RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 UBE2SQ16763 222 aa21.78■■□□□ 1.08
LMNB1-204ENST00000463908 NSUN6Q8TEA1 469 aaKnown RBP21.78■■□□□ 1.08
LMNB1-204ENST00000463908 RNF208Q9H0X6 261 aa21.78■■□□□ 1.08
LMNB1-204ENST00000463908 HMX1Q9NP08 348 aaPredicted RBP21.78■■□□□ 1.08
LMNB1-204ENST00000463908 VPS54Q9P1Q0 977 aa21.78■■□□□ 1.08
LMNB1-204ENST00000463908 ORC3Q9UBD5 711 aaPredicted RBP21.78■■□□□ 1.08
LMNB1-204ENST00000463908 STK36Q9NRP7 1315 aa21.78■■□□□ 1.08
LMNB1-204ENST00000463908 CENPFP49454 3210 aa21.78■■□□□ 1.08
LMNB1-204ENST00000463908 MKI67P46013 3256 aaKnown RBP21.77■■□□□ 1.08
LMNB1-204ENST00000463908 LOC102724159A0A0B4J2E5 919 aa21.77■■□□□ 1.08
LMNB1-204ENST00000463908 MCM2P49736 904 aa21.77■■□□□ 1.08
LMNB1-204ENST00000463908 PWP2Q15269 919 aaKnown RBP21.77■■□□□ 1.08
LMNB1-204ENST00000463908 PRPF38BQ5VTL8 546 aaKnown RBP21.77■■□□□ 1.08
LMNB1-204ENST00000463908 SMARCC2Q8TAQ2 1214 aa21.77■■□□□ 1.08
LMNB1-204ENST00000463908 ZMYND12Q9H0C1 365 aa21.77■■□□□ 1.08
LMNB1-204ENST00000463908 PAK6Q9NQU5 681 aaPredicted RBP21.77■■□□□ 1.08
LMNB1-204ENST00000463908 SH3GLB2Q9NR46 395 aa21.77■■□□□ 1.08
LMNB1-204ENST00000463908 PXMP2Q9NR77 195 aa21.77■■□□□ 1.08
LMNB1-204ENST00000463908 ESYT2A0FGR8 921 aa21.76■■□□□ 1.07
LMNB1-204ENST00000463908 MRPL12P52815 198 aaKnown RBP21.76■■□□□ 1.07
LMNB1-204ENST00000463908 ACVR2BQ13705 512 aa21.76■■□□□ 1.07
LMNB1-204ENST00000463908 ARHGEF16Q5VV41 709 aa21.76■■□□□ 1.07
LMNB1-204ENST00000463908 CUL5Q93034 780 aa21.76■■□□□ 1.07
LMNB1-204ENST00000463908 LLPHQ9BRT6 129 aaKnown RBP21.76■■□□□ 1.07
LMNB1-204ENST00000463908 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.76■■□□□ 1.07
LMNB1-204ENST00000463908 ABHD16BQ9H3Z7 469 aa21.76■■□□□ 1.07
LMNB1-204ENST00000463908 GJB4Q9NTQ9 266 aa21.76■■□□□ 1.07
LMNB1-204ENST00000463908 NRBP1Q9UHY1 535 aa21.76■■□□□ 1.07
LMNB1-204ENST00000463908 EIF2AK2P19525 551 aaKnown RBP21.75■■□□□ 1.07
LMNB1-204ENST00000463908 CLK2P49760 499 aaKnown RBP21.75■■□□□ 1.07
LMNB1-204ENST00000463908 ADCY7P51828 1080 aa21.75■■□□□ 1.07
LMNB1-204ENST00000463908 LHX8Q68G74 356 aa21.75■■□□□ 1.07
LMNB1-204ENST00000463908 TAPT1Q6NXT6 567 aa21.75■■□□□ 1.07
LMNB1-204ENST00000463908 EEPD1Q7L9B9 569 aa21.75■■□□□ 1.07
LMNB1-204ENST00000463908 IWS1Q96ST2 819 aa21.75■■□□□ 1.07
LMNB1-204ENST00000463908 PDCD2LQ9BRP1 358 aa21.75■■□□□ 1.07
LMNB1-204ENST00000463908 TMEM260Q9NX78 707 aa21.75■■□□□ 1.07
LMNB1-204ENST00000463908 CNPY2Q9Y2B0 182 aa21.75■■□□□ 1.07
LMNB1-204ENST00000463908 RBBP6Q7Z6E9 1792 aaKnown RBP21.74■■□□□ 1.07
LMNB1-204ENST00000463908 POTEFA5A3E0 1075 aa21.74■■□□□ 1.07
LMNB1-204ENST00000463908 GJB1P08034 283 aa21.74■■□□□ 1.07
LMNB1-204ENST00000463908 NR3C2P08235 984 aa21.74■■□□□ 1.07
LMNB1-204ENST00000463908 CNGA1P29973 690 aa21.74■■□□□ 1.07
LMNB1-204ENST00000463908 VSIG10LQ86VR7 867 aa21.74■■□□□ 1.07
LMNB1-204ENST00000463908 IL31RAQ8NI17 732 aa21.74■■□□□ 1.07
LMNB1-204ENST00000463908 DEFB118Q96PH6 123 aa21.74■■□□□ 1.07
LMNB1-204ENST00000463908 PDGFCQ9NRA1 345 aa21.74■■□□□ 1.07
LMNB1-204ENST00000463908 PCDHA6Q9UN73 950 aa21.74■■□□□ 1.07
LMNB1-204ENST00000463908 PCDHA8Q9Y5H6 950 aa21.74■■□□□ 1.07
LMNB1-204ENST00000463908 SEPT4O43236 478 aa21.73■■□□□ 1.07
LMNB1-204ENST00000463908 PDE4DQ08499 809 aa21.73■■□□□ 1.07
LMNB1-204ENST00000463908 PGM5Q15124 567 aa21.73■■□□□ 1.07
LMNB1-204ENST00000463908 NPY5RQ15761 445 aa21.73■■□□□ 1.07
LMNB1-204ENST00000463908 TEX2Q8IWB9 1127 aa21.73■■□□□ 1.07
LMNB1-204ENST00000463908 CCDC12Q8WUD4 166 aaPredicted RBP21.73■■□□□ 1.07
LMNB1-204ENST00000463908 ALG1Q9BT22 464 aa21.73■■□□□ 1.07
LMNB1-204ENST00000463908 C6orf50Q9HD87 102 aa21.73■■□□□ 1.07
LMNB1-204ENST00000463908 ZHX1Q9UKY1 873 aaPredicted RBP21.73■■□□□ 1.07
LMNB1-204ENST00000463908 FRMPD4Q14CM0 1322 aa21.73■■□□□ 1.07
LMNB1-204ENST00000463908 ADCY6O43306 1168 aa21.72■■□□□ 1.07
LMNB1-204ENST00000463908 SGPL1O95470 568 aa21.72■■□□□ 1.07
LMNB1-204ENST00000463908 CCDC144BQ3MJ40 725 aa21.72■■□□□ 1.07
LMNB1-204ENST00000463908 TMEM63BQ5T3F8 832 aa21.72■■□□□ 1.07
LMNB1-204ENST00000463908 FBXO16Q8IX29 292 aaPredicted RBP21.72■■□□□ 1.07
LMNB1-204ENST00000463908 ZFP91Q96JP5 570 aaPredicted RBP21.72■■□□□ 1.07
LMNB1-204ENST00000463908 PGBD1Q96JS3 809 aa21.72■■□□□ 1.07
LMNB1-204ENST00000463908 TMEM106CQ9BVX2 250 aa21.72■■□□□ 1.07
LMNB1-204ENST00000463908 GLT8D2Q9H1C3 349 aa21.72■■□□□ 1.07
LMNB1-204ENST00000463908 DDX20Q9UHI6 824 aaKnown RBP21.72■■□□□ 1.07
LMNB1-204ENST00000463908 KCNJ14Q9UNX9 436 aa21.72■■□□□ 1.07
LMNB1-204ENST00000463908 BRCA2P51587 3418 aa21.72■■□□□ 1.07
LMNB1-204ENST00000463908 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.71■■□□□ 1.07
LMNB1-204ENST00000463908 B4DLN1 442 aa21.71■■□□□ 1.07
LMNB1-204ENST00000463908 MYCLP12524 364 aaPredicted RBP21.71■■□□□ 1.07
LMNB1-204ENST00000463908 GNA11P29992 359 aa21.71■■□□□ 1.07
LMNB1-204ENST00000463908 NLRP5P59047 1200 aa21.71■■□□□ 1.07
LMNB1-204ENST00000463908 MRPS9P82933 396 aaKnown RBP21.71■■□□□ 1.07
LMNB1-204ENST00000463908 STXBP2Q15833 593 aa21.71■■□□□ 1.07
LMNB1-204ENST00000463908 JAKMIP3Q5VZ66 844 aa21.71■■□□□ 1.07
LMNB1-204ENST00000463908 ANO1Q5XXA6 986 aa21.71■■□□□ 1.07
LMNB1-204ENST00000463908 CCDC148Q8NFR7 591 aa21.71■■□□□ 1.07
LMNB1-204ENST00000463908 U2AF1L4Q8WU68 220 aaKnown RBP21.71■■□□□ 1.07
LMNB1-204ENST00000463908 PHF20Q9BVI0 1012 aa21.71■■□□□ 1.07
LMNB1-204ENST00000463908 CRISPLD2Q9H0B8 497 aa21.71■■□□□ 1.07
LMNB1-204ENST00000463908 VTA1Q9NP79 307 aa21.71■■□□□ 1.07
LMNB1-204ENST00000463908 RBM47A0AV96 593 aaKnown RBP21.7■■□□□ 1.06
LMNB1-204ENST00000463908 M0R2N6 131 aa21.7■■□□□ 1.06
LMNB1-204ENST00000463908 EIF3JO75822 258 aaKnown RBP21.7■■□□□ 1.06
LMNB1-204ENST00000463908 RGS20O76081 388 aa21.7■■□□□ 1.06
LMNB1-204ENST00000463908 EN2P19622 333 aaPredicted RBP21.7■■□□□ 1.06
LMNB1-204ENST00000463908 ADCYAP1R1P41586 468 aa21.7■■□□□ 1.06
LMNB1-204ENST00000463908 GJA8P48165 433 aa21.7■■□□□ 1.06
LMNB1-204ENST00000463908 FAM177A1Q8N128 213 aaPredicted RBP21.7■■□□□ 1.06
LMNB1-204ENST00000463908 RASGRP4Q8TDF6 673 aa21.7■■□□□ 1.06
LMNB1-204ENST00000463908 WASF1Q92558 559 aa21.7■■□□□ 1.06
LMNB1-204ENST00000463908 SNX21Q969T3 373 aa21.7■■□□□ 1.06
LMNB1-204ENST00000463908 MPHOSPH6Q99547 160 aaKnown RBP21.7■■□□□ 1.06
LMNB1-204ENST00000463908 FAM184BQ9ULE4 1060 aa21.7■■□□□ 1.06
LMNB1-204ENST00000463908 PCDHA4Q9UN74 947 aa21.7■■□□□ 1.06
LMNB1-204ENST00000463908 MCM3APO60318 1980 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms