461 756 aa20.27■□□□□ 0.84
UFM1-204ENST00000464423 SCG2P13521 617 aa20.27■□□□□ 0.84
UFM1-204ENST00000464423 SCRN1Q12765 414 aa20.27■□□□□ 0.84
UFM1-204ENST00000464423 DUSP28Q4G0W2 176 aa20.27■□□□□ 0.84
UFM1-204ENST00000464423 VSIG10LQ86VR7 867 aa20.27■□□□□ 0.84
UFM1-204ENST00000464423 CUL5Q93034 780 aa20.27■□□□□ 0.84
UFM1-204ENST00000464423 PHF24Q9UPV7 400 aa20.27■□□□□ 0.84
UFM1-204ENST00000464423 EIF3JO75822 258 aaKnown RBP20.26■□□□□ 0.83
UFM1-204ENST00000464423 RGS20O76081 388 aa20.26■□□□□ 0.83
UFM1-204ENST00000464423 ACLYP53396 1101 aa20.26■□□□□ 0.83
UFM1-204ENST00000464423 LY6KQ17RY6 165 aa20.26■□□□□ 0.83
UFM1-204ENST00000464423 SCFD2Q8WU76 684 aa20.26■□□□□ 0.83
UFM1-204ENST00000464423 FRMPD4Q14CM0 1322 aa20.26■□□□□ 0.83
UFM1-204ENST00000464423 SMCO2A6NFE2 343 aa20.25■□□□□ 0.83
UFM1-204ENST00000464423 PFKFB2O60825 505 aa20.25■□□□□ 0.83
UFM1-204ENST00000464423 TXNP10599 105 aaKnown RBP20.25■□□□□ 0.83
UFM1-204ENST00000464423 MRPS9P82933 396 aaKnown RBP20.25■□□□□ 0.83
UFM1-204ENST00000464423 ME3Q16798 604 aa20.25■□□□□ 0.83
UFM1-204ENST00000464423 GNASQ5JWF2 1037 aa20.25■□□□□ 0.83
UFM1-204ENST00000464423 CCDC62Q6P9F0 684 aa20.25■□□□□ 0.83
UFM1-204ENST00000464423 NECAB1Q8N987 351 aa20.25■□□□□ 0.83
UFM1-204ENST00000464423 PGBD1Q96JS3 809 aa20.25■□□□□ 0.83
UFM1-204ENST00000464423 RNF26Q9BY78 433 aaPredicted RBP20.25■□□□□ 0.83
UFM1-204ENST00000464423 AP5M1Q9H0R1 490 aa20.25■□□□□ 0.83
UFM1-204ENST00000464423 SLKQ9H2G2 1235 aaPredicted RBP20.25■□□□□ 0.83
UFM1-204ENST00000464423 SPC25Q9HBM1 224 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms