RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 TXNP10599 105 aaKnown RBP16.74■□□□□ 0.27
SNRNP40-203ENST00000463988 ZNF365Q70YC5 407 aa16.74■□□□□ 0.27
SNRNP40-203ENST00000463988 CYB5R4Q7L1T6 521 aa16.74■□□□□ 0.27
SNRNP40-203ENST00000463988 TBC1D5Q92609 795 aa16.74■□□□□ 0.27
SNRNP40-203ENST00000463988 MTMR8Q96EF0 704 aa16.74■□□□□ 0.27
SNRNP40-203ENST00000463988 AMNQ9BXJ7 453 aa16.74■□□□□ 0.27
SNRNP40-203ENST00000463988 PALM3A6NDB9 673 aaPredicted RBP16.73■□□□□ 0.27
SNRNP40-203ENST00000463988 KLRF2D3W0D1 207 aa16.73■□□□□ 0.27
SNRNP40-203ENST00000463988 MYL3P08590 195 aa16.73■□□□□ 0.27
SNRNP40-203ENST00000463988 CYP21A2P08686 494 aa16.73■□□□□ 0.27
SNRNP40-203ENST00000463988 GHRHRQ02643 423 aa16.73■□□□□ 0.27
SNRNP40-203ENST00000463988 PTH1RQ03431 593 aa16.73■□□□□ 0.27
SNRNP40-203ENST00000463988 CCDC62Q6P9F0 684 aa16.73■□□□□ 0.27
SNRNP40-203ENST00000463988 STAG2Q8N3U4 1231 aa16.73■□□□□ 0.27
SNRNP40-203ENST00000463988 SAMD3Q8N6K7 520 aa16.73■□□□□ 0.27
SNRNP40-203ENST00000463988 HERVK_113Q902F9 699 aa16.73■□□□□ 0.27
SNRNP40-203ENST00000463988 TAAR1Q96RJ0 339 aa16.73■□□□□ 0.27
SNRNP40-203ENST00000463988 RMDN3Q96TC7 470 aa16.73■□□□□ 0.27
SNRNP40-203ENST00000463988 MTIF3Q9H2K0 278 aaKnown RBP16.73■□□□□ 0.27
SNRNP40-203ENST00000463988 VAT1LQ9HCJ6 419 aa16.73■□□□□ 0.27
SNRNP40-203ENST00000463988 MAP3K20Q9NYL2 800 aaKnown RBP16.73■□□□□ 0.27
SNRNP40-203ENST00000463988 MAD2L2Q9UI95 211 aa16.73■□□□□ 0.27
SNRNP40-203ENST00000463988 SCN10AQ9Y5Y9 1956 aa16.72■□□□□ 0.27
SNRNP40-203ENST00000463988 ZBTB5O15062 677 aa16.72■□□□□ 0.27
SNRNP40-203ENST00000463988 SGSM2O43147 1006 aa16.72■□□□□ 0.27
SNRNP40-203ENST00000463988 ACRP10323 421 aa16.72■□□□□ 0.27
SNRNP40-203ENST00000463988 DNAJB2P25686 324 aa16.72■□□□□ 0.27
SNRNP40-203ENST00000463988 HSD17B4P51659 736 aa16.72■□□□□ 0.27
SNRNP40-203ENST00000463988 PTPN11Q06124 597 aaPredicted RBP16.72■□□□□ 0.27
SNRNP40-203ENST00000463988 TRAF1Q13077 416 aa16.72■□□□□ 0.27
SNRNP40-203ENST00000463988 STXBP2Q15833 593 aa16.72■□□□□ 0.27
SNRNP40-203ENST00000463988 NFRKBQ6P4R8 1299 aa16.72■□□□□ 0.27
SNRNP40-203ENST00000463988 RPUSD2Q8IZ73 545 aaKnown RBP16.72■□□□□ 0.27
SNRNP40-203ENST00000463988 COL20A1Q9P218 1284 aa16.72■□□□□ 0.27
SNRNP40-203ENST00000463988 ERICH2A1L162 156 aa16.71■□□□□ 0.27
SNRNP40-203ENST00000463988 DLL1O00548 723 aa16.71■□□□□ 0.27
SNRNP40-203ENST00000463988 EIF3JO75822 258 aaKnown RBP16.71■□□□□ 0.27
SNRNP40-203ENST00000463988 ARIH2O95376 493 aa16.71■□□□□ 0.27
SNRNP40-203ENST00000463988 FGBP02675 491 aa16.71■□□□□ 0.27
SNRNP40-203ENST00000463988 GRM4Q14833 912 aa16.71■□□□□ 0.27
SNRNP40-203ENST00000463988 SART3Q15020 963 aaKnown RBP16.71■□□□□ 0.27
SNRNP40-203ENST00000463988 NBPF20Q3BBV1 942 aa16.71■□□□□ 0.27
SNRNP40-203ENST00000463988 RALYLQ86SE5 291 aaKnown RBP16.71■□□□□ 0.27
SNRNP40-203ENST00000463988 NCOA7Q8NI08 942 aa16.71■□□□□ 0.27
SNRNP40-203ENST00000463988 COPS5Q92905 334 aa16.71■□□□□ 0.27
SNRNP40-203ENST00000463988 MAP4K1Q92918 833 aa16.71■□□□□ 0.27
SNRNP40-203ENST00000463988 TIFAQ96CG3 184 aa16.71■□□□□ 0.27
SNRNP40-203ENST00000463988 UMODL1Q5DID0 1318 aa16.7■□□□□ 0.26
SNRNP40-203ENST00000463988 MYH6P13533 1939 aa16.7■□□□□ 0.26
SNRNP40-203ENST00000463988 E7EWF7 191 aa16.7■□□□□ 0.26
SNRNP40-203ENST00000463988 OPLAHO14841 1288 aa16.7■□□□□ 0.26
SNRNP40-203ENST00000463988 IFIT3O14879 490 aaKnown RBP16.7■□□□□ 0.26
SNRNP40-203ENST00000463988 CFBP00751 764 aa16.7■□□□□ 0.26
SNRNP40-203ENST00000463988 GH1P01241 217 aa16.7■□□□□ 0.26
SNRNP40-203ENST00000463988 IRX6P78412 446 aaPredicted RBP16.7■□□□□ 0.26
SNRNP40-203ENST00000463988 ARHGEF16Q5VV41 709 aa16.7■□□□□ 0.26
SNRNP40-203ENST00000463988 WNT8AQ9H1J5 351 aa16.7■□□□□ 0.26
SNRNP40-203ENST00000463988 RIOX1Q9H6W3 641 aa16.7■□□□□ 0.26
SNRNP40-203ENST00000463988 PXMP2Q9NR77 195 aa16.7■□□□□ 0.26
SNRNP40-203ENST00000463988 TRMT13Q9NUP7 481 aaKnown RBP16.7■□□□□ 0.26
SNRNP40-203ENST00000463988 PCDHA1Q9Y5I3 950 aa16.7■□□□□ 0.26
SNRNP40-203ENST00000463988 PPP1R11O60927 126 aaPredicted RBP16.69■□□□□ 0.26
SNRNP40-203ENST00000463988 NR3C2P08235 984 aa16.69■□□□□ 0.26
SNRNP40-203ENST00000463988 PFKMP08237 780 aa16.69■□□□□ 0.26
SNRNP40-203ENST00000463988 CCL23P55773 120 aa16.69■□□□□ 0.26
SNRNP40-203ENST00000463988 TROAPQ12815 778 aa16.69■□□□□ 0.26
SNRNP40-203ENST00000463988 WTAPQ15007 396 aa16.69■□□□□ 0.26
SNRNP40-203ENST00000463988 SEPT14Q6ZU15 432 aa16.69■□□□□ 0.26
SNRNP40-203ENST00000463988 STOX1Q6ZVD7 989 aa16.69■□□□□ 0.26
SNRNP40-203ENST00000463988 MAFAQ8NHW3 353 aaPredicted RBP16.69■□□□□ 0.26
SNRNP40-203ENST00000463988 MYLIPQ8WY64 445 aa16.69■□□□□ 0.26
SNRNP40-203ENST00000463988 EMID1Q96A84 441 aaPredicted RBP16.69■□□□□ 0.26
SNRNP40-203ENST00000463988 PBX4Q9BYU1 374 aa16.69■□□□□ 0.26
SNRNP40-203ENST00000463988 ZNF576Q9H609 170 aa16.69■□□□□ 0.26
SNRNP40-203ENST00000463988 FOSL2P15408 326 aa16.68■□□□□ 0.26
SNRNP40-203ENST00000463988 EIF2AK2P19525 551 aaKnown RBP16.68■□□□□ 0.26
SNRNP40-203ENST00000463988 ARHGAP1Q07960 439 aa16.68■□□□□ 0.26
SNRNP40-203ENST00000463988 RAB30Q15771 203 aa16.68■□□□□ 0.26
SNRNP40-203ENST00000463988 LY6KQ17RY6 165 aa16.68■□□□□ 0.26
SNRNP40-203ENST00000463988 FAM47CQ5HY64 1035 aa16.68■□□□□ 0.26
SNRNP40-203ENST00000463988 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.68■□□□□ 0.26
SNRNP40-203ENST00000463988 AFG1LQ8WV93 481 aa16.68■□□□□ 0.26
SNRNP40-203ENST00000463988 MTA3Q9BTC8 594 aa16.68■□□□□ 0.26
SNRNP40-203ENST00000463988 CXXC1Q9P0U4 656 aaPredicted RBP16.68■□□□□ 0.26
SNRNP40-203ENST00000463988 DDX41Q9UJV9 622 aaKnown RBP16.68■□□□□ 0.26
SNRNP40-203ENST00000463988 TAF6LQ9Y6J9 622 aa16.68■□□□□ 0.26
SNRNP40-203ENST00000463988 CDH23Q9H251 3354 aa16.68■□□□□ 0.26
SNRNP40-203ENST00000463988 KIAA1217Q5T5P2 1943 aa16.67■□□□□ 0.26
SNRNP40-203ENST00000463988 PNMA6FA0A0J9YX94 578 aa16.67■□□□□ 0.26
SNRNP40-203ENST00000463988 PITPNM1O00562 1244 aa16.67■□□□□ 0.26
SNRNP40-203ENST00000463988 MMP3P08254 477 aa16.67■□□□□ 0.26
SNRNP40-203ENST00000463988 CYP2C9P11712 490 aa16.67■□□□□ 0.26
SNRNP40-203ENST00000463988 CASTP20810 708 aaKnown RBP16.67■□□□□ 0.26
SNRNP40-203ENST00000463988 RFC2P35250 354 aa16.67■□□□□ 0.26
SNRNP40-203ENST00000463988 GRIN2CQ14957 1233 aa16.67■□□□□ 0.26
SNRNP40-203ENST00000463988 SLC35G1Q2M3R5 365 aa16.67■□□□□ 0.26
SNRNP40-203ENST00000463988 KCNV1Q6PIU1 500 aa16.67■□□□□ 0.26
SNRNP40-203ENST00000463988 CATIPQ7Z7H3 387 aa16.67■□□□□ 0.26
SNRNP40-203ENST00000463988 VSIG10LQ86VR7 867 aa16.67■□□□□ 0.26
SNRNP40-203ENST00000463988 SESTD1Q86VW0 696 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms