RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 CIITAP33076 1130 aa16.36■□□□□ 0.21
COL6A1-202ENST00000463060 NASPP49321 788 aaPredicted RBP16.36■□□□□ 0.21
COL6A1-202ENST00000463060 ARHGAP4P98171 946 aa16.36■□□□□ 0.21
COL6A1-202ENST00000463060 CNTN2Q02246 1040 aa16.36■□□□□ 0.21
COL6A1-202ENST00000463060 NBR1Q14596 966 aa16.36■□□□□ 0.21
COL6A1-202ENST00000463060 PTPAQ15257 358 aa16.36■□□□□ 0.21
COL6A1-202ENST00000463060 GPR142Q7Z601 462 aa16.36■□□□□ 0.21
COL6A1-202ENST00000463060 ANKRD35Q8N283 1001 aa16.36■□□□□ 0.21
COL6A1-202ENST00000463060 C4orf32Q8N8J7 132 aa16.36■□□□□ 0.21
COL6A1-202ENST00000463060 FGD4Q96M96 766 aa16.36■□□□□ 0.21
COL6A1-202ENST00000463060 ZNF396Q96N95 335 aaPredicted RBP16.36■□□□□ 0.21
COL6A1-202ENST00000463060 FTOQ9C0B1 505 aaKnown RBP eCLIP16.36■□□□□ 0.21
COL6A1-202ENST00000463060 PXMP2Q9NR77 195 aa16.36■□□□□ 0.21
COL6A1-202ENST00000463060 RCOR1Q9UKL0 485 aa16.36■□□□□ 0.21
COL6A1-202ENST00000463060 NOL7Q9UMY1 257 aaKnown RBP16.36■□□□□ 0.21
COL6A1-202ENST00000463060 CLIC4Q9Y696 253 aa16.36■□□□□ 0.21
COL6A1-202ENST00000463060 MORC2Q9Y6X9 1032 aaPredicted RBP16.36■□□□□ 0.21
COL6A1-202ENST00000463060 SOWAHBA6NEL2 793 aa16.35■□□□□ 0.21
COL6A1-202ENST00000463060 TBC1D8O95759 1140 aa16.35■□□□□ 0.21
COL6A1-202ENST00000463060 KCTD2Q14681 263 aa16.35■□□□□ 0.21
COL6A1-202ENST00000463060 TTC38Q5R3I4 469 aa16.35■□□□□ 0.21
COL6A1-202ENST00000463060 ANO1Q5XXA6 986 aa16.35■□□□□ 0.21
COL6A1-202ENST00000463060 PPP4R3AQ6IN85 833 aa16.35■□□□□ 0.21
COL6A1-202ENST00000463060 MOXD1Q6UVY6 613 aa16.35■□□□□ 0.21
COL6A1-202ENST00000463060 PLEKHH3Q7Z736 793 aa16.35■□□□□ 0.21
COL6A1-202ENST00000463060 DNERQ8NFT8 737 aa16.35■□□□□ 0.21
COL6A1-202ENST00000463060 RMDN3Q96TC7 470 aa16.35■□□□□ 0.21
COL6A1-202ENST00000463060 MMP19Q99542 508 aa16.35■□□□□ 0.21
COL6A1-202ENST00000463060 PDCD2LQ9BRP1 358 aa16.35■□□□□ 0.21
COL6A1-202ENST00000463060 SLC15A5A6NIM6 579 aa16.34■□□□□ 0.21
COL6A1-202ENST00000463060 POTEB2H3BUK9 544 aa16.34■□□□□ 0.21
COL6A1-202ENST00000463060 TRPA1O75762 1119 aa16.34■□□□□ 0.21
COL6A1-202ENST00000463060 CTGFP29279 349 aa16.34■□□□□ 0.21
COL6A1-202ENST00000463060 KRT85P78386 507 aa16.34■□□□□ 0.21
COL6A1-202ENST00000463060 ORC2Q13416 577 aaPredicted RBP16.34■□□□□ 0.21
COL6A1-202ENST00000463060 GRB14Q14449 540 aa16.34■□□□□ 0.21
COL6A1-202ENST00000463060 SLC39A14Q15043 492 aa16.34■□□□□ 0.21
COL6A1-202ENST00000463060 PGM5Q15124 567 aa16.34■□□□□ 0.21
COL6A1-202ENST00000463060 SF3A1Q15459 793 aaKnown RBP16.34■□□□□ 0.21
COL6A1-202ENST00000463060 ZNF792Q3KQV3 632 aa16.34■□□□□ 0.21
COL6A1-202ENST00000463060 MORN1Q5T089 497 aa16.34■□□□□ 0.21
COL6A1-202ENST00000463060 LINC00301Q8NCQ3 95 aa16.34■□□□□ 0.21
COL6A1-202ENST00000463060 IL31RAQ8NI17 732 aa16.34■□□□□ 0.21
COL6A1-202ENST00000463060 USP6NLQ92738 828 aa16.34■□□□□ 0.21
COL6A1-202ENST00000463060 SAGE1Q9NXZ1 904 aa16.34■□□□□ 0.21
COL6A1-202ENST00000463060 GJD2Q9UKL4 321 aa16.34■□□□□ 0.21
COL6A1-202ENST00000463060 CFAP45Q9UL16 551 aa16.34■□□□□ 0.21
COL6A1-202ENST00000463060 CNPY2Q9Y2B0 182 aa16.34■□□□□ 0.21
COL6A1-202ENST00000463060 COBLO75128 1261 aa16.33■□□□□ 0.2
COL6A1-202ENST00000463060 YEATS4O95619 227 aa16.33■□□□□ 0.2
COL6A1-202ENST00000463060 PGK2P07205 417 aa16.33■□□□□ 0.2
COL6A1-202ENST00000463060 EDNRBP24530 442 aa16.33■□□□□ 0.2
COL6A1-202ENST00000463060 ADORA2AP29274 412 aa16.33■□□□□ 0.2
COL6A1-202ENST00000463060 MRPS9P82933 396 aaKnown RBP16.33■□□□□ 0.2
COL6A1-202ENST00000463060 ZNF174Q15697 407 aa16.33■□□□□ 0.2
COL6A1-202ENST00000463060 PCNX4Q63HM2 1172 aa16.33■□□□□ 0.2
COL6A1-202ENST00000463060 XRRA1Q6P2D8 792 aa16.33■□□□□ 0.2
COL6A1-202ENST00000463060 VSIG10LQ86VR7 867 aa16.33■□□□□ 0.2
COL6A1-202ENST00000463060 MORC4Q8TE76 937 aa16.33■□□□□ 0.2
COL6A1-202ENST00000463060 NSUN6Q8TEA1 469 aaKnown RBP16.33■□□□□ 0.2
COL6A1-202ENST00000463060 LENG9Q96B70 501 aa16.33■□□□□ 0.2
COL6A1-202ENST00000463060 IWS1Q96ST2 819 aa16.33■□□□□ 0.2
COL6A1-202ENST00000463060 EHMT1Q9H9B1 1298 aa16.33■□□□□ 0.2
COL6A1-202ENST00000463060 PLXNB2O15031 1838 aa16.33■□□□□ 0.2
COL6A1-202ENST00000463060 ZNF236Q9UL36 1845 aa16.33■□□□□ 0.2
COL6A1-202ENST00000463060 DOCK3Q8IZD9 2030 aa16.33■□□□□ 0.2
COL6A1-202ENST00000463060 IGLV3-22A0A075B6J6 115 aa16.32■□□□□ 0.2
COL6A1-202ENST00000463060 LOC102724159A0A0B4J2E5 919 aa16.32■□□□□ 0.2
COL6A1-202ENST00000463060 TDP2O95551 362 aa16.32■□□□□ 0.2
COL6A1-202ENST00000463060 NR3C2P08235 984 aa16.32■□□□□ 0.2
COL6A1-202ENST00000463060 GCFC2P16383 781 aaKnown RBP16.32■□□□□ 0.2
COL6A1-202ENST00000463060 ATP2B1P20020 1258 aa16.32■□□□□ 0.2
COL6A1-202ENST00000463060 ALDH5A1P51649 535 aaPredicted RBP16.32■□□□□ 0.2
COL6A1-202ENST00000463060 CAP1Q01518 475 aa16.32■□□□□ 0.2
COL6A1-202ENST00000463060 PWP2Q15269 919 aaKnown RBP16.32■□□□□ 0.2
COL6A1-202ENST00000463060 LETM2Q2VYF4 491 aa16.32■□□□□ 0.2
COL6A1-202ENST00000463060 Q4G0T1 1027 aa16.32■□□□□ 0.2
COL6A1-202ENST00000463060 WDR78Q5VTH9 848 aa16.32■□□□□ 0.2
COL6A1-202ENST00000463060 TMEM87AQ8NBN3 555 aa16.32■□□□□ 0.2
COL6A1-202ENST00000463060 LEO1Q8WVC0 666 aaPredicted RBP16.32■□□□□ 0.2
COL6A1-202ENST00000463060 NAP1L4Q99733 375 aaKnown RBP16.32■□□□□ 0.2
COL6A1-202ENST00000463060 SCAND2PQ9GZW5 306 aaPredicted RBP16.32■□□□□ 0.2
COL6A1-202ENST00000463060 DIS3Q9Y2L1 958 aaKnown RBP16.32■□□□□ 0.2
COL6A1-202ENST00000463060 UBIAD1Q9Y5Z9 338 aa16.32■□□□□ 0.2
COL6A1-202ENST00000463060 PCNTO95613 3336 aa16.31■□□□□ 0.2
COL6A1-202ENST00000463060 FAM86B1E9PN63 330 aa16.31■□□□□ 0.2
COL6A1-202ENST00000463060 MEIS1O00470 390 aa16.31■□□□□ 0.2
COL6A1-202ENST00000463060 CCNT1O60563 726 aaKnown RBP16.31■□□□□ 0.2
COL6A1-202ENST00000463060 IGHA2P01877 340 aa16.31■□□□□ 0.2
COL6A1-202ENST00000463060 HOXC6P09630 235 aa16.31■□□□□ 0.2
COL6A1-202ENST00000463060 FAM86B2P0C5J1 330 aa16.31■□□□□ 0.2
COL6A1-202ENST00000463060 EIF2AK2P19525 551 aaKnown RBP16.31■□□□□ 0.2
COL6A1-202ENST00000463060 UBXN2AP68543 259 aa16.31■□□□□ 0.2
COL6A1-202ENST00000463060 LACTBP83111 547 aaPredicted RBP16.31■□□□□ 0.2
COL6A1-202ENST00000463060 ATP2C1P98194 919 aaPredicted RBP16.31■□□□□ 0.2
COL6A1-202ENST00000463060 SP3Q02447 781 aa16.31■□□□□ 0.2
COL6A1-202ENST00000463060 CEBPZQ03701 1054 aaKnown RBP16.31■□□□□ 0.2
COL6A1-202ENST00000463060 PTGDRQ13258 359 aa16.31■□□□□ 0.2
COL6A1-202ENST00000463060 ARHGEF16Q5VV41 709 aa16.31■□□□□ 0.2
COL6A1-202ENST00000463060 NIPA1Q7RTP0 329 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms