RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 ATP2A1O14983 1001 aa21.5■■□□□ 1.03
CCDC78-206ENST00000463539 TMEM132BQ14DG7 1078 aa21.5■■□□□ 1.03
CCDC78-206ENST00000463539 DHX58Q96C10 678 aa21.5■■□□□ 1.03
CCDC78-206ENST00000463539 TEX13BQ9BXU2 312 aa21.5■■□□□ 1.03
CCDC78-206ENST00000463539 RBSNQ9H1K0 784 aa21.5■■□□□ 1.03
CCDC78-206ENST00000463539 GBA2Q9HCG7 927 aaPredicted RBP21.5■■□□□ 1.03
CCDC78-206ENST00000463539 RNF146Q9NTX7 359 aa21.5■■□□□ 1.03
CCDC78-206ENST00000463539 A0A087X0B3 334 aa21.49■■□□□ 1.03
CCDC78-206ENST00000463539 ACTN4O43707 911 aaKnown RBP21.49■■□□□ 1.03
CCDC78-206ENST00000463539 MARCH6O60337 910 aa21.49■■□□□ 1.03
CCDC78-206ENST00000463539 CYP3A4P08684 503 aa21.49■■□□□ 1.03
CCDC78-206ENST00000463539 HOXA7P31268 230 aaPredicted RBP21.49■■□□□ 1.03
CCDC78-206ENST00000463539 UBA7P41226 1012 aa21.49■■□□□ 1.03
CCDC78-206ENST00000463539 TECP42680 631 aa21.49■■□□□ 1.03
CCDC78-206ENST00000463539 FXR2P51116 673 aaKnown RBP eCLIP21.49■■□□□ 1.03
CCDC78-206ENST00000463539 ELOA2Q8IYF1 753 aaPredicted RBP21.49■■□□□ 1.03
CCDC78-206ENST00000463539 SAMD3Q8N6K7 520 aa21.49■■□□□ 1.03
CCDC78-206ENST00000463539 CCDC34Q96HJ3 373 aa21.49■■□□□ 1.03
CCDC78-206ENST00000463539 MAP3K20Q9NYL2 800 aaKnown RBP21.49■■□□□ 1.03
CCDC78-206ENST00000463539 SERTAD1Q9UHV2 236 aa21.49■■□□□ 1.03
CCDC78-206ENST00000463539 AGTPBP1Q9UPW5 1226 aa21.49■■□□□ 1.03
CCDC78-206ENST00000463539 CELF2O95319 508 aaKnown RBP21.48■■□□□ 1.03
CCDC78-206ENST00000463539 CDC25AP30304 524 aa21.48■■□□□ 1.03
CCDC78-206ENST00000463539 CIITAP33076 1130 aa21.48■■□□□ 1.03
CCDC78-206ENST00000463539 IRX3P78415 501 aaPredicted RBP21.48■■□□□ 1.03
CCDC78-206ENST00000463539 PRR16Q569H4 304 aa21.48■■□□□ 1.03
CCDC78-206ENST00000463539 KANK3Q6NY19 840 aa21.48■■□□□ 1.03
CCDC78-206ENST00000463539 FASTKD5Q7L8L6 764 aaKnown RBP21.48■■□□□ 1.03
CCDC78-206ENST00000463539 ERCC4Q92889 916 aaPredicted RBP21.48■■□□□ 1.03
CCDC78-206ENST00000463539 RAB34Q9BZG1 259 aa21.48■■□□□ 1.03
CCDC78-206ENST00000463539 KIAA1468Q9P260 1216 aa21.48■■□□□ 1.03
CCDC78-206ENST00000463539 USP25Q9UHP3 1055 aa21.48■■□□□ 1.03
CCDC78-206ENST00000463539 PARP14Q460N5 1801 aa21.48■■□□□ 1.03
CCDC78-206ENST00000463539 PP2D1A8MPX8 630 aa21.48■■□□□ 1.03
CCDC78-206ENST00000463539 ZNF76P36508 570 aa21.48■■□□□ 1.03
CCDC78-206ENST00000463539 SNAPC2Q13487 334 aa21.48■■□□□ 1.03
CCDC78-206ENST00000463539 Q4G0T1 1027 aa21.48■■□□□ 1.03
CCDC78-206ENST00000463539 CEP57L1Q8IYX8 460 aa21.48■■□□□ 1.03
CCDC78-206ENST00000463539 IGSF22Q8N9C0 903 aa21.48■■□□□ 1.03
CCDC78-206ENST00000463539 IQUBQ8NA54 791 aa21.48■■□□□ 1.03
CCDC78-206ENST00000463539 RASSF8Q8NHQ8 419 aa21.48■■□□□ 1.03
CCDC78-206ENST00000463539 HAS1Q92839 578 aa21.48■■□□□ 1.03
CCDC78-206ENST00000463539 RIPK3Q9Y572 518 aa21.48■■□□□ 1.03
CCDC78-206ENST00000463539 LOC285556D6RIA3 1793 aa21.47■■□□□ 1.03
CCDC78-206ENST00000463539 RLFQ13129 1914 aa21.47■■□□□ 1.03
CCDC78-206ENST00000463539 FAM86B1E9PN63 330 aa21.47■■□□□ 1.03
CCDC78-206ENST00000463539 FAM86B2P0C5J1 330 aa21.47■■□□□ 1.03
CCDC78-206ENST00000463539 SLFN14P0C7P3 912 aa21.47■■□□□ 1.03
CCDC78-206ENST00000463539 GJA5P36382 358 aa21.47■■□□□ 1.03
CCDC78-206ENST00000463539 PLS1Q14651 629 aa21.47■■□□□ 1.03
CCDC78-206ENST00000463539 MB21D1Q8N884 522 aa21.47■■□□□ 1.03
CCDC78-206ENST00000463539 C2orf69Q8N8R5 385 aa21.47■■□□□ 1.03
CCDC78-206ENST00000463539 RNF214Q8ND24 703 aa21.47■■□□□ 1.03
CCDC78-206ENST00000463539 CCSER1Q9C0I3 900 aa21.47■■□□□ 1.03
CCDC78-206ENST00000463539 TTC12Q9H892 705 aaPredicted RBP21.47■■□□□ 1.03
CCDC78-206ENST00000463539 KCNMB3Q9NPA1 279 aa21.47■■□□□ 1.03
CCDC78-206ENST00000463539 STAT3P40763 770 aa21.46■■□□□ 1.03
CCDC78-206ENST00000463539 ZRSR1Q15695 479 aaKnown RBP21.46■■□□□ 1.03
CCDC78-206ENST00000463539 TKFCQ3LXA3 575 aa21.46■■□□□ 1.03
CCDC78-206ENST00000463539 RNF207Q6ZRF8 634 aa21.46■■□□□ 1.03
CCDC78-206ENST00000463539 SYTL5Q8TDW5 730 aaPredicted RBP21.46■■□□□ 1.03
CCDC78-206ENST00000463539 COL20A1Q9P218 1284 aa21.46■■□□□ 1.03
CCDC78-206ENST00000463539 LRWD1Q9UFC0 647 aa21.46■■□□□ 1.03
CCDC78-206ENST00000463539 RABGAP1Q9Y3P9 1069 aa21.46■■□□□ 1.03
CCDC78-206ENST00000463539 PTPRFP10586 1907 aa21.46■■□□□ 1.03
CCDC78-206ENST00000463539 RPS6P62753 249 aaKnown RBP21.45■■□□□ 1.03
CCDC78-206ENST00000463539 UBXN2AP68543 259 aa21.45■■□□□ 1.03
CCDC78-206ENST00000463539 PABPC4Q13310 644 aaKnown RBP eCLIP21.45■■□□□ 1.03
CCDC78-206ENST00000463539 PNOCQ13519 176 aa21.45■■□□□ 1.03
CCDC78-206ENST00000463539 MOGSQ13724 837 aa21.45■■□□□ 1.03
CCDC78-206ENST00000463539 PDIA5Q14554 519 aa21.45■■□□□ 1.03
CCDC78-206ENST00000463539 KARSQ15046 597 aaKnown RBP21.45■■□□□ 1.03
CCDC78-206ENST00000463539 POSTNQ15063 836 aa21.45■■□□□ 1.03
CCDC78-206ENST00000463539 E2F4Q16254 413 aa21.45■■□□□ 1.03
CCDC78-206ENST00000463539 STX1AQ16623 288 aa21.45■■□□□ 1.03
CCDC78-206ENST00000463539 NSMFQ6X4W1 530 aa21.45■■□□□ 1.03
CCDC78-206ENST00000463539 LBX2Q6XYB7 198 aa21.45■■□□□ 1.03
CCDC78-206ENST00000463539 SLFN12Q8IYM2 578 aa21.45■■□□□ 1.03
CCDC78-206ENST00000463539 LENG9Q96B70 501 aa21.45■■□□□ 1.03
CCDC78-206ENST00000463539 DISC1Q9NRI5 854 aa21.45■■□□□ 1.03
CCDC78-206ENST00000463539 CCDC39Q9UFE4 941 aa21.45■■□□□ 1.03
CCDC78-206ENST00000463539 SMCHD1A6NHR9 2005 aa21.45■■□□□ 1.02
CCDC78-206ENST00000463539 MYH7BA7E2Y1 1941 aa21.45■■□□□ 1.02
CCDC78-206ENST00000463539 TBX3O15119 743 aa21.45■■□□□ 1.02
CCDC78-206ENST00000463539 SLC30A10Q6XR72 485 aa21.45■■□□□ 1.02
CCDC78-206ENST00000463539 CABP7Q86V35 215 aa21.45■■□□□ 1.02
CCDC78-206ENST00000463539 ETNPPLQ8TBG4 499 aa21.45■■□□□ 1.02
CCDC78-206ENST00000463539 ASCC2Q9H1I8 757 aaPredicted RBP21.45■■□□□ 1.02
CCDC78-206ENST00000463539 PCDHA12Q9UN75 941 aa21.45■■□□□ 1.02
CCDC78-206ENST00000463539 FOXN1O15353 648 aa21.44■■□□□ 1.02
CCDC78-206ENST00000463539 XRCC6P12956 609 aaKnown RBP eCLIP21.44■■□□□ 1.02
CCDC78-206ENST00000463539 STAT6P42226 847 aa21.44■■□□□ 1.02
CCDC78-206ENST00000463539 ANO6Q4KMQ2 910 aa21.44■■□□□ 1.02
CCDC78-206ENST00000463539 CHADLQ6NUI6 762 aa21.44■■□□□ 1.02
CCDC78-206ENST00000463539 ACAD9Q9H845 621 aa21.44■■□□□ 1.02
CCDC78-206ENST00000463539 RPTORQ8N122 1335 aa21.44■■□□□ 1.02
CCDC78-206ENST00000463539 POTEMA6NI47 508 aa21.43■■□□□ 1.02
CCDC78-206ENST00000463539 MDM2Q00987 491 aaPredicted RBP21.43■■□□□ 1.02
CCDC78-206ENST00000463539 CYP2W1Q8TAV3 490 aa21.43■■□□□ 1.02
CCDC78-206ENST00000463539 GJA10Q969M2 543 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms